G71835 (ttnb,LOC107716993,LOC107698997,LOC107601612,LOC107714355,LOC107657493)


Basic Information

Item Value
gene id G71835
gene name ttnb,LOC107716993,LOC107698997,LOC107601612,LOC107714355,LOC107657493
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 20437158 ~ 20764175 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU106440
CAGTTGATCTTTCACAACCACAGGAATAATCATTTCTTTTGGTTCACTAAGTCCAGCATGATTCTCAGCTCGAACTCTGAAAAAGTATTCTGCATTTTCCCTCAGGTTCTTAATAATGTGGGTGTTGGTTTTAACAGTGGCACATTTAACCCACTTCTGTTGGCCCTTTTCAATGGCATCAATGAGATAGCTGGTAATTCGGCTTCCACCATCATACTCTGGTTTTGACCATGCAATGGTGATGCTATTCTTTGTTACTGCAGTAACACCAAGTCTAACAGGTGGACTTGGTTTTCCTGTAATCTTGGTTCCATCTTTAGTTTCAGCAGGTACCCCTGTTCCAAACTCATTTTCTCCAGTGACTCTAAAGTAGTAGATTGCACCTTCTTGCAAGTCTTCAACCTTGTACATCAAACTGTGACAGTTGCTTGTTACACATACCCAGGCCTTTTTGCTCGCTTCACGTTTCTCAACATGATACGCCTTCACAGCATCTCCTCCATCGTTCTCTGGAGGTTCCCAAGTAACTGTAGCAGAATCTTTTGTGACTTCTGTAATTTTCACATTAGTTGGTGGTCCAGGGGTATCAAGAACTTTGACTATCATTGGCAAAGATGCTGTTCCAACACCATTGTCCAAAGTAACAATGTATTGTCCAGAATCGTTTCTTGTTGCTTTCTCAATAGTAATAGATGTGCACGTTTCTGTTGTTTCTATGCTTGCCCTAGCTTTGAGATCGACCTCCTCTTTATTCCATATAACTGAAGGCACAGGCTTTCCTTTAAATGGAGCTGTTAAAGTAAATGAATTACCATGCTTGACAATTAAAGTTTTTCGCATCTCCATGTCAATGTCAAATACAGGTTCCTCCTTTCTCTCCGTTGCTGACTGTAGCTCAGACACAGGTGACTGTTCACTGACACCAACTTTGTTGATCGCttttacagcaaaaacataCTCTACATCAGTTGTAAGACCAGAAAATGTGAATTCATTGCTTTTTGTCATCTGAATAGCCACAATCCATTCCTCATCCTCAGATTTCTTATATTCTACACTGTACCCAAGGATCTGTGCACCACCATCAGATGATGGCTTTTTCCAAGCAATAGTAATAGAATTCTTGGTATGGTCTAGAATTTTAGGTTTAGTTGGTGGGGACGGTACCAAAAGTTCATCCTCTGCCCTTGCTGAAAGAGATGGGTCACTGGCTGGACTCAATCctgctgcattttcagcataaaCTCTAAACTCATACTCACATCCTCTTCTTATTTTTGATATCACAGCTGTTAGTTCTTTCACAAGTTCCCTGTTCATGC

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: titin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106440 True 1322 TUCP 0.41 3 20437158 20764175

Neighbor

gene id symbol gene type direction distance location
lrrc3 lrrc3,LOC107714365,LOC107714364,LOC107602160,LOC107657503,LOC107584166,LOC107728914,LOC107660577 coding upstream 252991 20178303 ~ 20184167 (+)
pcbp3 pcbp3,LOC107660579,LOC107728912,LOC102308458,LOC108423908,LOC107657516,LOC108250327,LOC106920547,LOC103139210,LOC105905915,LOC106581674,LOC105007398,LOC108266078 coding upstream 268554 20114744 ~ 20168604 (+)
col18a1a LOC107660582,LOC107657518,LOC107714390,LOC107584150 coding upstream 330879 20040872 ~ 20106279 (+)
ctdsp1 ctdsp1,LOC107714388,LOC107602156,LOC107660585,LOC107657521,LOC107584167,LOC108423903,LOC103359966 coding upstream 440609 19975476 ~ 19996549 (+)
spegb speg,LOC107602155,LOC107714387,LOC107728905,LOC107657495 coding upstream 464337 19898824 ~ 19972821 (+)
LOC122351740 cherp,LOC107742793 coding downstream 394992 21159167 ~ 21168870 (+)
LOC122351537 LOC107689611,LOC107710004,LOC107590402,LOC107601255 coding downstream 406586 21170761 ~ 21178413 (+)
cwc22 cwc22,LOC107699014,LOC107676081,LOC107601622 coding downstream 477368 21241543 ~ 21279192 (+)
znf385b znf385b,LOC107699013,LOC107717003,LOC107714360 coding downstream 519212 21283387 ~ 21393731 (+)
sestd1 sestd1,LOC107699012,LOC107657508,LOC107601624,LOC107714358 coding downstream 638220 21402395 ~ 21430341 (+)
G71821 ttnb,ttn,LOC107716993,LOC107657493,LOC107601612 non-coding upstream 5847 20421155 ~ 20431311 (+)
LOC122351566 NA non-coding upstream 41966 20393679 ~ 20395192 (+)
G71705 LOC107660652,LOC107602158,LOC107728922 non-coding upstream 433372 20000796 ~ 20003786 (+)
G71638 NA non-coding upstream 634122 19777378 ~ 19803036 (+)
G71636 NA non-coding upstream 671940 19764954 ~ 19765218 (+)
G72046 ttn.2,LOC107601611,LOC107714399,LOC107657509,LOC108435065 non-coding downstream 992014 21756189 ~ 21756893 (+)
G72062 ttn.2,LOC107601611,LOC107714399,LOC107657509,LOC108435065 non-coding downstream 1002708 21766883 ~ 21768171 (+)
G72070 ttn.2,LOC107601611,LOC107714399,LOC107657509,LOC108435065 non-coding downstream 1024817 21788992 ~ 21790224 (+)
G72388 ttn.2,ttn,LOC107657509,LOC107714399,LOC107601611 non-coding downstream 1084785 21848960 ~ 21849227 (+)
G72389 ttn.2,ttnb,LOC107714399 non-coding downstream 1086843 21851018 ~ 21851291 (+)
gulp1a gulp1,gulp1a,LOC106581930,LOC107584160,LOC107717010,LOC107657514,LOC107562715,LOC107699007,LOC107714392 other upstream 74696 20348827 ~ 20362462 (+)
si:dkey-10c21.1 NA other upstream 219038 20213395 ~ 20218120 (+)
ormdl1 ormdl1,LOC107602148 other upstream 722754 19709364 ~ 19714404 (+)
G71585 NA other upstream 815665 19621284 ~ 19621493 (+)
vwc2l vwc2l,LOC107660607,LOC107657506,LOC107714362,LOC106586444 other upstream 893481 19512854 ~ 19543677 (+)
LOC122351557 znf385b,LOC107699013,LOC107717003 other downstream 216261 20980436 ~ 21050572 (+)
LOC122351742 cwc22,LOC107699014,LOC107676081,LOC107601622,LOC107562708,LOC107755368 other downstream 438970 21203145 ~ 21216426 (+)
G72034 ttn.2,LOC107714399,LOC107657509,LOC107601611,LOC108435065 other downstream 975285 21739460 ~ 21751575 (+)
G72600 NA other downstream 1886148 22650323 ~ 22650853 (+)
G72830 NA other downstream 2755867 23520042 ~ 23597986 (+)

Expression


Co-expression Network