G71842 (LOC107728921,LOC107660591,LOC107602138)


Basic Information

Item Value
gene id G71842
gene name LOC107728921,LOC107660591,LOC107602138
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 20559642 ~ 20569276 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU106451
GAAAAGCTCCTCTATCCAGTAGGTGCGCAAAGTGTTGGAATTGGTTGTGCCGTTGCTTCCAGGACTACAAGTTGTCTTCTAGCGTTATTAAAAATAGACGTTAAACCGAATTAGCTCGACAAGATTGAGATGTTACAGTTTAGGGCTTCAATTGTGCTGAAGGAGTTGATTCAAAACAGCCCAAAGCGTTCGTTTTCTGACATTATAAAGCATAAGAAGTCTTCACCAAATGCGTACATCTACAGCGCTGCTTATCCGGATGGCAGAGTATCTAAATTAAAGACTGTCTGTAATGGAAGACCTTCTATTCTGCCTTTAGCTGGGAGAAGATTCCTATGTACAAAGACCGAAGGAGCGATTGACCCTACAGAACCGGTCAAGAAAGATGAGTCCGTCCACGAAGCGACGGCAGATAAGAAGGCTGGCATCTTGCCCAGCTTGGAAGACTTGCTGTTTTACAGTATTGCTGAAGGCCAGGAGAGAATACCGGCTCACAAATTCATTACCG

Function

NR:

description
PREDICTED: glutaminase kidney isoform, mitochondrial-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106451 True 508 TUCP 0.44 2 20559642 20569276

Neighbor

gene id symbol gene type direction distance location
LOC122351546 nab1b,LOC107565022,LOC107602153,LOC107660590,LOC107714351,LOC107728906,LOC107657527 coding upstream 8002 20534078 ~ 20551640 (+)
lrrc3 lrrc3,LOC107714365,LOC107714364,LOC107602160,LOC107657503,LOC107584166,LOC107728914,LOC107660577 coding upstream 375475 20178303 ~ 20184167 (+)
pcbp3 pcbp3,LOC107660579,LOC107728912,LOC102308458,LOC108423908,LOC107657516,LOC108250327,LOC106920547,LOC103139210,LOC105905915,LOC106581674,LOC105007398,LOC108266078 coding upstream 391038 20114744 ~ 20168604 (+)
col18a1a LOC107660582,LOC107657518,LOC107714390,LOC107584150 coding upstream 453363 20040872 ~ 20106279 (+)
ctdsp1 ctdsp1,LOC107714388,LOC107602156,LOC107660585,LOC107657521,LOC107584167,LOC108423903,LOC103359966 coding upstream 563093 19975476 ~ 19996549 (+)
LOC122351548 gulp1a,LOC107717010,LOC107562715,LOC107657514,LOC107714392,LOC107584160,LOC107699007,LOC108435068,LOC108266479 coding downstream 83488 20652764 ~ 20693103 (+)
LOC122351740 cherp,LOC107742793 coding downstream 589891 21159167 ~ 21168870 (+)
LOC122351537 LOC107689611,LOC107710004,LOC107590402,LOC107601255 coding downstream 601485 21170761 ~ 21178413 (+)
cwc22 cwc22,LOC107699014,LOC107676081,LOC107601622 coding downstream 672267 21241543 ~ 21279192 (+)
znf385b znf385b,LOC107699013,LOC107717003,LOC107714360 coding downstream 714111 21283387 ~ 21393731 (+)
G71843 NA non-coding upstream 69410 20449207 ~ 20490232 (+)
G71821 ttnb,ttn,LOC107716993,LOC107657493,LOC107601612 non-coding upstream 128331 20421155 ~ 20431311 (+)
LOC122351566 NA non-coding upstream 164450 20393679 ~ 20395192 (+)
G71705 LOC107660652,LOC107602158,LOC107728922 non-coding upstream 555856 20000796 ~ 20003786 (+)
G71638 NA non-coding upstream 756606 19777378 ~ 19803036 (+)
LOC122351565 NA non-coding downstream 138885 20708161 ~ 20723283 (+)
G71879 ttnb,LOC107601612,LOC107562717,LOC107698997,LOC107657493,LOC107714355,LOC107716993 non-coding downstream 192029 20761305 ~ 20761991 (+)
G72046 ttn.2,LOC107601611,LOC107714399,LOC107657509,LOC108435065 non-coding downstream 1186913 21756189 ~ 21756893 (+)
G72062 ttn.2,LOC107601611,LOC107714399,LOC107657509,LOC108435065 non-coding downstream 1197607 21766883 ~ 21768171 (+)
G72070 ttn.2,LOC107601611,LOC107714399,LOC107657509,LOC108435065 non-coding downstream 1219716 21788992 ~ 21790224 (+)
gulp1a gulp1,gulp1a,LOC106581930,LOC107584160,LOC107717010,LOC107657514,LOC107562715,LOC107699007,LOC107714392 other upstream 197180 20348827 ~ 20362462 (+)
si:dkey-10c21.1 NA other upstream 341522 20213395 ~ 20218120 (+)
ormdl1 ormdl1,LOC107602148 other upstream 845238 19709364 ~ 19714404 (+)
G71585 NA other upstream 938149 19621284 ~ 19621493 (+)
vwc2l vwc2l,LOC107660607,LOC107657506,LOC107714362,LOC106586444 other upstream 1015965 19512854 ~ 19543677 (+)
LOC122351557 znf385b,LOC107699013,LOC107717003 other downstream 411160 20980436 ~ 21050572 (+)
LOC122351742 cwc22,LOC107699014,LOC107676081,LOC107601622,LOC107562708,LOC107755368 other downstream 633869 21203145 ~ 21216426 (+)
G72034 ttn.2,LOC107714399,LOC107657509,LOC107601611,LOC108435065 other downstream 1170184 21739460 ~ 21751575 (+)
G72600 NA other downstream 2081047 22650323 ~ 22650853 (+)
G72830 NA other downstream 2950766 23520042 ~ 23597986 (+)

Expression


Co-expression Network