G71919 (LOC107728915)


Basic Information

Item Value
gene id G71919
gene name LOC107728915
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 20215420 ~ 20218047 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU106568
tctacttacaaagaataaaagttttaaagcaGTACGAGTTcgtgtgcataaaaaaaaaaaatacaacaatttcATAAGCAACAACAAATGGAATGAAAAACAATAGGCTAAAGAAAAACGTGTCTTCATTGCATTTCCTTCATTTAATAGCATGCTGCTAATCATCTGCTAATACACAGTACAACTTTCAGTATCTCTTCAGCAGTTCATCCATTAGACGTTTTTCATGCTCACACAGAGCAGTAAACAGGTCCTTAGCAATGCTTTCACAATTCACATAGGTGAGCAGTTTCCTCATCTTATCTTGATCCGTTGGCTTCGCTCTCACATTTGCAGCTAATTCATCTTGTAGGTCGAGATCATCGATAATTGGTTCAATGCTCTTCACTTTTTGAACCAGCAGACtggtgttttcttttaaaaacatctgataAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107728915 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106568 True 435 lncRNA 0.35 2 20215420 20218047

Neighbor

gene id symbol gene type direction distance location
obsl1b obsl1b,obsl1,LOC107660652,LOC107602158,LOC107657519,LOC107728922,LOC107714352,LOC107584169,LOC108423904 coding downstream 185615 19997475 ~ 20029805 (-)
wdr75 wdr75,LOC107660592,LOC107714378,LOC107728907,LOC107657531,LOC107602136,LOC107565028 coding downstream 448627 19750542 ~ 19766793 (-)
LOC122352057 NA coding downstream 478209 19736033 ~ 19737211 (-)
asnsd1 asnsd1,LOC107728934,LOC107660596,LOC107714374 coding downstream 479299 19733900 ~ 19736121 (-)
adat3 LOC107728938,LOC107714375,LOC107681677,LOC107565014,LOC107660599,LOC107602133 coding downstream 498977 19713485 ~ 19716443 (-)
calcrla calcrla,LOC107728927,LOC107657513,LOC107602163,LOC107714396 coding upstream 30941 20248988 ~ 20270532 (-)
tfpia LOC107602164,LOC107728931,LOC107714394,LOC107660650,LOC107584163 coding upstream 53173 20271220 ~ 20295378 (-)
LOC122351553 fkbp7,LOC107562709,LOC107717008,LOC107657501,LOC107584168,LOC107714366,LOC107698996 coding upstream 183337 20401384 ~ 20403699 (-)
LOC122351723 ttn,ttnb,LOC107698997,LOC107714355,LOC107601612,LOC107716993,LOC107657493 coding upstream 193348 20411395 ~ 20417109 (-)
LOC122351724 ttn,ttnb,LOC107657493,LOC107601612,LOC107716993,LOC107698997,LOC107714355 coding upstream 199825 20417872 ~ 20421682 (-)
G71727 NA non-coding downstream 273873 19887175 ~ 19941547 (-)
G71732 NA non-coding downstream 292729 19916199 ~ 19922691 (-)
G71692 NA non-coding downstream 423860 19791247 ~ 19791560 (-)
G71645 NA non-coding downstream 503236 19709384 ~ 19712184 (-)
LOC122351289 NA non-coding downstream 534021 19674731 ~ 19681399 (-)
LOC122351563 NA non-coding upstream 78883 20296930 ~ 20302436 (-)
G71924 NA non-coding upstream 160605 20378652 ~ 20389699 (-)
LOC122351562 NA non-coding upstream 216069 20434116 ~ 20434969 (-)
G71940 NA non-coding upstream 286221 20504268 ~ 20508702 (-)
LOC122351561 NA non-coding upstream 383937 20601984 ~ 20602557 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other downstream 322105 19881550 ~ 19893315 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other downstream 362795 19833920 ~ 19852625 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other downstream 385945 19796252 ~ 19829475 (-)
ankar ankar,LOC107728908,LOC107660654 other downstream 483626 19719942 ~ 19731794 (-)
LOC122352185 NA other downstream 1645538 18569755 ~ 18569882 (-)
G71938 nab1,LOC107565022 other upstream 271117 20489164 ~ 20503890 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other upstream 1491241 21709288 ~ 21726820 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other upstream 1953416 22171463 ~ 22223667 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other upstream 2078960 22297007 ~ 22511307 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other upstream 3712160 23930207 ~ 23931329 (-)

Expression


Co-expression Network