G72372


Basic Information

Item Value
gene id G72372
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 21732308 ~ 21732996 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU107104
TATTGCATCTGTGCAATCACAGGGGCTGAATCAGTGGTCTGCTAACACCAAACCTATTGACTGCAGAAACACGGAAACTGATACTCATTTGTCTTGATCAGTTTGGTGGCAGTGTATGTGCTCGCCAAGCACTCATCTGTAACAAGTGTCCATGAAATTTTAGATGTTTCCCGCTTCTCAATAATGTAATGAGTGACCTCAGAACAACCATCATTCTCAGGTGGATTCCATGAAAGTGTTACTTTGCCCTCAGAGATATCTGAAAATGTGATTGGTCCAACTGGTTCACCAGGATTTATGGCCTCCACACTATAAACACCGCGATGACTACGGTCAGCATCTCTGATAAAGAGGGTACTTGATCCAGAAATTGTTGTAATATCAACCATTTTCTTGGTTAACTCAGTATTATCTCTGTACCAGGTAACTTTTGGTGTTGGTCTTCCTCTGATTGTCACTTTTAGCCTAATGTTTTCTCCAGCTTTAATAGAGACTCCCTCAAAGTATTCCTGTCCAAACTCAATGTTTGGAGAAA

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0042692 muscle cell differentiation biological_process
GO:0031497 chromatin assembly biological_process
GO:0048468 cell development biological_process
GO:0006323 DNA packaging biological_process
GO:0006325 chromatin organization biological_process
GO:0022607 cellular component assembly biological_process
GO:0006333 chromatin assembly or disassembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0006334 nucleosome assembly biological_process
GO:0071824 protein-DNA complex subunit organization biological_process
GO:0065004 protein-DNA complex assembly biological_process
GO:0034728 nucleosome organization biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0030154 cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0071103 DNA conformation change biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0070925 organelle assembly biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process
GO:0016043 cellular component organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107104 True 535 lncRNA 0.41 2 21732308 21732996

Neighbor

gene id symbol gene type direction distance location
LOC122351741 LOC107704498,LOC107549376 coding downstream 561533 21168939 ~ 21170775 (-)
LOC122351738 ttnb,LOC107698997,LOC107714355,LOC107657493,LOC107601612,LOC107716993,LOC107562704 coding downstream 961155 20769745 ~ 20771153 (-)
LOC122351733 ttnb,LOC107698997,LOC107716993,LOC107657493,LOC107601612 coding downstream 971281 20760046 ~ 20761027 (-)
LOC122351732 ttnb,LOC107657493,LOC107714355,LOC107601612,LOC107716993 coding downstream 975195 20755896 ~ 20757113 (-)
LOC122351558 LOC107716993,LOC107698997,LOC107601612,LOC107714355,LOC107657493 coding downstream 979328 20751269 ~ 20752980 (-)
LOC122351560 ttn,LOC107657509,LOC107714399,LOC108435065 coding upstream 11047 21744043 ~ 21896047 (-)
LOC122351744 ube2e3,LOC107601610 coding upstream 164189 21897185 ~ 21907713 (-)
neurod1 neurod1,LOC107601389,LOC107755376,LOC107676085,LOC107716998,LOC107601620 coding upstream 492562 22225558 ~ 22228499 (-)
LOC122352034 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC106582264 coding upstream 608412 22341408 ~ 22398653 (-)
LOC122351832 NA coding upstream 749230 22482226 ~ 22484709 (-)
G72260 ttn.2,LOC107714399,LOC107657509,LOC107601611,LOC108435065 non-coding downstream 116624 21607794 ~ 21615684 (-)
G72026 NA non-coding downstream 296030 21433857 ~ 21436278 (-)
G72024 NA non-coding downstream 301967 21429128 ~ 21430341 (-)
LOC122351567 NA non-coding downstream 486523 21233186 ~ 21245785 (-)
G71984 NA non-coding downstream 525546 21206215 ~ 21206762 (-)
G72377 ttnb,LOC107716993,LOC107698997,LOC107714355,LOC107601612,LOC107657493 non-coding upstream 3445 21736441 ~ 21737522 (-)
G72474 NA non-coding upstream 174003 21906999 ~ 21907385 (-)
G72479 NA non-coding upstream 209571 21942567 ~ 21942990 (-)
G72472 NA non-coding upstream 262939 21995935 ~ 22056835 (-)
G72493 NA non-coding upstream 367030 22100026 ~ 22100238 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other downstream 5488 21709288 ~ 21726820 (-)
G71938 nab1,LOC107565022 other downstream 1228418 20489164 ~ 20503890 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other downstream 1838993 19881550 ~ 19893315 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other downstream 1879683 19833920 ~ 19852625 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other downstream 1902833 19796252 ~ 19829475 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other upstream 438467 22171463 ~ 22223667 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other upstream 564011 22297007 ~ 22511307 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other upstream 2197211 23930207 ~ 23931329 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other upstream 2210989 23943985 ~ 23960325 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other upstream 2487526 24220522 ~ 24280708 (-)

Expression


Co-expression Network