G72474


Basic Information

Item Value
gene id G72474
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 21906999 ~ 21907385 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU107242
CCTCGTTCTCCTAAAGTGAAGGGGGTGGACATGCTGCGAATAGGTGCAATTATTGCTTTCCTTTGCAGCTCTTGAAATCTCCTTCTTCTCAGCGACAGATTCTGCTGGAACCGCCGTGTGTTTTCTCGTTTCCCCCTCATAAGCTCAGCCGCTTGCACCTATTCAGCAGATGGAAAGCGAAAAAACTCAAAGCTCTTTACGCGGAGGAGGGTTTTGCGAACGTGTGATGGTCGCTGCAGCTTGTAACATTAAGCGCAAAACTGATACAATGTATCTCGGATCCATGTGAAACGTCATAATGGTTGCAACATTGTTGCCGCTGCGCTATTTACAAATACTATCAGCTCAGTCGCTAATGGATTaagttggtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04724 Glutamatergic synapse
ko04720 Long-term potentiation

RNA

RNA id representative length rna type GC content exon number start site end site
TU107242 True 387 lncRNA 0.47 1 21906999 21907385

Neighbor

gene id symbol gene type direction distance location
LOC122351560 ttn,LOC107657509,LOC107714399,LOC108435065 coding downstream 10952 21744043 ~ 21896047 (-)
LOC122351741 LOC107704498,LOC107549376 coding downstream 736224 21168939 ~ 21170775 (-)
LOC122351738 ttnb,LOC107698997,LOC107714355,LOC107657493,LOC107601612,LOC107716993,LOC107562704 coding downstream 1135846 20769745 ~ 20771153 (-)
LOC122351733 ttnb,LOC107698997,LOC107716993,LOC107657493,LOC107601612 coding downstream 1145972 20760046 ~ 20761027 (-)
LOC122351732 ttnb,LOC107657493,LOC107714355,LOC107601612,LOC107716993 coding downstream 1149886 20755896 ~ 20757113 (-)
neurod1 neurod1,LOC107601389,LOC107755376,LOC107676085,LOC107716998,LOC107601620 coding upstream 318173 22225558 ~ 22228499 (-)
LOC122352034 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC106582264 coding upstream 434023 22341408 ~ 22398653 (-)
LOC122351832 NA coding upstream 574841 22482226 ~ 22484709 (-)
dusp19a dusp19a,dusp19,LOC107739447,LOC107699004,LOC107601374,LOC107601606,LOC107755360,LOC106586411 coding upstream 630590 22537975 ~ 22541710 (-)
dnajc10 dnajc10,LOC107755373,LOC107739439,LOC107699025,LOC107676092 coding upstream 690443 22597828 ~ 22610069 (-)
G72377 ttnb,LOC107716993,LOC107698997,LOC107714355,LOC107601612,LOC107657493 non-coding downstream 169477 21736441 ~ 21737522 (-)
G72372 NA non-coding downstream 174003 21732308 ~ 21732996 (-)
G72260 ttn.2,LOC107714399,LOC107657509,LOC107601611,LOC108435065 non-coding downstream 291315 21607794 ~ 21615684 (-)
G72026 NA non-coding downstream 470721 21433857 ~ 21436278 (-)
G72024 NA non-coding downstream 476658 21429128 ~ 21430341 (-)
G72479 NA non-coding upstream 35182 21942567 ~ 21942990 (-)
G72472 NA non-coding upstream 88550 21995935 ~ 22056835 (-)
G72493 NA non-coding upstream 192641 22100026 ~ 22100238 (-)
G72500 NA non-coding upstream 215805 22123190 ~ 22123408 (-)
G72502 ppp1r1c,LOC107699022,LOC107601387,LOC107716995,LOC107755374,LOC107676093 non-coding upstream 379389 22286774 ~ 22295068 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other downstream 180179 21709288 ~ 21726820 (-)
G71938 nab1,LOC107565022 other downstream 1403109 20489164 ~ 20503890 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other downstream 2013684 19881550 ~ 19893315 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other downstream 2054374 19833920 ~ 19852625 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other downstream 2077524 19796252 ~ 19829475 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other upstream 264078 22171463 ~ 22223667 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other upstream 389622 22297007 ~ 22511307 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other upstream 2022822 23930207 ~ 23931329 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other upstream 2036600 23943985 ~ 23960325 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other upstream 2313137 24220522 ~ 24280708 (-)

Expression


Co-expression Network