G72803


Basic Information

Item Value
gene id G72803
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 23256078 ~ 23277786 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU107687
GAAAGACAAGAGAGGGCCTCCGGAGAGCTCCACTGCCTTGCAGGATCCTACTCCGTCCTAGCTTTTATTAGTCTTGGAACGGACGACCTGTTGCATATTCTGAAGGGTGCTTTTAACCTCCCGCCCGTGAGGTCATGATCGGTCTCCAGAGCGACTTCTTTTGGAAGAAAGGATCAGATCAATTAACCACAGGCGGATGATCTGCCgTGTTTGGActccattctgacggcacccattcactgcagaagaccCATTGGTGAACGACTAAATCTCTCTCAAAACCCGatgtgatgaagaaacaaactagaTTCTAGATTTTTGATGGCCTGatgCAGCGGTCGCAATGGAACAGAGTTTTGCGGTTCTTCAAATTTTCTCCTTTCTTGTTTACTGGAGCAAAAACATTCTATGGATTTCAGAGCGACATTgCACACTTCTGCTTCTGACATCAGTCTAGACATCGGGACCTGTGGAAAACACGacacattatacatttaatgcGCTGTTTAGAACGCATCAGATGTATTTTACATGACTACTGGAGCAAAGTGCATCTGTTGTGTGAAAGG

Function

GO:

id name namespace
GO:0042440 pigment metabolic process biological_process
GO:0051186 obsolete cofactor metabolic process biological_process
GO:0042168 heme metabolic process biological_process
GO:0046148 pigment biosynthetic process biological_process
GO:0033013 tetrapyrrole metabolic process biological_process
GO:0033014 tetrapyrrole biosynthetic process biological_process
GO:0006778 porphyrin-containing compound metabolic process biological_process
GO:0006779 porphyrin-containing compound biosynthetic process biological_process
GO:0006783 heme biosynthetic process biological_process
GO:0005215 transporter activity molecular_function
GO:0004418 hydroxymethylbilane synthase activity molecular_function

KEGG:

id description
ko00860 Porphyrin and chlorophyll metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU107687 True 569 lncRNA 0.46 4 23256078 23277786

Neighbor

gene id symbol gene type direction distance location
hdac4 hdac4,LOC107560613,LOC107601379,LOC107741589 coding downstream 11831 23005838 ~ 23244247 (-)
agr1 agr1,LOC107718316,LOC107692342,LOC107601372,LOC107754004,LOC107695966,LOC107560612 coding downstream 349766 22902448 ~ 22906312 (-)
itgb2 LOC107699026,LOC107739438,LOC107601382,LOC107676087,LOC107601617,LOC107755371 coding downstream 610331 22636895 ~ 22645747 (-)
vil1 vil1,LOC107699006,LOC107676071,LOC107755365,LOC107601613,LOC107739444 coding downstream 620081 22622058 ~ 22635997 (-)
LOC122351761 LOC107601373,LOC107755372,LOC107739445,LOC107601614,LOC107601364,LOC107739440 coding downstream 635290 22616864 ~ 22620788 (-)
LOC122352042 LOC107704822,LOC107739717,LOC107688954,LOC107601359,LOC107741586,LOC107601360 coding upstream 3728 23281514 ~ 23290139 (-)
LOC122351748 LOC107601359,LOC107704822,LOC107741586,LOC107739717,LOC107688954,LOC107601360 coding upstream 112906 23390692 ~ 23410990 (-)
gjc4b cx43.4,LOC107704825,LOC107741582,LOC107601378,LOC107688946,LOC107739588 coding upstream 141476 23419262 ~ 23426434 (-)
LOC122352061 igfbp5b,LOC107656526,LOC107719877,LOC107601375,LOC107739616,LOC107567302 coding upstream 286593 23564379 ~ 23649560 (-)
LOC122351749 NA coding upstream 438323 23716109 ~ 23717055 (-)
G72795 NA non-coding downstream 252338 23003397 ~ 23003740 (-)
G72780 NA non-coding downstream 314062 22941815 ~ 22942016 (-)
G72646 NA non-coding downstream 364459 22828098 ~ 22891619 (-)
G72615 NA non-coding downstream 555059 22700729 ~ 22701019 (-)
G72608 NA non-coding downstream 588967 22666897 ~ 22667111 (-)
LOC122352044 NA non-coding upstream 30701 23308487 ~ 23350941 (-)
G72816 NA non-coding upstream 60908 23338694 ~ 23344034 (-)
LOC122352045 NA non-coding upstream 83226 23361012 ~ 23380056 (-)
LOC122352046 NA non-coding upstream 102372 23380158 ~ 23387077 (-)
G72881 NA non-coding upstream 156390 23434176 ~ 23434476 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other downstream 744771 22297007 ~ 22511307 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other downstream 1032411 22171463 ~ 22223667 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other downstream 1529258 21709288 ~ 21726820 (-)
G71938 nab1,LOC107565022 other downstream 2752188 20489164 ~ 20503890 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other downstream 3362763 19881550 ~ 19893315 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other upstream 652421 23930207 ~ 23931329 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other upstream 666199 23943985 ~ 23960325 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other upstream 942736 24220522 ~ 24280708 (-)
G73201 NA other upstream 1749799 25027585 ~ 25030965 (-)
G73301 NA other upstream 2070992 25348778 ~ 25349640 (-)

Expression


Co-expression Network