G72918


Basic Information

Item Value
gene id G72918
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 23558753 ~ 23634077 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU107903
AAGCAACAGTAAAGCACTTATGATCGACACACTTGAAAGCCTTATTGATCAAATGCGATAGAATGAGACTAGTGATAGAATCACTTGATCTTATTTGTAAAGCTACTATCAATTCTCGGTCATCAATGGCATGAAAATATTAAGCGcttaattaaaacttaattaaacaTTACGTTTTGCATGATACACTTTCCACATTTCATAATAAAGTAATTCAAACTATTAAATAGCATAAATGGGATTATATGAATTATGCATTAACCACAGCATTATCCTAGGATGCTATTTAAACGATATTAAAACGGTTCACAAACATGCTGTCAGATCATCAGTTCATCATTCGTAGCAATATCTCAGCAATATTTTCAAACATGCTTTTACTGCATAATGCATGCAtatgcattaacaaaaaaacaatgttaatatCTGTATAAACCACCGTAATCATAAAGAAAAGGTGTATATGTTTGCACGTAATCACATGTGTGCAAACACAGTCATACATACGCTACAGTCATATGGTCAGTCCACTCGGAATCTATGACATGCACGCATTGTTCGTCTGCTAATTCAGTTGTCTTCATTGATGAATCAGGATTTGGGTGATTAACAGAGGAGCCCAGAGGAACTCGGCATTACAGGATACAGGTTTATTTTGGGTGAAGACTTACTGCATTTAAACTCTGCCCAGAGGCAAGGCACCTGGCTTTCCACAGAAGTCAAAGAGATTGCTCAGGAACAAGGAAGTCATTTACCAAGAGCCCCAACTTCAAGGGGGATCTCTGACCGGCAGAAAGGACCGACATCTCCATTCAAATAAGTGAGGACAGTACAGATAGATAATGTGGAGCCATGTTTTATCACAAACCCCCCGGGCACGTTAGCACAACATTTCATGACTGAGCATCAAGCCAAAAAGGCAAAAGTGCCACTGATAAGAGCCTATTTTGCAAAAGATTGTTAATAAACAGGTTGAGAGTGCATTTCTAACATGTTTTCTCGGGAGTTCAGAGCCAAACCTCTACTAGTAGTGTTGCCTCTTCTCTGCCGATTCattgtgtgcattttatttttaaatgtgatgtgAAATAGGTCTTGGATAGCGGGTTGGAGTCTGGCGAGACTTTAGTCGCCTCGAGGTAATCACTAATGCAGACATACAGGTGAAGCTCTTCCTGGGATAACTCAGGTTTACGGACTCCAGATGTGACGGATCAGGGCTTTGTCCGCAGTCAAGCAGCATTCATTTGTAAGAGCCAGATCAAGTAAGGGGAAACGAAGCAGACATACAGGTGAAGCTCTTCCTGGGATAACTCAGGTTTACGGACTCCAGATGTGACGGATCAGGGCTTTGTCCGCAGTCAAGCAGCATTCATTTGTAAGAGCCAGATCAAGTAAGGGGAAACGAAGCAGACCCAGAGAGGAACACGTGTCGGCGATTTGATTTGTGGGGCAGTGAACATGACAATTACTATAGCCTTCAAAGAAACTGACAACTGCATTTTAGACTTCAAAGCACTCACATCTCTTTTATCACGCAATTAGCTAAACAACTATAGATGGCTCCATCTTATCACAACATGTGGCTCTCCACACCACTCTTTCGCCTCAGAACACAATGATTAGAGTTTAGCGTTTCA

Function

GO:

id name namespace
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism molecular_function
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism molecular_function

KEGG:

id description
ko04911 Insulin secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU107903 True 1640 lncRNA 0.41 2 23558753 23634077

Neighbor

gene id symbol gene type direction distance location
gjc4b cx43.4,LOC107704825,LOC107741582,LOC107601378,LOC107688946,LOC107739588 coding downstream 132319 23419262 ~ 23426434 (-)
LOC122351748 LOC107601359,LOC107704822,LOC107741586,LOC107739717,LOC107688954,LOC107601360 coding downstream 147763 23390692 ~ 23410990 (-)
LOC122352042 LOC107704822,LOC107739717,LOC107688954,LOC107601359,LOC107741586,LOC107601360 coding downstream 268614 23281514 ~ 23290139 (-)
hdac4 hdac4,LOC107560613,LOC107601379,LOC107741589 coding downstream 314506 23005838 ~ 23244247 (-)
agr1 agr1,LOC107718316,LOC107692342,LOC107601372,LOC107754004,LOC107695966,LOC107560612 coding downstream 652441 22902448 ~ 22906312 (-)
LOC122351749 NA coding upstream 82032 23716109 ~ 23717055 (-)
LOC122351750 igfbp2b,LOC107601376,LOC107719878,LOC107656525,LOC107739679,LOC107688948,LOC107567301 coding upstream 280604 23914681 ~ 23918652 (-)
cobll1b cobll1,LOC107674769,LOC107755205 coding upstream 347893 23981970 ~ 24029114 (-)
slc38a11 slc38a11,LOC107674763,LOC107677901 coding upstream 395432 24029509 ~ 24038130 (-)
csrnp3 csrnp3,LOC107674773,LOC107722915,LOC107755203,LOC107677900 coding upstream 508589 24142666 ~ 24193802 (-)
G72909 NA non-coding downstream 18650 23537504 ~ 23540103 (-)
G72889 NA non-coding downstream 86025 23472413 ~ 23472728 (-)
G72881 NA non-coding downstream 124277 23434176 ~ 23434476 (-)
LOC122352046 NA non-coding downstream 171676 23380158 ~ 23387077 (-)
LOC122352045 NA non-coding downstream 178697 23361012 ~ 23380056 (-)
G72923 NA non-coding upstream 277376 23911453 ~ 23912036 (-)
G72927 NA non-coding upstream 278096 23912173 ~ 23913886 (-)
G72929 NA non-coding upstream 292146 23926223 ~ 23981238 (-)
G72980 NA non-coding upstream 619285 24253362 ~ 24285690 (-)
G72984 NA non-coding upstream 647914 24281991 ~ 24284165 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other downstream 1047446 22297007 ~ 22511307 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other downstream 1335086 22171463 ~ 22223667 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other downstream 1831933 21709288 ~ 21726820 (-)
G71938 nab1,LOC107565022 other downstream 3054863 20489164 ~ 20503890 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other downstream 3665438 19881550 ~ 19893315 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other upstream 296130 23930207 ~ 23931329 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other upstream 309908 23943985 ~ 23960325 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other upstream 586445 24220522 ~ 24280708 (-)
G73201 NA other upstream 1393508 25027585 ~ 25030965 (-)
G73301 NA other upstream 1714701 25348778 ~ 25349640 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G58700 NA non-coding CI01000009 null 14957124 ~ 14958723 (+)