G72923


Basic Information

Item Value
gene id G72923
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 23911453 ~ 23912036 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU107908
GGCACAGTAAATTTTACGGTAGCTCGAGTTTGGCCTAGTTTAAAAACAGTGCGAAACCAATCCCTGTGGTTTTCGGGCATATTGATTTGCCAGAGCGGTTCCAATGGGATGGAAGTGTtcacgtatgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtttgtgtgtatttgtgtgaacGTTTCGATGCTGTGCCATGCCTGGAGCCAGTGTGACGGTGGGAAGGATTGCTTGCCATCTGGTGCAGTGTAAAACTGTCAGAGCCGGTCTCTGCTTTTGGAGAGTCTCACACAAATGACAGGGGGAATTTCTTGAGCAAATCCAAATGCCTTTTGCCATGCCAGCATCTCACatgcctttttttctgtaattcatTGCGTATCCTGTGTGTCACGAGATGCGGTGGtattaaataacatacattACTCAGAGCATGCTCCTTGTGTCCACTGTCATGCGAATGGTGCATGAATTGAGTTTTCTGTACAACTGCAATGGAAAAAgccataaatgcatgcaaaaatagaCATTGGTTTTAAAATCTTGTAATAAAATCCAGCATGATTAAATGTATTACCTTTCAGAC

Function

GO:

id name namespace
GO:0005520 insulin-like growth factor binding molecular_function
GO:0019838 growth factor binding molecular_function
GO:0031995 insulin-like growth factor II binding molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU107908 True 584 lncRNA 0.43 1 23911453 23912036

Neighbor

gene id symbol gene type direction distance location
LOC122351749 NA coding downstream 194398 23716109 ~ 23717055 (-)
LOC122352061 igfbp5b,LOC107656526,LOC107719877,LOC107601375,LOC107739616,LOC107567302 coding downstream 261893 23564379 ~ 23649560 (-)
gjc4b cx43.4,LOC107704825,LOC107741582,LOC107601378,LOC107688946,LOC107739588 coding downstream 485019 23419262 ~ 23426434 (-)
LOC122351748 LOC107601359,LOC107704822,LOC107741586,LOC107739717,LOC107688954,LOC107601360 coding downstream 500463 23390692 ~ 23410990 (-)
LOC122352042 LOC107704822,LOC107739717,LOC107688954,LOC107601359,LOC107741586,LOC107601360 coding downstream 621314 23281514 ~ 23290139 (-)
LOC122351750 igfbp2b,LOC107601376,LOC107719878,LOC107656525,LOC107739679,LOC107688948,LOC107567301 coding upstream 2645 23914681 ~ 23918652 (-)
cobll1b cobll1,LOC107674769,LOC107755205 coding upstream 69934 23981970 ~ 24029114 (-)
slc38a11 slc38a11,LOC107674763,LOC107677901 coding upstream 117473 24029509 ~ 24038130 (-)
csrnp3 csrnp3,LOC107674773,LOC107722915,LOC107755203,LOC107677900 coding upstream 230630 24142666 ~ 24193802 (-)
stk39 stk39,LOC107707604,LOC107708317,LOC107558608 coding upstream 513490 24425526 ~ 24482087 (-)
G72918 NA non-coding downstream 277376 23558753 ~ 23634077 (-)
G72904 NA non-coding downstream 310561 23598987 ~ 23600892 (-)
G72909 NA non-coding downstream 371350 23537504 ~ 23540103 (-)
G72889 NA non-coding downstream 438725 23472413 ~ 23472728 (-)
G72881 NA non-coding downstream 476977 23434176 ~ 23434476 (-)
G72927 NA non-coding upstream 137 23912173 ~ 23913886 (-)
G72929 NA non-coding upstream 14187 23926223 ~ 23981238 (-)
G72980 NA non-coding upstream 341326 24253362 ~ 24285690 (-)
G72984 NA non-coding upstream 369955 24281991 ~ 24284165 (-)
G73077 NA non-coding upstream 601058 24513094 ~ 24521308 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other downstream 1400146 22297007 ~ 22511307 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other downstream 1687786 22171463 ~ 22223667 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other downstream 2184633 21709288 ~ 21726820 (-)
G71938 nab1,LOC107565022 other downstream 3407563 20489164 ~ 20503890 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other downstream 4018138 19881550 ~ 19893315 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other upstream 18171 23930207 ~ 23931329 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other upstream 31949 23943985 ~ 23960325 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other upstream 308486 24220522 ~ 24280708 (-)
G73201 NA other upstream 1115549 25027585 ~ 25030965 (-)
G73301 NA other upstream 1436742 25348778 ~ 25349640 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) G53428 NA non-coding CM030126.1 CM030126.1 18131480 ~ 18131785 (-)