G72980


Basic Information

Item Value
gene id G72980
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 24253362 ~ 24285690 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU108005
CTGCAATATTATGATGCTTGACTGTGACTTCTGATTAACTTAATGCACCCTGGTTGAATAAACACATCAGTTTCAAGAAAACACACTATAAAGAAAAGACTGAATGCTAGTGTGCGtcttatttactcatttttccACAGCACAAACAAGAAGAAGAGAGCTCACGTACCGCTTGATTACGACCCTTCTCCTTTCCCGTCCTGCTGGTGCTGATGAGAGTATTTTGAAGTCTTGAAGCCGCCGCCGCTGTAAAAGAGCGCCGACTGTTCCAGCTTCCATCAATCTAACACTTCTCCCTCAGGCGACCGTACAGCAAGAGCTATTGATTTACAACAGTCTTAGGGGTTTGCTTAAACACTACACCTTGAAATTCTCACTGTGAGTGATGCTGAGGGATTCCTGTTAAAGCACGGTTACAGCAGAAACGCAGTTGACCAGCAGTTCATGTGATCACGTGTCAGCACCGCTCACTTCAAAAGTCTCTCGTCGATTCTCAGAAGAGGAAGGTTATGCTTGATGAAAAGCGTTTTCGAGTAAAACACTACACCGctgtgctaaaaaaataaaaatagcctcAATGCACTAAAGTGCAAACTCTCAACACAACCAGACAAGCAATCCTTAAGAAATATAAAGAGCGTGCGGGTTTTAAAGCACTAGAGTAAAGAATTTATTTTACTCACTCgtataaaatgaagaaattaaacCGAACGCATAAACGGTGATATCaatatgtctttattttaattgcatcaaTAAATTAGCAAGAACCAACCCGACTTAATTTAACCATCAGGGATTGTCCAGTACAAATCATAGAAGACAACTCTAAAAAGATCATTTTCCTCACAAAATATTTTCGGTTTAGAGAGAGAAGGACATACACTTCTATTATAAACAAGACAAGAGATTTAcaaatatgtgttttgtttgtcttcCTCCCACACAACACTCCAGGTGCTGCACaggaagaagaaaaggaaaaaaaaaacGTTGACTTT

Function

GO: NA

KEGG:

id description
ko00710 Carbon fixation in photosynthetic organisms

RNA

RNA id representative length rna type GC content exon number start site end site
TU108005 True 1001 lncRNA 0.39 2 24253362 24285690

Neighbor

gene id symbol gene type direction distance location
csrnp3 csrnp3,LOC107674773,LOC107722915,LOC107755203,LOC107677900 coding downstream 59560 24142666 ~ 24193802 (-)
slc38a11 slc38a11,LOC107674763,LOC107677901 coding downstream 215232 24029509 ~ 24038130 (-)
cobll1b cobll1,LOC107674769,LOC107755205 coding downstream 224248 23981970 ~ 24029114 (-)
LOC122351750 igfbp2b,LOC107601376,LOC107719878,LOC107656525,LOC107739679,LOC107688948,LOC107567301 coding downstream 334710 23914681 ~ 23918652 (-)
LOC122351749 NA coding downstream 536307 23716109 ~ 23717055 (-)
stk39 stk39,LOC107707604,LOC107708317,LOC107558608 coding upstream 139836 24425526 ~ 24482087 (-)
spc25 spc25,LOC107707602,LOC107564152,LOC107677909,LOC107708316,LOC107674771,LOC107566753 coding upstream 243982 24529672 ~ 24533048 (-)
abcb11a abcb11a,LOC107677906,LOC107674755,LOC107564151,LOC106581787,LOC107744834 coding upstream 248187 24533877 ~ 24558743 (-)
lrp2a lrp2a,lrp2 coding upstream 286172 24571862 ~ 24667167 (-)
fastkd1 NA coding upstream 431920 24717610 ~ 24727730 (-)
G72929 NA non-coding downstream 272124 23926223 ~ 23981238 (-)
G72927 NA non-coding downstream 339476 23912173 ~ 23913886 (-)
G72923 NA non-coding downstream 341326 23911453 ~ 23912036 (-)
G72918 NA non-coding downstream 619285 23558753 ~ 23634077 (-)
G72904 NA non-coding downstream 652470 23598987 ~ 23600892 (-)
G73077 NA non-coding upstream 227404 24513094 ~ 24521308 (-)
G73084 rdh1,LOC107566765,LOC107744825,LOC107674762,LOC106581784 non-coding upstream 279191 24564881 ~ 24571112 (-)
G73160 NA non-coding upstream 453636 24739326 ~ 24745938 (-)
G73175 NA non-coding upstream 490470 24776160 ~ 24778655 (-)
G73179 NA non-coding upstream 515348 24801038 ~ 24801377 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other downstream 293037 23943985 ~ 23960325 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other downstream 322033 23930207 ~ 23931329 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other downstream 1742055 22297007 ~ 22511307 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other downstream 2029695 22171463 ~ 22223667 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other downstream 2526542 21709288 ~ 21726820 (-)
G73201 NA other upstream 741895 25027585 ~ 25030965 (-)
G73301 NA other upstream 1063088 25348778 ~ 25349640 (-)
G73300 LOC107577510,LOC107663597,LOC107729051,LOC107728259,LOC107661178 other upstream 1170724 25456414 ~ 25458742 (-)
G73347 NA other upstream 1504827 25790517 ~ 25793056 (-)
LOC122351758 LOC107663860,LOC107722919,LOC107561565,LOC107585695,LOC107675138 other upstream 1508393 25794083 ~ 25853303 (-)

Expression


Co-expression Network