G73077



Basic Information


Item Value
gene id G73077
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 24513094 ~ 24521308 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU108125
TGtcgtgtttatttaaaatacatggcAACATAATTCATTAGTACCGCTGATAATCAGTTTTCCAGCAAAGGCAGAAAATACAGtcgtcttttttttcttttctttttttaatcttcgcCTTTTGACATCAAATGTAAACCACATAACACAGCAACCTGTCTGCAGTGCAAATAAGACGACGGCTAATTAGCTGTAGCGCTTCTCCAGCTCGAAacagacagcagcagcaacCTTCCCAACACCGAAAGAAACGGCATCAAAACACTcgaatcaaaagtaaaaaaaaaaaaaaaaaaaaagctcggCTGAATGATGATCAAATGCGTGAGGAAAACCGGAAGAATCTTTTATTCTGAACtcaaaaaagctaattaaaaaaaaacacaacataacaataacaaatgacCAGTGTTTGGTGCCACTTACTCATCAAAGTGCAAGTATGTTCATTCAAACAGTGATAGTTTGATATATTCCGTAATCTCATATGTACCTTTATTATGAAGTGCGGGCACAATAATAAAAGCGATCCTATTTTGAAATACGACTGTGATTCATTGAGAAATGATTATCAAATATAACCACTTGATGATAAATTTCACCGTTTATTTCAGGTGAAATCGCTTTGAAATACtttcctggaaaaaaaacaacactttctGTTAAAACACGTTCCTTAAAAGAAGCAGATTTTGTTTCAGCGCCGAAACGCCGACACAGGTACACTATCATTccgaagacttttattttgaaagaagtgaGTACTTTTATTCGGCAAGAACGCATTCGACTGCAGATTcgaaatatttctgtttcaaataaacgtGGTCTTAAAATCTTCCGTTCGACGAAGAGTCCCGAAAAGGCATCGCTAACgcgtttccacaaaaacatgaaCCGTTTTCGAcgctgataataagaaatgtttcttgagcagcgaatcagcgtattagaacgACGACTGCGGTAACGACGCTGAAAATccacaggaataaaatacatttttatatttaaccgAATAGACAAGTTATTTTTGATCGAATGAATGCAGCCTCGTTGACCAGAAGACACCTTTTCGTCTTTTGAATGATAGTGTGCTTGTGAAAATATGTTTGGAATGCCACCGATTTGTCACGAATGAATAAATTGACCGGCTGCCATTTTAAAACACCGTCACCCCATTTCCACGAAAACGATGCTGTTGCTCGTGTCGGAGCTGATGCTCGGCTGGAGAACGGGAGAAGCTCTCGGTTTAAGTCATGGAAGTGATTGTTACAGCATACCctttctgcaaaaaaataaaaattacagcgCATCGCTATGCTTAAATGTGGTGTCGGAAGTTGCCATGcagtcacaaaaataaaaccagcgTGCTCACAAGATAAGAGTCGTCCGGTTTTGTCTGGGATAATCAAAAGTAGATGTTTGGATGTGATTTAAGCAGATTTAAGGCCACGAGCATTACATGCAAACGCGAATGCAGATCAGATCAGTGTTTTTACCTCCGTTCTGAACAGTTCCTACGACTGTTGTGAAATGCCTTTAATTTCTTGGTCATACAAACGTTACCAGTCCGTTTTGTAACGTTGCAAACATTGTGGGAAGATTACAGATCTGAACATCCAAATACGAATATTGAATAATCGGTATTtcaggggagaaaaaaaaatcacgcaTAGTATATCATCATGCTATTTTTGCTAATATTATTAAGGATCAAACAGCAAACACTGTATTACGGTTACTGGAAGAACGTTTCATCATAACGTTTGACTGAAGTTATGAGAAGTTACTGCTATCTGTACTAGTACTGTAAACTGTCAGTAGCTAACTAGTTTAAAAGGTTCAACTAACTTACAAgagtctgtaaaaaaaaaaatgcatttttttttgtaatgcgcAAAATCAAGTATTTAACTTTCAGGTAACACTACACATACATtcacattagttaatgtattatttaacgtgaatgaacaatgaacactacatttattatactctttattaatgtttgttaatgttaagttataaaaaatacagtcgTTCATTGTTAGTTCGTCGTAGTTCACGGTGTATTGTCGACAAATACAACTTGtggtttttaataatgcattggtaaatgctgaaattaacaatTAAGATTAATAGTTGCATTTCTCATTATTAGTTCACGTCAACTAACGAAGCTTGTTGCAAAGCGTTAACGGCGTTCACGTACAGTACTTGCATAAGGTTATATTTGGATAGACCTTTGTGGATGcttgtgtaattattttgtaaagtaACATTCCCATAATGTTTAAAAcgtattaaatgaaatgttctgGTAACATTTGCaaaacgaagaaaaaaaaaaatatatatatatatatatataa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU108125 True 2384 lncRNA 0.35 2 24513094 24521308

Neighbor


gene id symbol gene type direction distance location
stk39 stk39,LOC107707604,LOC107708317,LOC107558608 coding downstream 31007 24425526 ~ 24482087 (-)
csrnp3 csrnp3,LOC107674773,LOC107722915,LOC107755203,LOC107677900 coding downstream 319292 24142666 ~ 24193802 (-)
slc38a11 slc38a11,LOC107674763,LOC107677901 coding downstream 474964 24029509 ~ 24038130 (-)
cobll1b cobll1,LOC107674769,LOC107755205 coding downstream 483980 23981970 ~ 24029114 (-)
LOC122351750 igfbp2b,LOC107601376,LOC107719878,LOC107656525,LOC107739679,LOC107688948,LOC107567301 coding downstream 594442 23914681 ~ 23918652 (-)
spc25 spc25,LOC107707602,LOC107564152,LOC107677909,LOC107708316,LOC107674771,LOC107566753 coding upstream 8364 24529672 ~ 24533048 (-)
abcb11a abcb11a,LOC107677906,LOC107674755,LOC107564151,LOC106581787,LOC107744834 coding upstream 12569 24533877 ~ 24558743 (-)
lrp2a lrp2a,lrp2 coding upstream 50554 24571862 ~ 24667167 (-)
fastkd1 NA coding upstream 196302 24717610 ~ 24727730 (-)
ccdc173 ccdc173,LOC107596564,LOC107677915,LOC107564134,LOC107577048,LOC107744830 coding upstream 207060 24728368 ~ 24733782 (-)
G72980 NA non-coding downstream 227404 24253362 ~ 24285690 (-)
G72984 NA non-coding downstream 228929 24281991 ~ 24284165 (-)
G72929 NA non-coding downstream 531856 23926223 ~ 23981238 (-)
G72927 NA non-coding downstream 599208 23912173 ~ 23913886 (-)
G72923 NA non-coding downstream 601058 23911453 ~ 23912036 (-)
G73084 rdh1,LOC107566765,LOC107744825,LOC107674762,LOC106581784 non-coding upstream 43573 24564881 ~ 24571112 (-)
G73160 NA non-coding upstream 218018 24739326 ~ 24745938 (-)
G73175 NA non-coding upstream 254852 24776160 ~ 24778655 (-)
G73179 NA non-coding upstream 279730 24801038 ~ 24801377 (-)
LOC122351686 NA non-coding upstream 291008 24812316 ~ 24821062 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other downstream 232386 24220522 ~ 24280708 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other downstream 552769 23943985 ~ 23960325 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other downstream 581765 23930207 ~ 23931329 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other downstream 2001787 22297007 ~ 22511307 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other downstream 2289427 22171463 ~ 22223667 (-)
G73201 NA other upstream 506277 25027585 ~ 25030965 (-)
G73301 NA other upstream 827470 25348778 ~ 25349640 (-)
G73300 LOC107577510,LOC107663597,LOC107729051,LOC107728259,LOC107661178 other upstream 935106 25456414 ~ 25458742 (-)
G73347 NA other upstream 1269209 25790517 ~ 25793056 (-)
LOC122351758 LOC107663860,LOC107722919,LOC107561565,LOC107585695,LOC107675138 other upstream 1272775 25794083 ~ 25853303 (-)

Expression



Co-expression Network