G73351


Basic Information

Item Value
gene id G73351
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 25860328 ~ 25862412 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU108534
atgattcagGTGATAAATAATTCGTGGTTttctgaaaaatacatttgtcagctcactaggttttagGACACGGCCCATGATTGCATTCATTAcaggaaaacctttttttttttttttttttttttttttttttttcaactcaaAAATCTAGTTTATTAAGGCTTTATTGGTTAATTTGTCTTCCAAAAGACTGTGTTTTTGACCTGGTGGGTCTTGTTGACCGGTTATCTACCTCAGAGTTTTGTTGTCCTCTGTTTTGATTGGTCGGGCAGCAGGTTCAGCCCGCCCCTCCAGACCAAACGGCCAGCTCAGGAGCGGCCCACGTACACTTGATttctttcaggttttttttgtttttaagtactttaatcctcttcttcttcttcttctccttcaaacggaatttttttgttttgttttatgattctTCTTATCGTTATAAGGAAAGTTGTGCGTTGAACGTGTCGTTTTAGTGTCGTATAGCATTCAGATTCATCGTTTcgaaagcaaaaaacaaaaactgctgCTTTTCATCACAAGATATTCCAGTAGTCCATAGGAAGTAGACAAGGAAGTGCGCGCGAGAGAGAGACGGAGCCAATGAGAAACAGCGATTCTGAGAGTTTTCCCGAGACGTCACTGTTGTGTGGAAGCTTCTTTCTGTCACcgaataaatttttattataaattttttttaaaaataaaaatcattgcGACTTTTTCTCTCACAATGCAGACTTTTTTCCCTtcactaattttttttttcttaatttgaattttgattCTCAAGTTTATACGGCGAGTTAACAATTtctaattctgactttttactTAGAATTttgagttaaattaaaaacctcacaattcttGTTTAATTCTTGTAATTCAATTTTTTtgggatttctttttttggaattttgagttaaattaaaaacctCACAATTCTTGTTTAATTCTtctaattcaaattttttttagaatcttTTTTTGGAATTTCGAGTTTGTCTTGCAGTTCTTTTTCCCCCCCATCACAAAATAAAGACCggtttttactttatatatcttttttttttttttttacccagatTTGTGATTTCTATACCGTCTCCAtcatggaataaaaaaaatacaatgggtaaatgcaactttttatcgaccttttttttcacagaattgcaagtttatattcTGTAACTGCAAGTCAACATCACATGATTCTGGCTTTTTGCTCAGAAAAAGCTATTGTAAATGTAGAGCTTGCACGATGCAAACTCACaataatttagaaatgacaagaattttttttttttttttatcccgtGTAGGAAAGCAGCTTCCATACTGTTACTTTCAGAGCGAGTCCAGACAGACTTTAATCCGTGGTGCTCCGCTCACAGCCGAGTCCATTCTTGACGTGcatgctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtggagTTCTTGTGTGGCTCATGCTGCTAGTAACATCCGAATCCGAAGTGCCAATCTGTGTCTGGGTCAAAGAGTTGGAAAGACTTGTTGTGCAGAGAGAAATTGCTCATGAATATGAAAAATCATGTACTAGACAGCCATTAAgttatatgaaaaaaagtaataatttatgAAGAGAGACGTTTTGTACAGActgtttgaaaaaagaaaaccaataaAAAGATTTTCATAGAGATGTCTATATGAGagttgattttgttttacaCGTGCCACGCTCTTGCCGGTGGTATCCTGTATGTTCGCTTTATCAGAAACCTTCCtctgtatttgtttctttttgtttcctgAGTGTTTGTTTAAgccaaaaaaagctttttttccctccctgtTCCCCTTTGTTTCCAGTAGATTGTTAATTAAGctttatttctgttcatttctttgaaaactttggaataaaaa
>TU108535
ctcaaAAATCTAGTTTATTAAGGCTTTATTGGTTAATTTGTCTTCCAAAAGACTGTGTTTTTGACCTGGTGGGTCTTGTTGACCGGTTATCTACCTCAGAGTTTTGTTGTCCTCTGTTTTGATTGGTCGGGCAGCAGGTTCAGCCCGCCCCTCCAGACCAAACGGCCAGCTCAGGAGCGGCCCACGTACACTTGATttctttcaggttttttttgtttttaagtactttaatcctcttcttcttcttcttctccttcaaacggaatttttttgttttgttttatgattctTCTTATCGTTATAAGGAAAGTTGTGCGTTGAACGTGTCGTTTTAGTGTCGTATAGCATTCAGATTCATCGTTTcgaaagcaaaaaacaaaaactgctgCTTTTCATCACAAGATATTCCAGTAGTCCATAGGAAGTAGACAAGGAAGTGCGCGCGAGAGAGAGACGGAGCCAATGAGAAACAGCGATTCTGAGAGTTTTCCCGAGACGTCACTGTTGTGTGGAAGCTTCTTTCTGTCACcgaataaatttttattataaattttttttaaaaataaaaatcattgcGACTTTTTCTCTCACAATGCAGACTTTTTTCCCTtcactaattttttttttcttaatttgaattttgattCTCAAGTTTATACGGCGAGTTAACAATTtctaattctgactttttactTAGAATTttgagttaaattaaaaacctcacaattcttGTTTAATTCTTGTAATTCAATTTTTTtgggatttctttttttggaattttgagttaaattaaaaacctCACAATTCTTGTTTAATTCTtctaattcaaattttttttagaatcttTTTTTGGAATTTCGAGTTTGTCTTGCAGTTCTTTTTCCCCCCCATCACAAAATAAAGACCggtttttactttatatatcttttttttttttttttacccagatTTGTGATTTCTATACCGTCTCCAtcatggaataaaaaaaatacaatgggtaaatgcaactttttatcgaccttttttttcacagaattgcaagtttatattcTGTAACTGCAAGTCAACATCACATGATTCTGGCTTTTTGCTCAGAAAAAGCTATTGTAAATGTAGAGCTTGCACGATGCAAACTCACaataatttagaaatgacaagaattttttttttttttttatcccgtGTAGGAAAGCAGCTTCCATACTGTTACTTTCAGAGCGAGTCCAGACAGACTTTAATCCGTGGTGCTCCGCTCACAGCCGAGTCCATTCTTGACGTGcatgctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtggagTTCTTGTGTGGCTCATGCTGCTAGTAACATCCGAATCCGAAGTGCCAATCTGTGTCTGGGTCAAAGAGTTGGAAAGACTTGTTGTGCAGAGAGAAATTGCTCATGAATATGAAAAATCATGTACTAGACAGCCATTAAgttatatgaaaaaaagtaataatttatgAAGAGAGACGTTTTGTACAGActgtttgaaaaaagaaaaccaataaAAAGATTTTCATAGAGATGTCTATATGAGagttgattttgttttacaCGTGCCACGCTCTTGCCGGTGGTATCCTGTATGTTCGCTTTATCAGAAACCTTCCtctgtatttgtttctttttgtttcctgAGTGTTTGTTTAAgccaaaaaaagctttttttccctccctgtTCCCCTTTGTTTCCAGTAGATTGTTAATTAAGctttatttctgttcatttctttgaaaactttggaataaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108534 True 1934 lncRNA 0.35 2 25860328 25862412
TU108535 False 1796 lncRNA 0.35 2 25860328 25862274

Neighbor

gene id symbol gene type direction distance location
LOC122351834 LOC107572957,LOC107663596,LOC107573769,LOC107728255,LOC107661170,LOC108265697 coding downstream 397479 25459895 ~ 25462849 (-)
gpbar1 LOC107656509,LOC107564146,LOC107688960,LOC107739693,LOC107596586 coding downstream 1052547 24803623 ~ 24807781 (-)
zgc:92380 zgc:92380,LOC107656510,LOC107564128,LOC107688951,LOC107739632 coding downstream 1063274 24789506 ~ 24797054 (-)
LOC122351587 NA coding downstream 1074091 24784903 ~ 24786237 (-)
LOC122351585 LOC107656512,LOC107744835,LOC107596607,LOC107739743,LOC107688961,LOC107564147 coding downstream 1088069 24768285 ~ 24772259 (-)
LOC122352035 rbms1,LOC107675130,LOC107730583,LOC107663836,LOC107722911 coding upstream 341 25862753 ~ 25919696 (-)
gcgb gcgb,gcg,LOC107730589,LOC107677918,LOC107722905,LOC107674768,LOC105907977 coding upstream 202800 26065212 ~ 26067013 (-)
LOC122351282 fap,LOC107563829,LOC107722901,LOC107677917,LOC107561562 coding upstream 205826 26068238 ~ 26080787 (-)
ifih1 ifih1,LOC107722900,LOC107563828,LOC107730588,LOC107561563 coding upstream 219736 26082148 ~ 26104816 (-)
G73350 NA non-coding downstream 13532 25834317 ~ 25846796 (-)
LOC122351247 NA non-coding downstream 109939 25744021 ~ 25750389 (-)
G73305 cdo1,LOC102791980 non-coding downstream 383390 25472266 ~ 25476938 (-)
G73302 NA non-coding downstream 470513 25351063 ~ 25389815 (-)
LOC122351187 NA non-coding downstream 765529 25092636 ~ 25094799 (-)
G73308 NA non-coding upstream 82989 25945401 ~ 25965894 (-)
G73379 slc4a10,LOC107722898,LOC107674766,LOC107730592 non-coding upstream 181752 26044164 ~ 26045413 (-)
G73385 NA non-coding upstream 192455 26054867 ~ 26062832 (-)
LOC122351758 LOC107663860,LOC107722919,LOC107561565,LOC107585695,LOC107675138 other downstream 7025 25794083 ~ 25853303 (-)
G73347 NA other downstream 67272 25790517 ~ 25793056 (-)
G73300 LOC107577510,LOC107663597,LOC107729051,LOC107728259,LOC107661178 other downstream 401586 25456414 ~ 25458742 (-)
G73301 NA other downstream 510688 25348778 ~ 25349640 (-)
G73201 NA other downstream 829363 25027585 ~ 25030965 (-)
LOC122351579 LOC107563831,LOC107730593,LOC107677922,LOC107674758,LOC107722906 other upstream 244245 26106657 ~ 26187631 (-)
fign fign,LOC107730568,LOC107722902,LOC107677893,LOC107674765,LOC107600675 other upstream 409964 26272376 ~ 26331126 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037455 NA non-coding NC_007120.7 CM002893.2 51765534 ~ 51775942 (+)
grasscarp (Ctenopharyngodon idella) G321248 NA non-coding CI01000108 null 935616 ~ 989647 (-)