Item | Value |
---|---|
gene id | fign |
gene name | fign,LOC107730568,LOC107722902,LOC107677893,LOC107674765,LOC107600675 |
gene type | misc |
species | tiger barb (Puntius tetrazona) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_056707.1 |
NCBI id | CM032076.1 |
chromosome length | 26426558 |
location | 26272376 ~ 26331126 (-) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
symbol | description |
---|---|
fign | Predicted to enable ATP hydrolysis activity and microtubule-severing ATPase activity. Predicted to be involved in cytoplasmic microtubule organization. Predicted to act upstream of or within cell division. Predicted to be located in cytoplasm; microtubule cytoskeleton; and nuclear matrix. Predicted to be active in nucleus. Is expressed in central nervous system; lens placode; and somite. Orthologous to human FIGN (fidgetin, microtubule severing factor). |
description |
---|
Fidgetin |
id | name | namespace |
---|---|---|
GO:0016363 | nuclear matrix | cellular_component |
GO:0005815 | microtubule organizing center | cellular_component |
GO:0005874 | microtubule | cellular_component |
GO:0005737 | cytoplasm | cellular_component |
GO:0005524 | ATP binding | molecular_function |
GO:0017111 | nucleoside-triphosphatase activity | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU108650 | False | 2180 | lncRNA | 0.36 | 1 | 26272687 | 26274866 |
XM_043248150.1 | False | 7425 | mRNA | 0.42 | 2 | 26272376 | 26330226 |
XM_043248151.1 | True | 7470 | mRNA | 0.42 | 2 | 26272376 | 26331126 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
ifih1 | ifih1,LOC107722900,LOC107563828,LOC107730588,LOC107561563 | coding | downstream | 167560 | 26082148 ~ 26104816 (-) |
LOC122351282 | fap,LOC107563829,LOC107722901,LOC107677917,LOC107561562 | coding | downstream | 191589 | 26068238 ~ 26080787 (-) |
gcgb | gcgb,gcg,LOC107730589,LOC107677918,LOC107722905,LOC107674768,LOC105907977 | coding | downstream | 205363 | 26065212 ~ 26067013 (-) |
LOC122352035 | rbms1,LOC107675130,LOC107730583,LOC107663836,LOC107722911 | coding | downstream | 352680 | 25862753 ~ 25919696 (-) |
LOC122351834 | LOC107572957,LOC107663596,LOC107573769,LOC107728255,LOC107661170,LOC108265697 | coding | downstream | 809527 | 25459895 ~ 25462849 (-) |
G73385 | NA | non-coding | downstream | 209544 | 26054867 ~ 26062832 (-) |
G73379 | slc4a10,LOC107722898,LOC107674766,LOC107730592 | non-coding | downstream | 226963 | 26044164 ~ 26045413 (-) |
G73308 | NA | non-coding | downstream | 306482 | 25945401 ~ 25965894 (-) |
G73351 | NA | non-coding | downstream | 409964 | 25860328 ~ 25862412 (-) |
G73350 | NA | non-coding | downstream | 425580 | 25834317 ~ 25846796 (-) |
LOC122351579 | LOC107563831,LOC107730593,LOC107677922,LOC107674758,LOC107722906 | other | downstream | 84745 | 26106657 ~ 26187631 (-) |
LOC122351758 | LOC107663860,LOC107722919,LOC107561565,LOC107585695,LOC107675138 | other | downstream | 419073 | 25794083 ~ 25853303 (-) |
G73347 | NA | other | downstream | 479320 | 25790517 ~ 25793056 (-) |
G73300 | LOC107577510,LOC107663597,LOC107729051,LOC107728259,LOC107661178 | other | downstream | 813634 | 25456414 ~ 25458742 (-) |
G73301 | NA | other | downstream | 922736 | 25348778 ~ 25349640 (-) |