G66751


Basic Information

Item Value
gene id G66751
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 866832 ~ 870006 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU98783
tgcagtgaaacccccggagggtgtatttattaggcaatacacagaaggtgagcagTGAGTTCGGGGAGTCCGAGGCGTGCGATGCgtgcagcggtgagtccgggggtggtgtagcggtgagtccggtgagtgcagcggtgagtcgtctcggtgCTTCCAGGGCTTAATATCGTGAGGGAGTCTGCAGTGAGGgagtaggggaagtagctcaggcaggcccgtcacgtagtcgcttctggg

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:0043603 cellular amide metabolic process biological_process
GO:0043604 amide biosynthetic process biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:1901566 organonitrogen compound biosynthetic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0009059 macromolecule biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:0043627 response to estrogen biological_process
GO:1901576 organic substance biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0071391 cellular response to estrogen stimulus biological_process
GO:0010467 gene expression biological_process
GO:0044249 cellular biosynthetic process biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0044267 cellular protein metabolic process biological_process
GO:0044271 cellular nitrogen compound biosynthetic process biological_process
GO:0006518 peptide metabolic process biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0034645 cellular macromolecule biosynthetic process biological_process
GO:0016900 oxidoreductase activity, acting on the CH-OH group of donors, disulfide as acceptor molecular_function
GO:0047057 vitamin-K-epoxide reductase (warfarin-sensitive) activity molecular_function

KEGG:

id description
ko03010 Ribosome
ko04141 Protein processing in endoplasmic reticulum

RNA

RNA id representative length rna type GC content exon number start site end site
TU98783 True 240 lncRNA 0.60 2 866832 870006

Neighbor

gene id symbol gene type direction distance location
LOC122351437 NA coding upstream 44454 805144 ~ 822378 (+)
LOC122351407 LOC107569775 coding upstream 486808 378075 ~ 380024 (+)
LOC122351404 sema5b,sema5ba,LOC107661137,LOC107660660,LOC108261041,LOC107597557 coding upstream 727157 47876 ~ 139675 (+)
LOC122351660 NA coding downstream 29624 899630 ~ 907921 (+)
LOC122351648 LOC107686979,LOC107709150,LOC107670647 coding downstream 40025 910031 ~ 933338 (+)
LOC122351656 LOC107700959,LOC107711456,LOC107558461 coding downstream 178408 1048414 ~ 1058016 (+)
LOC122351655 LOC107700959,LOC107700956,LOC107558461,LOC107711456,LOC107733036 coding downstream 197011 1067017 ~ 1079247 (+)
LOC122351657 LOC107746587 coding downstream 361167 1231173 ~ 1239023 (+)
G66742 NA non-coding upstream 10653 855656 ~ 856179 (+)
G66741 NA non-coding upstream 12642 852912 ~ 854190 (+)
LOC122351670 NA non-coding upstream 24496 842002 ~ 842336 (+)
G66733 NA non-coding upstream 42520 823957 ~ 824312 (+)
G66731 NA non-coding upstream 49847 816765 ~ 816985 (+)
G66761 NA non-coding downstream 66252 936258 ~ 936612 (+)
G66763 NA non-coding downstream 97604 967610 ~ 968141 (+)
G66765 NA non-coding downstream 102173 972179 ~ 972508 (+)
G66744 LOC107686979,LOC107558465,LOC107684617,LOC107560491,LOC107709150 non-coding downstream 114453 984459 ~ 1003564 (+)
G66767 LOC107709150,LOC107670647,LOC107733035,LOC107686979 non-coding downstream 121455 991461 ~ 1016307 (+)
G66727 fam126b,LOC107700963 other upstream 61823 797133 ~ 805009 (+)
G66657 NA other upstream 404803 459574 ~ 462029 (+)
G66795 NA other downstream 257520 1127526 ~ 1134989 (+)
bpifcl bpi other downstream 843806 1713812 ~ 1736320 (+)
LOC122351419 polr2e,polr2eb,LOC107592678,LOC107669821,LOC107599482 other downstream 2324767 3194773 ~ 3196618 (+)
LOC122351398 dnajc15,LOC107549910 other downstream 2392601 3262607 ~ 3280052 (+)
LOC122352174 rbm45,LOC107716918,LOC107752596 other downstream 3043632 3913638 ~ 3922878 (+)

Expression


Co-expression Network