CI01000000_01680507_01690297 (CPLX2, CPLX1, CPLX1.L)


Basic Information

Item Value
gene id CI01000000_01680507_01690297
gene name CPLX2, CPLX1, CPLX1.L
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1680507 ~ 1691194 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_01680507_01690297.mRNA
GAGCGACCAAAGACATGGGGAAAATGCTGGGGGGCGAGGAGGAGAAGGACCCTGATGCTGAGAGAAAGGAGGAAGAAAGACAGGAAGCCCTCAGGCAACAGGAGGAGGAGAGGAAGGCAAAGTATGCAAAAATGGAAGCGGAGAGGGAATCGATTCGACAGGGCATCAGGGACAAGTATGGTATAAAGAAGAAGGAAGAAAAGGAGGCAGAAGCCCAAGCAGCCATGGAGCAGGCGTCAGAGGGTAGTCTGACCCGCCCCAAGAAAGCAATCCCTGCTGGCTGCGGCAATGAAGAGGAGGAGGAGGAAAGCATCGTGGACACCGTCATGAAGTTCCTCCCAGGCCCGCTTCAAGATATGTTCAATAAAAAGTAACAGCATTCCACGACAAGTCGTGATAAAAACGGGAATCATTAATGTCATGAAAGCCACTTCCTCTTTCCCCTTCCCCTCTCTCATTTGTTCTAAGATCTCTGGATTCAAAACGTGTGCCATAACATCTGTCTTTAACTGCGATACATGTGACATTTTTTGATGAAAAGAATGAGGAAAAATACAATCTGTGCACTAGAAATGTTACATTGCATACGCTCTGCTTGAAGACAAATTTAATGCCCCCTGAGTCCAGACCTTAGAACAAGAATATTCCCCATGCTTCATTAATTTTGTTTGTAAATAGCAAATGAAAAAATAGCTGTATATGACTTTAGGATATATATATATATATATATATATATATATATATATAAACAATGACTATGAGTAAAAGCCATAAATTTATCTTGGAGGGATTTCTCCAATCATATCATATTTTTGATTGTTGCTCTGTTATAGATATAATTGATAAATCCATGTGGTATACCTAGAGATATATACTGTATACAGATTCATTTAACATCCATACATCAAACTAGTATACAGTTGCTGCCATCATGAATTGTCACATTGTATCCGACTGAAAACTGTAATATGTAAGAGAACGTACACTATCACATGATTTGGCTGTTTTGCTGTTTGCTCTAAGCATAATAACATTTTTTTTTTCTTTATCAGTACACTGTATCCAATTTCCTTCGGCGTTTTTAGCTGAAATACACTAAAATTTAAGGCAATAACTCTGGTTTTGGATTTTGTTGTCCGACATAAACCAGTGTTAAATGGCATATTGCTCACATCTATATAGATCTTCCTTTTGAGAAAAGTAAACTATACGTCCCTCACTACATCGTCACGCACATTCACATCACACTCTAGTAAACTGGATTTCACTGA

Function

symbol description
cplx2 Predicted to enable SNARE binding activity. Predicted to be involved in regulation of neurotransmitter secretion and synaptic vesicle exocytosis. Predicted to act upstream of or within exocytosis and neurotransmitter transport. Predicted to be located in synapse. Predicted to be part of SNARE complex. Predicted to be active in terminal bouton. Orthologous to human CPLX2 (complexin 2).
cplx1 Predicted to enable SNARE binding activity. Predicted to be involved in regulation of neurotransmitter secretion and synaptic vesicle exocytosis. Predicted to be located in neuronal cell body. Predicted to be part of SNARE complex. Predicted to be active in several cellular components, including Schaffer collateral - CA1 synapse; glutamatergic synapse; and terminal bouton. Implicated in developmental and epileptic encephalopathy 63.

GO:

id name namespace
GO:0043303 mast cell degranulation biological_process

KEGG:

id description
K15294 CPLX1_2; complexin-1/2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_01680507_01690297.mRNA True 1271 mRNA 0.39 2 1680507 1691194

Neighbor

gene id symbol gene type direction distance location
CI01000000_01511690_01517631 IKBKAP coding upstream 162788 1511690 ~ 1517719 (+)
CI01000000_01459294_01485147 SLC44A1 coding upstream 195196 1459294 ~ 1485311 (+)
CI01000000_01405606_01410241 NIPSNAP3A coding upstream 270004 1405606 ~ 1410503 (+)
CI01000000_01347674_01352321 NA coding upstream 327279 1347674 ~ 1353228 (+)
CI01000000_01209256_01229839 NA coding upstream 450148 1208489 ~ 1230359 (+)
CI01000000_01848610_01851296 NA coding downstream 156349 1847543 ~ 1851898 (+)
CI01000000_01879407_01879559 NA coding downstream 188213 1879407 ~ 1879980 (+)
CI01000000_01898604_01899281 NA coding downstream 206848 1898042 ~ 1899281 (+)
CI01000000_01899373_01901550 TSTD2 coding downstream 208179 1899373 ~ 1901682 (+)
CI01000000_01916310_01925119 NA coding downstream 224858 1916052 ~ 1925390 (+)
G428 NA non-coding upstream 190160 1487224 ~ 1490347 (+)
G520 NA non-coding upstream 276373 1403153 ~ 1404134 (+)
G503 NA non-coding upstream 285887 1394342 ~ 1394620 (+)
G517 NA non-coding upstream 288123 1391396 ~ 1392384 (+)
G576 NA non-coding downstream 15576 1706770 ~ 1706985 (+)
G593 NA non-coding downstream 42053 1733247 ~ 1734389 (+)
G579 NA non-coding downstream 76723 1767917 ~ 1908808 (+)
G645 NA non-coding downstream 151128 1842322 ~ 1843168 (+)
G699 NA non-coding downstream 227538 1918732 ~ 1918942 (+)
G435 NA other upstream 247653 1425121 ~ 1432854 (+)
G350 NA other upstream 1003570 671842 ~ 676937 (+)
G252 NA other upstream 1173435 503209 ~ 507072 (+)
G2774 NA other downstream 2762584 4453778 ~ 4454232 (+)
G2850 NA other downstream 3034792 4725986 ~ 4726482 (+)
G6811 NA other downstream 8513637 10204831 ~ 10321679 (+)
G6820 NA other downstream 8736029 10427223 ~ 10433018 (+)

Expression


Co-expression Network