CI01000000_01879407_01879559


Basic Information

Item Value
gene id CI01000000_01879407_01879559
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1879407 ~ 1879980 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_01879407_01879559.mRNA
ATGGCAGGCCTATGTGCTCTGGGCACCTGCTGCTTTGTTGGCTTTTTCCACACGGATTACCGGAGACTCCGTGCGGAAGCCACAGCCTCACCAAAGACAGTGACAGACCAGTCAACAGGAGGAGACACCTGGGCAAACAGCACAGATGCATAAAGAGACGAGCTGATCTAACAAGGAGAGAAACCACTGATGACAGTGTTTACGCACACTTTAAAAAGACTTTTACCTCATTTACACTGAAAGGATGTGCCTTAAATGCTAGTTTGTTTTACTTAGAAGTGGTACTACCTCAACCTCCATTAATGTTACATAAAACCTCGTTATGCACAAAAGCATTTGTTTCTGTTAAAGAAACAGAATAGATTAAGGTACAAACTTTTAACCAAAACCAAATGTTTTATGCAATTTTAATCTCAAATGTTTTTATTGCAAAAAAAGGGTACAGAAAGATTTCTAACTGTTATTAAACGCATTTTTTACTATAGTTATTTTATGAGGCAAGTAGGTAGTTAGAAATTAAAAGTTAGCAACTAAGGCTATTAGTTATTTAATGAAAGAGATATATTTGAGTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_01879407_01879559.mRNA True 574 mRNA 0.37 1 1879407 1879980

Neighbor

gene id symbol gene type direction distance location
CI01000000_01848610_01851296 NA coding upstream 27509 1847543 ~ 1851898 (+)
CI01000000_01680507_01690297 CPLX2, CPLX1, CPLX1.L coding upstream 188213 1680507 ~ 1691194 (+)
CI01000000_01511690_01517631 IKBKAP coding upstream 361688 1511690 ~ 1517719 (+)
CI01000000_01459294_01485147 SLC44A1 coding upstream 394096 1459294 ~ 1485311 (+)
CI01000000_01405606_01410241 NIPSNAP3A coding upstream 468904 1405606 ~ 1410503 (+)
CI01000000_01898604_01899281 NA coding downstream 18062 1898042 ~ 1899281 (+)
CI01000000_01899373_01901550 TSTD2 coding downstream 19393 1899373 ~ 1901682 (+)
CI01000000_01916310_01925119 NA coding downstream 36072 1916052 ~ 1925390 (+)
CI01000000_01978179_01992602 PPP2R2BB, PPP2R2B, PPP2R2B.L coding downstream 98199 1978179 ~ 1992961 (+)
CI01000000_01996254_01997531 GPR151 coding downstream 116094 1996074 ~ 1997617 (+)
G645 NA non-coding upstream 36239 1842322 ~ 1843168 (+)
G593 NA non-coding upstream 145018 1733247 ~ 1734389 (+)
G576 NA non-coding upstream 172422 1706770 ~ 1706985 (+)
G428 NA non-coding upstream 389060 1487224 ~ 1490347 (+)
G699 NA non-coding downstream 38752 1918732 ~ 1918942 (+)
G700 NA non-coding downstream 39276 1919256 ~ 1919564 (+)
G710 NA non-coding downstream 143781 2023761 ~ 2023971 (+)
G717 NA non-coding downstream 158053 2038033 ~ 2038258 (+)
G718 NA non-coding downstream 158497 2038477 ~ 2038716 (+)
G435 NA other upstream 446553 1425121 ~ 1432854 (+)
G350 NA other upstream 1202470 671842 ~ 676937 (+)
G252 NA other upstream 1372335 503209 ~ 507072 (+)
G2774 NA other downstream 2573798 4453778 ~ 4454232 (+)
G2850 NA other downstream 2846006 4725986 ~ 4726482 (+)
G6811 NA other downstream 8324851 10204831 ~ 10321679 (+)
G6820 NA other downstream 8547243 10427223 ~ 10433018 (+)
G7018 NA other downstream 9098509 10978489 ~ 10980872 (+)

Expression


Co-expression Network