LOC122351398 (dnajc15,LOC107549910)


Basic Information

Item Value
gene id LOC122351398
gene name dnajc15,LOC107549910
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 3262607 ~ 3280052 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU99543
AGGTCGATCGCATTCCACTTATGGAGGCCTCTGGGTCAGGTGATTACAGAAGCTGCTAAGAAGTTACCCTCTGCGTCGTTTTCTGCATATTACAAAGGTGGATTTGAGCAGAAGATGACCAGACGGGAAGCCAGCCTTATTCTCGGGATCAGTCCGACCAGCACCAAGACCAAGGTACGGGAAGCCCACAGAAGGATCATGGTCCTAAATCATCCAGATAAAGGTGGATCCCCGTATTTGGCAGCAAAGATCAATGAAGCAAAAGATCTTCTTGACTCTGGCCCTCGGCGCTGACCCAGCTTGCCCGATCTACCCCAACAGAGAGTTACATCTACTTCAGAGCCGCCAACTCACCCACGAGCCTCCACAAGTCATTGTTCTCCTCCGTGTTTTTCTGCCATAAATCAGCCAGCTCTTAGCATACTCCTCTCCATTCCATCCCTCACTGTTCCCCACCACCGCTTTAATACAAGTCGGCATAGTTGGATTCTTCACGTTAAAGGATCTTCACGCTGTCCTTGCGAAATATCTCACGGCAGCCTTTATTATTTATCGAGGTGACTTGTGTAATGTTCAACGTCTCCTGAAAACGGCGGATGTGTCATTTCCGGTGGTCTGAAAGGCCTAAAGTGCGTAGGTGTTAAGTTATTTTAGCATGCTGAATAAACCG
>TU99544
CGACTATATGCCACAGATCTGCTGTTGATAGAGCTTGACTTTGAATTCGTAtcattgttttcaacattttctcTTCTTTCCTAGTCGTTTTCTGCATATTACAAAGGTGGATTTGAGCAGAAGATGACCAGACGGGAAGCCAGCCTTATTCTCGGGATCAGTCCGACCAGCACCAAGACCAAGGTACGGGAAGCCCACAGAAGGATCATGGTCCTAAATCATCCAGATAAAGGTGGATCCCCGTATTTGGCAGCAAAGATCAATGAAGCAAAAGATCTTCTTGACTCTGGCCCTCGGCGCTGACCCAGCTTGCCCGATCTACCCCAACAGAGAGTTACATCTACTTCAGAGCCGCCAACTCACCCACGAGCCTCCACAAGTCATTGTTCTCCTCCGTGTTTTTCTGCCATAAATCAGCCAGCTCTTAGCATACTCCTCTCCATTCCATCCCTCACTGTTCCCCACCACCGCTTTAATACAAGTCGGCATAGTTGGATTCTTCACGTTAAAGGATCTTCACGCTGTCCTTGCGAAATATCTCACGGCAGCCTTTATTATTTATCGAGGTGACTTGTGTAATGTTCAACGTCTCCTGAAAACGGCGGATGTGTCATTTCCGGTGGTCTGAAAGGCCTAAAATGCCTGTCTGCTCTGCACATCTGCCGGAGCGGCTGGGATTGGACAGAGGGACGTTCTGTACGCCATCACTTGGACTGCTGATTTGCCGTTTGTCAGACCGAGATTAATGCCAAGGACAAGGATACTGCAACACGAGCTGCACAAACCAGTTACACATTGCTGCAAGAGGAAGAAAAGGCGAGCATCGGTGACAGAATCTGCTTTTAGGATGCATTTTACATGTTatttcctttagaaatcatttcgAGCTACATTCCGACTAGAGCATTAGCTTGTGACTGCTGCTTGCTCTATTTTATAATAGCTAGTAATATGAAGACATTAATCCACCATAACTAAGCATACAATTTCAAACAGTGGTGTGCTTTGTTACTGTTAAATGACCTCATTATGTTAGATGTGAGTGACATCCCGTCTTCAGTGATGTCTATAGATGTGGttataatgaatttttaatgctctttcatgcaaaaaaatctgacatGCATTTgaccataatttttttttaataaatttaagtaATAGTTAATATTAACCACAGATAAGATAAGGGTTTGGTTTAGTGTTTCTTGCATCTAAATATGCATGATTTATCGCTATTATAATAGTAAGCACATGTAGCGTGTAACAAGGAGACCTTCAAAAATCTActt
>XM_043248461.1
ATGGCGACGGCGATGAGGGTGATGGTTAAGCCACTCTTACTGTCGATCGCATTCCACTTATGGAGGCCTCTGGGTCAGGTGATTACAGAAGCTGCTAAGAAGTTACCCTCTGCGTCGTTTTCTGCATATTACAAAGGTGGATTTGAGCAGAAGATGACCAGACGGGAAGCCAGCCTTATTCTCGGGATCAGTCCGACCAGCACCAAGACCAAGGTACGGGAAGCCCACAGAAGGATCATGGTCCTAAATCATCCAGATAAAGGTGGATCCCCGTATTTGGCAGCAAAGATCAATGAAGCAAAAGATCTTCTTGACTCTGGCCCTCGGCGCTGACCCAGCTTGCCCGATCTACCCCAACAGAGAGTTACATCTACTTCAGAGCCGCCAACTCACCCACGAGCCTCCACAAGTCATTGTTCTCCTCCGTGTTTTTCTGCCATAAATCAGCCAGCTCTTAGCATACTCCTCTCCATTCCATCCCTCACTGTTCCCCACCACCGCTTTAATACAAGTCGGCATAGTTGGATTCTTCACGTTAAAGGATCTTCACGCTGTCCTTGCGAAATATCTCACGGCAGCCTTTATTATTTATCGAGGTGACTTGTGTAATGTTCAACGTCTCCTGAAAACGGCGGATGTGTCATTTCCGGTGGTCTGAAAGGCCTAAAGTGCGTAGGTGTTAAGTTATTTTAGCATGCTGAATAAACCGTTTTACAAATGGA

Function

symbol description
dnajc15 Predicted to enable ATPase activator activity. Predicted to be involved in protein import into mitochondrial matrix. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of PAM complex, Tim23 associated import motor. Orthologous to human DNAJC15 (DnaJ heat shock protein family (Hsp40) member C15).

GO:

id name namespace
GO:0048793 pronephros development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99543 False 670 lncRNA 0.49 4 3263497 3279327
TU99544 True 1292 lncRNA 0.42 4 3266991 3280052
XM_043248461.1 False 722 mRNA 0.48 5 3262607 3279340

Neighbor

gene id symbol gene type direction distance location
enox1 enox1,LOC107661308,LOC107713727,LOC107561323,LOC107688647 coding upstream 124662 3054362 ~ 3137945 (+)
tsc22d1 tsc22d1,LOC107551985,LOC107748883,LOC107713726,LOC107576221,LOC107561310,LOC107688650 coding upstream 246098 2978307 ~ 3016509 (+)
kctd4 kctd4,LOC107748885,LOC107688678,LOC107713709,LOC107580010 coding upstream 294642 2966046 ~ 2967965 (+)
vgll3 LOC107561316 coding upstream 332187 2926366 ~ 2930420 (+)
pou1f1 pou1f1,LOC107561319,LOC107688653,LOC107661330,LOC107551978 coding upstream 354474 2899163 ~ 2908133 (+)
epsti1 epsti1,LOC107549908 coding downstream 83682 3363734 ~ 3384177 (+)
vwa8 vwa8 coding downstream 227873 3507925 ~ 3584691 (+)
mycbp2 mycbp2,LOC107549765,LOC107664005 coding downstream 390510 3670562 ~ 3742739 (+)
fbxl3a fbxl3,fbxl3a,LOC107549764,LOC107664003,LOC107670904 coding downstream 463954 3744006 ~ 3752623 (+)
rsph1 rsph1,LOC107749034,LOC107728239,LOC107670901,LOC107663994 coding downstream 474764 3754816 ~ 3759215 (+)
G67296 NA non-coding upstream 209385 3052494 ~ 3053222 (+)
LOC122351258 NA non-coding upstream 305409 2955344 ~ 2957198 (+)
LOC122351269 NA non-coding upstream 337971 2917842 ~ 2924636 (+)
G67187 NA non-coding upstream 608131 2641619 ~ 2654476 (+)
G67097 NA non-coding upstream 1130211 2131962 ~ 2132396 (+)
G67347 NA non-coding downstream 105578 3385630 ~ 3385950 (+)
G67348 NA non-coding downstream 106920 3386972 ~ 3387192 (+)
G67389 NA non-coding downstream 139035 3419087 ~ 3424421 (+)
G67396 NA non-coding downstream 157045 3437097 ~ 3441744 (+)
LOC122351351 NA non-coding downstream 306751 3586803 ~ 3592240 (+)
LOC122351419 polr2e,polr2eb,LOC107592678,LOC107669821,LOC107599482 other upstream 65989 3194773 ~ 3196618 (+)
bpifcl bpi other upstream 1526287 1713812 ~ 1736320 (+)
G66795 NA other upstream 2127618 1127526 ~ 1134989 (+)
LOC122351650 si:ch1073-55a19.2,LOC107670647,LOC107709149,LOC107686982,LOC107559216,LOC108440489,LOC107686979,LOC107709150 other upstream 2363228 858680 ~ 899379 (+)
G66727 fam126b,LOC107700963 other upstream 2457598 797133 ~ 805009 (+)
LOC122352174 rbm45,LOC107716918,LOC107752596 other downstream 633586 3913638 ~ 3922878 (+)
G67566 LOC107742952,LOC107718452,LOC107671286,LOC107715667 other downstream 667984 3948036 ~ 3983582 (+)
cdca7a LOC107718452,LOC107671286,LOC107588247,LOC107742973,LOC107657370,LOC107600694 other downstream 701294 3981346 ~ 3985962 (+)
scrn3 scrn3,LOC107739455,LOC107671317,LOC107588231,LOC107657366,LOC107600698 other downstream 840475 4120527 ~ 4127013 (+)
G67630 NA other downstream 861002 4141054 ~ 4222171 (+)

Expression


Co-expression Network