G67358 (gpx4a)


Basic Information

Item Value
gene id G67358
gene name gpx4a
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 3189847 ~ 3194492 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU99606
TAAAGTGGTTATTATTTAGAACAGTTCGTATCAAAGAACCGATTCGCGAAAAGATTCGGTGATTCATTTGTCGTCTcgtattgcatttttaaaaacctttaaataaagcatgaaGACACGCCGTGCTGTTATTATATTGTCCCATCAAGTATGTCTTATTAATTAACGGAAGTTTATTGTAATTTCACGAGTCAGTACGAATCGTGATGTTTCATGAGCGAATCAGTTCAACCGATTCACTGAAAAGAGCCGACTCAAAGGAAGTGTTTATCTGCTGGACTTTGCGAAGCGAGAAGATAAAACATGGCCTTTTATACATCGTTTCTTGCTGTTCGGGGCTTTATCGAGCAGTGGGATCATTGGTGCAATGtctgcACAGCTCGAGGACTGGCAGTTGGCCAAATCTATTTATGAATTTACGGTCACGGATATAGACGGCAACGACGTTTCCCTGGAAAAATACAGgGGGAACGTTGTCATCATCACTAACGTTGCCTCAAAGTGAGGCAAAACCCCGGTAAACTACTCTCAGTTTGCAGAAATGCACGCCAAATGTACGCTGAGAGAGGTTTAAGCATCCTGGCCTTTCCATCCAACCAGTTTGGAAATCAGGAACCAGGCACAAATTCCCAAATCAAGGATTTCGCCAAGTCTTACAACGCTCATTTTGACATGTTCAGTAAGATCGATGTGAACGGCAACTCTGCAAACCCTCTGTGGAAGTGGCTGAAGGAACAACCGAATGGGAAAGGATTCCTTGGAAATGGCATCAAGTGGAATTTCACTAAGTTCCTTATTAACCGCATGAAGGCCAGGTTGTGAAGAGATACTCCCCATTACAGGATCCAAGCGTGGTGGAGAAGGACCTGCCTAACTATCTCTAAGGATCATCAGATTGCTGCCCCTCTTCATTCCCCCCGACCGCTGGGTAACAGTGCTGTCCTCTCACGGACCAATGACGGCTTGTTTGGAAACCCCTCTTGAGGAAAGAACAGGCCTGATGCATTTGGCGTGCAACCCCTCCTGAGAGCATCACCAGCGCCCAGCGTCAGTCTGGAGAGAGACCCCGCTCCTTTAACTAACCCCTCGGCTTCGAAATGGAAATATTTAGAACTAGTGttacatttcttaataaatgcGCAAAGATTAATTTGAACAGTTGTTGGTGGTTTGTTGATGTCAAGGAGCCAGCGTTATTTTGGTATTATTGAGG
>TU99607
AATACCTCACATGTAGACAGGCTTCAAGCTTGTAGTCAGCAAAACGATCAACCTATGAGGAATAAACAGCCTCGGAGTCCAGTTAATATTTGTTTGgaggcctatatatatatatatatacacgcgcAGGGTTTTGAGTTCTGGAGATTTGAGCACTTTAAGAGGATTTGATCTAATACGCTGCCTGCTGTTTCAGTAGTTAGTACTGGAAGGCAGTCATGCGTTTCTTAGGGTCTGCTGTGGTTTTGTCTCTAGTGTTGCAGACGATGtctgcACAGCTCGAGGACTGGCAGTTGGCCAAATCTATTTATGAATTTACGGTCACGGATATAGACGGCAACGACGTTTCCCTGGAAAAATACAGgGGGAACGTTGTCATCATCACTAACGTTGCCTCAAAGTGAGGCAAAACCCCGGTAAACTACTCTCAGTTTGCAGAAATGCACGCCAAATGTACGCTGAGAGAGGTTTAAGCATCCTGGCCTTTCCATCCAACCAGTTTGGAAATCAGGAACCAGGCACAAATTCCCAAATCAAGGATTTCGCCAAGTCTTACAACGCTCATTTTGACATGTTCAGTAAGATCGATGTGAACGGCAACTCTGCAAACCCTCTGTGGAAGTGGCTGAAGGAACAACCGAATGGGAAAGGATTCCTTGGAAATGGCATCAAGTGGAATTTCACTAAGTTCCTTATTAACCGCATGAAGGCCAGGTTGTGAAGAGATACTCCCCATTACAGGATCCAAGCGTGGTGGAGAAGGACCTGCCTAACTATCTCTAAGGATCATCAGATTGCTGCCCCTCTTCATTCCCCCCGACCGCTGGGTAACAGTGCTGTCCTCTCACGGACCAATGACGGCTTGTTTGGAAACCCCTCTTGAGGAAAGAACAGGCCTGATGCATTTGGCGTGCAACCCCTCCTGAGAGCATCACCAGCGCCCAGCGTCAGTCTGGAGAGAGACCCCGCTCCTTTAACTAACCCCTCGGCTTCGAAATGGAAATATTTAGAACTAGTGttacatttcttaataaatgcGCAAAGATTAATTTGAACAGTTGTTGGTGGTTTGTTGATGTCAAGGAGCCAGCGTTATTTTGGTATTATTGAGG
>TU99608
AATACCTCACATGTAGACAGGCTTCAAGCTTGTAGTCAGCAAAACGATCAACCTATGAGGAATAAACAGCCTCGGAGTCCAGTTAATATTTGTTTGgaggcctatatatatatatatatacacgcgcAGGGTTTTGAGTTCTGGAGATTTGAGCACTTTAAGAGGATTTGATCTAATACGCTGCCTGCTGTTTCAGTAGTTAGTACTGGAAGGCAGTCATGCGTTTCTTAGGGTCTGCTGTGGTTTTGTCTCTAGTGTTGCAGACGATGtctgcACAGCTCGAGGACTGGCAGTTGGCCAAATCTATTTATGAATTTACGGTCACGGATATAGACGGCAACGACGTTTCCCTGGAAAAATACAGgGGGAACGTTGTCATCATCACTAACGTTGCCTCAAAGTGAGGCAAAACCCCGGTAAACTACTCTCAGTTTGCAGAAATGCACGCCAAATGTACGCTGAGAGAGGTTTAAGCATCCTGGCCTTTCCATCCAACCAGTTTGGAAATCAGGAACCAGGCACAAATTCCCAAATCAAGGATTTCGCCAAGTCTTACAACGCTCATTTTGACATGTTCAGTAAGATCGATGTGAACGGCAACTCTGCAAACCCTCTGTGGAAGTGGCTGAAGGAACAACCGAATGGGAAAGGATTCCTTGGAAATGGCATCAAGTGGAATTTCACTAAGTTCCTTATTAACCGCATGAAGGCCAGGTTGTGAAGAGATACTCCCCATTACAGGATCCAAGCGTAAGCTGCATTAATCTTTCGATTGTATTTTAATCTGAGGCCATGTTTAAGATTACAGTACCTTATGTTTCTCTTTTAGGTGGTGGAGAAGGACCTGCCTAACTATCTCTAAGGATCATCAGATTGCTGCCCCTCTTCATTCCCCCCGACCGCTGGGTAACAGTGCTGTCCTCTCACGGACCAATGACGGCTTGTTTGGAAACCCCTCTTGAGGAAAGAACAGGCCTGATGCATTTGGCGTGCAACCCCTCCTGAGAGCATCACCAGCGCCCAGCGTCAGTCTGGAGAGAGACCCCGCTCCTTTAACTAACCCCTCGGCTTCGAAATGGAAATATTTAGAACTAGTGttacatttcttaataaatgcGCAAAGATTAATTTGAACAGTTGTTGGTGGTTTGTTGATGTCAAGGAGCCAGCGTTATTTTGGTATTATTGAGG

Function

symbol description
gpx4a Predicted to enable glutathione peroxidase activity and phospholipid-hydroperoxide glutathione peroxidase activity. Predicted to act upstream of or within response to oxidative stress. Predicted to be active in mitochondrion and nucleus. Is expressed in epidermal superficial stratum; gut; liver; otic vesicle; and yolk syncytial layer. Human ortholog(s) of this gene implicated in spondylometaphyseal dysplasia Sedaghatian type. Orthologous to human GPX4 (glutathione peroxidase 4).

NR:

description
glutathione peroxidase 4a isoform 2 precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99606 True 1213 TUCP 0.45 7 3189847 3194492
TU99607 False 1112 TUCP 0.46 7 3189847 3192940
TU99608 False 1191 TUCP 0.45 6 3189847 3192940

Neighbor

gene id symbol gene type direction distance location
lacc1 lacc1,LOC107551973,LOC107748901,LOC107561313,LOC107688676,LOC107713702 coding downstream 136610 3045802 ~ 3053237 (-)
gtf2f2b gtf2f2b,gtf2f2,LOC107661326,LOC107748886,LOC108267015,LOC103042992,LOC107691617 coding downstream 215937 2957444 ~ 2973910 (-)
chmp2ba chmp2ba,chmp2b,LOC107661322,LOC107551976,LOC107688654,LOC107561317,LOC107713700 coding downstream 270819 2909071 ~ 2919028 (-)
LOC122351191 NA coding downstream 332518 2855189 ~ 2857329 (-)
LOC122351447 NA coding downstream 339297 2843961 ~ 2850550 (-)
LOC122351399 enox1,LOC107549911,LOC107661308,LOC107561323,LOC107713727,LOC107688647 coding upstream 93442 3287934 ~ 3321690 (-)
tnfsf11 tnfsf11,LOC107549913,LOC107688674,LOC107713713,LOC107561312 coding upstream 210320 3404812 ~ 3411893 (-)
akap11 akap11,LOC107549933,LOC107713731 coding upstream 224569 3419061 ~ 3436944 (-)
rgcc rgcc,LOC107664012,LOC107549932,LOC107713737 coding upstream 407181 3601673 ~ 3606428 (-)
zgc:101559 zgc:101559,LOC107663997,LOC107749038,LOC107713736,LOC108435193,LOC108232329,LOC106527128 coding upstream 412994 3607486 ~ 3610384 (-)
G67288 tsc22d1,LOC107713726,LOC107551985 non-coding downstream 173334 3015213 ~ 3016513 (-)
G67274 LOC107748883,LOC107551985,LOC107713726,LOC107688648,LOC107576221 non-coding downstream 208528 2978329 ~ 2981319 (-)
G67251 NA non-coding downstream 258627 2930008 ~ 2931220 (-)
G67243 NA non-coding downstream 281888 2907651 ~ 2907959 (-)
G67237 NA non-coding downstream 314207 2862970 ~ 2875640 (-)
G67377 si:ch73-63e15.2,LOC107669818,LOC107592676,LOC107719621,LOC107655177 non-coding upstream 44171 3238663 ~ 3239585 (-)
LOC122351420 NA non-coding upstream 50877 3245369 ~ 3245897 (-)
G67383 NA non-coding upstream 190375 3384867 ~ 3385210 (-)
G67384 NA non-coding upstream 193439 3387931 ~ 3388185 (-)
G67475 vwa8 non-coding upstream 386350 3580842 ~ 3581209 (-)
serp2 NA other downstream 144540 3017043 ~ 3045307 (-)
LOC122352064 galnt13,galnt1,LOC107671291,LOC107566748,LOC106586166,LOC107657719,LOC107687813,LOC107723435,LOC107706221,LOC107593713 other downstream 350893 2807924 ~ 2838954 (-)
LOC122352168 galnt13,LOC107657405,LOC107566748,LOC107671291,LOC107559530,LOC107745272 other downstream 391253 2763420 ~ 2798594 (-)
G67204 NA other downstream 560341 2627323 ~ 2629506 (-)
si:dkey-11f4.7 si:dkey-11f4.7,LOC107731100,LOC107699957 other downstream 1335935 1736466 ~ 1853912 (-)
dgkh dgkh,LOC107713732,LOC107549907 other upstream 243264 3437756 ~ 3507292 (-)
G67668 NA other upstream 925971 4120463 ~ 4122103 (-)
wipf1a LOC107657348,LOC107600727 other upstream 947798 4142290 ~ 4150239 (-)
pde11a pde11a,LOC107657382,LOC107671328 other upstream 1421350 4615842 ~ 4666654 (-)
LOC122351499 LOC107670334,LOC107747232 other upstream 1597932 4792424 ~ 4822965 (-)

Expression


Co-expression Network