CI01000000_01898604_01899281


Basic Information

Item Value
gene id CI01000000_01898604_01899281
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1898042 ~ 1899281 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_01898604_01899281.mRNA
GAATAAAAAAACATGCTTTAAAATTGTGTTTTTAATAAGGGATACTAAATGGTGTCATTTCATTCCCAGTTCAGTTTGTTGTAGCTATTATTTAGCTGATAAAGAGCTAATTTGCATTCACAATAAACAATATTTAAAAAAAAAAAAAAAAAAAAAAGTACATATTTTTTGCAATAATTGCGAAATCAACTAGTATGTGGGTTGATAAAACTGGCAAATAATCAAGTGATAAACATGGGCAAATCTTTCAGAAATGATTCGATGGAAAGATCCGACTCAAAAGAATGATTCGTTCACGAATCACCGGTAGTTGCGACTCATTTTATCTTCACAGACATGAATGCGCGTTTAGTTTTCTTGTGTGTTCAGTTTTATTAACCTGTCAGTAGTGTTTAATCAATCGGTCCAAGGCTAACGACATAAATTGCACGAAAATAGGTTGAAAATGCTTTATATGAGACATTTTAGCTTGACGTTTTGTTTTTAAAAATATTAGTACTGTGAGTGTTAGTGGTTTGTTTTCTCTTATAAACAATCATTGGAAGACAATATCACAATTATAATGGCAAGTGTGCTTGTTGATTTGGATGTTGAGAGTCTTGCTCCAGAGGTCCATAAAGAAGACAAACTTGACTTTTCAGCAACAAGGAAACTGTACTCTTATGTAAAGAAAAGGACGTTTGCAGCATTTGTGGCTTCCAAGAAAGTTCCTCCAACCTGTGAAAACACCTCACCAGCTCTTTGGCAGTGTTGTGAACAGTCATTCAAAGAGCCATCATCAATCCACAAACATGTTGCCAACAGCCATGCCAGTGAGATTCACCAGCTGACCACTGAGACGCTGGACGAGATGCTTCAGCAGGCTCACAGCCAGGACTCTATGGAAGAGTCCATTAATGAAGAATCAACAGATGTATCATCCTGGATCCCTGATACAAGCCATGTTCCAGAGGATGACCTTATCAAGGGTCCAGGTGAAGTTCTGCTGTATTACTGCTACAGTCAAATAAATGATCCTCAGATCATTTGTCAGTGGCAGAAAGAGCTTTGTTCAAAACTTCAACTAACAGGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_01898604_01899281.mRNA True 1075 mRNA 0.37 3 1898042 1899281

Neighbor

gene id symbol gene type direction distance location
CI01000000_01879407_01879559 NA coding upstream 18062 1879407 ~ 1879980 (+)
CI01000000_01848610_01851296 NA coding upstream 46144 1847543 ~ 1851898 (+)
CI01000000_01680507_01690297 CPLX2, CPLX1, CPLX1.L coding upstream 206848 1680507 ~ 1691194 (+)
CI01000000_01511690_01517631 IKBKAP coding upstream 380323 1511690 ~ 1517719 (+)
CI01000000_01459294_01485147 SLC44A1 coding upstream 412731 1459294 ~ 1485311 (+)
CI01000000_01899373_01901550 TSTD2 coding downstream 92 1899373 ~ 1901682 (+)
CI01000000_01916310_01925119 NA coding downstream 16771 1916052 ~ 1925390 (+)
CI01000000_01978179_01992602 PPP2R2BB, PPP2R2B, PPP2R2B.L coding downstream 78898 1978179 ~ 1992961 (+)
CI01000000_01996254_01997531 GPR151 coding downstream 96793 1996074 ~ 1997617 (+)
CI01000000_02018856_02033091 EXOSC3 coding downstream 119316 2018597 ~ 2034379 (+)
G645 NA non-coding upstream 54874 1842322 ~ 1843168 (+)
G593 NA non-coding upstream 163653 1733247 ~ 1734389 (+)
G576 NA non-coding upstream 191057 1706770 ~ 1706985 (+)
G428 NA non-coding upstream 407695 1487224 ~ 1490347 (+)
G699 NA non-coding downstream 19451 1918732 ~ 1918942 (+)
G700 NA non-coding downstream 19975 1919256 ~ 1919564 (+)
G710 NA non-coding downstream 124480 2023761 ~ 2023971 (+)
G717 NA non-coding downstream 138752 2038033 ~ 2038258 (+)
G718 NA non-coding downstream 139196 2038477 ~ 2038716 (+)
G435 NA other upstream 465188 1425121 ~ 1432854 (+)
G350 NA other upstream 1221105 671842 ~ 676937 (+)
G252 NA other upstream 1390970 503209 ~ 507072 (+)
G2774 NA other downstream 2554497 4453778 ~ 4454232 (+)
G2850 NA other downstream 2826705 4725986 ~ 4726482 (+)
G6811 NA other downstream 8305550 10204831 ~ 10321679 (+)
G6820 NA other downstream 8527942 10427223 ~ 10433018 (+)
G7018 NA other downstream 9079208 10978489 ~ 10980872 (+)

Expression


Co-expression Network