G67448


Basic Information

Item Value
gene id G67448
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 3828823 ~ 3829772 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU99748
acacacacactcacattaaTCTAAAGAAGGGGAACAGGACGCAAAACAGTATTGCTCTTCAAAACATCATCTTcaacaaagtaaaatataaaaacactgatagGGTTGAAACGTAACCATGTCATAACTTACTGAATGctacgaaaaaaaaacaaaaaaaaaacaacggcaCTGTGTATTGTGGTTTGttgttaagaaataaataataagtcattataattgtttttatgtaaagaaaaatataatacaaaataacataaaatatcataCAAATGAGTTTTGTAAAGGTTGCACAGATATTTTGTTCATtcttttatacatacatacagacattTGTACAAAGCGATGGCCGGGTAAATACCTCTACAGTCACCACTGCTATCATCACAGGTCCGCTTCACGTATGTACATGCTAACAGCAGGAGAAAGCAACATTTACAGGCAGAATGGGGGGGAAATAATGGACTGTTCCTTCACAAGGTAGTGCAGTACGTGATCAGACTCTTTTTGGATTTCATGATCAGGCTGTCTTAAGAAAATATTCGGATAATGCTACTAAGCCCATATTCagtctcaaaataataaatgacgaAGAACCTTGTATTTTGAAAACTGCTGATACTTCAGAGCACGGCTGTCCTTTCTGAATAAACCCTCCACATGAAAGTGAAGATTTCATATTCTTCATCGCAAAGTGAGCCATACTACTCCTGAAgtatataatatactttatattagtgcagtcaaacgattaatcgcgattaatcaattccaaaataaaa
>TU99751
TTAGCATTCAttctttagaaaatattttgagaatgtttattataaaaatataaatgtttccactacaaatcattttacattagtAGACAAGGCCATctacacacacgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcacattaaTCTAAAGAAGGGGAACAGGACGCAAAACAGTATTGCTCTTCAAAACATCATCTTcaacaaagtaaaatataaaaacactgatagGGTTGAAACGTAACCATGTCATAACTTACTGAATGctacgaaaaaaaaacaaaaaaaaaacaacggcaCTGTGTATTGTGGTTTGttgttaagaaataaataataagtcattataattgtttttatgtaaagaaaaatataatacaaaataacataaaatatcataCAAATGAGTTTTGTAAAGGTTGCACAGATATTTTGTTCATtcttttatacatacatacagacattTGTACAAAGCGATGGCCGGGTAAATACCTCTACAGTCACCACTGCTATCATCACAGGTCCGCTTCACGTATGTACATGCTAACAGCAGGAGAAAGCAACATTTACAGGCAGAATGGGGGGGAAATAATGGACTGTTCCTTCACAAGGTAGTGCAGTACGTGATCAGACTCTTTTTGGATTTCATGATCAGGCTGTCTTAAGAAAATATTCGGATAATGCTACTAAGCCCATATTCagtctcaaaataataaatgacgaAGAACCTTGTATTTTGAAAACTGCTGATACTTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99748 False 782 lncRNA 0.34 1 3828991 3829772
TU99751 True 795 lncRNA 0.34 1 3828823 3829617

Neighbor

gene id symbol gene type direction distance location
stx19 stx19,LOC107664001,LOC107749033,LOC107728237 coding upstream 61286 3760833 ~ 3767537 (+)
rsph1 rsph1,LOC107749034,LOC107728239,LOC107670901,LOC107663994 coding upstream 69608 3754816 ~ 3759215 (+)
fbxl3a fbxl3,fbxl3a,LOC107549764,LOC107664003,LOC107670904 coding upstream 76200 3744006 ~ 3752623 (+)
mycbp2 mycbp2,LOC107549765,LOC107664005 coding upstream 86084 3670562 ~ 3742739 (+)
vwa8 vwa8 coding upstream 244132 3507925 ~ 3584691 (+)
LOC122351330 LOC107571834,LOC107657380,LOC107716910 coding downstream 76969 3906741 ~ 3910820 (+)
LOC122351193 rapgef4,LOC107742951,LOC107671325 coding downstream 96119 3925891 ~ 3945608 (+)
zak zak,LOC107742952,LOC107671274,LOC107718456,LOC107657350,LOC107600726,LOC107588248,LOC105908008,LOC107602297 coding downstream 118246 3948018 ~ 3981211 (+)
sp9 sp9,LOC107657367,LOC107742954,LOC107600696,LOC107588267,LOC107739462 coding downstream 279878 4109650 ~ 4112225 (+)
hoxd13a NA coding downstream 551752 4381524 ~ 4382885 (+)
LOC122351161 NA non-coding upstream 182209 3642961 ~ 3646614 (+)
G67418 NA non-coding upstream 190741 3601318 ~ 3638082 (+)
LOC122351601 LOC107749038,LOC107663997 non-coding upstream 209517 3606570 ~ 3619306 (+)
LOC122351351 NA non-coding upstream 236583 3586803 ~ 3592240 (+)
G67396 NA non-coding upstream 387079 3437097 ~ 3441744 (+)
G67562 LOC107588232,LOC107742953,LOC107671312,LOC107657349 non-coding downstream 116762 3946534 ~ 4031820 (+)
G67604 NA non-coding downstream 208824 4038596 ~ 4038822 (+)
G67606 NA non-coding downstream 234865 4064637 ~ 4064961 (+)
G67637 NA non-coding downstream 326884 4156656 ~ 4157963 (+)
G67641 NA non-coding downstream 332584 4162356 ~ 4165072 (+)
LOC122351398 dnajc15,LOC107549910 other upstream 548771 3262607 ~ 3280052 (+)
LOC122351419 polr2e,polr2eb,LOC107592678,LOC107669821,LOC107599482 other upstream 632205 3194773 ~ 3196618 (+)
bpifcl bpi other upstream 2092503 1713812 ~ 1736320 (+)
G66795 NA other upstream 2693834 1127526 ~ 1134989 (+)
LOC122351650 si:ch1073-55a19.2,LOC107670647,LOC107709149,LOC107686982,LOC107559216,LOC108440489,LOC107686979,LOC107709150 other upstream 2929444 858680 ~ 899379 (+)
LOC122352174 rbm45,LOC107716918,LOC107752596 other downstream 83866 3913638 ~ 3922878 (+)
G67566 LOC107742952,LOC107718452,LOC107671286,LOC107715667 other downstream 118264 3948036 ~ 3983582 (+)
cdca7a LOC107718452,LOC107671286,LOC107588247,LOC107742973,LOC107657370,LOC107600694 other downstream 151574 3981346 ~ 3985962 (+)
scrn3 scrn3,LOC107739455,LOC107671317,LOC107588231,LOC107657366,LOC107600698 other downstream 290755 4120527 ~ 4127013 (+)
G67630 NA other downstream 311282 4141054 ~ 4222171 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000080_04488197_04502798 NA coding CI01000080 null 4487831 ~ 4504534 (-)