CI01000000_01899373_01901550 (TSTD2)


Basic Information

Item Value
gene id CI01000000_01899373_01901550
gene name TSTD2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1899373 ~ 1901682 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_01899373_01901550.mRNA
GTACGAGTGGCTACTGAGGGTATCAATGGTACAGTTGGTGGTACCAAAACTGCCACTAATCTTTATGTCAAGGCAATGCTGTCACATCCAACCTTCAAAATAATGCAAGTACAGGATTTCAAGAAAAGTGAAGGAGGTGCAGAGTGTTTTTCTGATCTGAAGGTTGGTGTTTACAAAGAAATTGTTCCTATGGGTGTAGATCCGGACATCATCTCCTACAGATTGGCTGGAATACACTTGGAACCAGAGGAATTTCACAAAGAAGTGAAGGCGTTTGTGGAGAATCAATCCTCAAATAGTGATACAATACTGCTGGACTGCAGAAACTTCTATGAGAGCAAAATTGGTCAGTTTGATCAGTGTTTGGCCCCCGACATCCGGAAATTCAGTTACTTCCCAGACTACGTGGATAAGAATTTGGATCTCTTTCGGGACAAAAAGGTTCTGATGTACTGTACAGGGGGCATCCGCTGTGAACGGGGCTCAGCTTATCTCAGATCAAAAAATGTATGCAAGGAGGTGTACCAGCTGAAGGGAGGTATTCACAAATACCTAGAGCAGTTCCCCGATGGCTTCTATCGCGGTAAACTCTTTGTGTTTGATGAACGTTATGCCATTGCATTCAATCAGGACATCATCTCAGAGTGCAGATATTGCAATTGCCCATGGGATCAATATCAGCTGTGCTCCACAGACTTCTGCTGCCAGCTGGTGCTGTCGTGCACCACCTGCAGAAAGAGCGGGCTGACAGCCTGCTGTCCTGTGTGCCAAGCCAAAGAGCAAAACCACAGTGACGTCTCCTCTGATGGGCTTCCTCATCGAGAGGAGTGCGAATGCACAATGTCGCGACCCAGAATCCCCAAAGATACACTATGACAAACTCATTGAGTTGAAAATCATCTCAGATGGCCTGTAACCTTGTGATTTTTGATCATGCTTTTTTAATAACTTGAAACTGTTGTACCAATTTGGTCATGCTTTTAAAACTGGACTCAATGCAAATCTTCA

Function

symbol description
tstd2 Orthologous to human TSTD2 (thiosulfate sulfurtransferase like domain containing 2).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_01899373_01901550.mRNA True 1008 mRNA 0.45 6 1899373 1901682

Neighbor

gene id symbol gene type direction distance location
CI01000000_01898604_01899281 NA coding upstream 92 1898042 ~ 1899281 (+)
CI01000000_01879407_01879559 NA coding upstream 19393 1879407 ~ 1879980 (+)
CI01000000_01848610_01851296 NA coding upstream 47475 1847543 ~ 1851898 (+)
CI01000000_01680507_01690297 CPLX2, CPLX1, CPLX1.L coding upstream 208179 1680507 ~ 1691194 (+)
CI01000000_01511690_01517631 IKBKAP coding upstream 381654 1511690 ~ 1517719 (+)
CI01000000_01916310_01925119 NA coding downstream 14370 1916052 ~ 1925390 (+)
CI01000000_01978179_01992602 PPP2R2BB, PPP2R2B, PPP2R2B.L coding downstream 76497 1978179 ~ 1992961 (+)
CI01000000_01996254_01997531 GPR151 coding downstream 94392 1996074 ~ 1997617 (+)
CI01000000_02018856_02033091 EXOSC3 coding downstream 116915 2018597 ~ 2034379 (+)
CI01000000_02080057_02086228 REST coding downstream 178149 2079831 ~ 2087510 (+)
G645 NA non-coding upstream 56205 1842322 ~ 1843168 (+)
G593 NA non-coding upstream 164984 1733247 ~ 1734389 (+)
G576 NA non-coding upstream 192388 1706770 ~ 1706985 (+)
G428 NA non-coding upstream 409026 1487224 ~ 1490347 (+)
CI01000000_01459294_01485147 SLC44A1 non-coding upstream 430571 1459294 ~ 1485311 (+)
G699 NA non-coding downstream 17050 1918732 ~ 1918942 (+)
G700 NA non-coding downstream 17574 1919256 ~ 1919564 (+)
G710 NA non-coding downstream 122079 2023761 ~ 2023971 (+)
G717 NA non-coding downstream 136351 2038033 ~ 2038258 (+)
G718 NA non-coding downstream 136795 2038477 ~ 2038716 (+)
G435 NA other upstream 466519 1425121 ~ 1432854 (+)
G350 NA other upstream 1222436 671842 ~ 676937 (+)
G252 NA other upstream 1392301 503209 ~ 507072 (+)
G2774 NA other downstream 2552096 4453778 ~ 4454232 (+)
G2850 NA other downstream 2824304 4725986 ~ 4726482 (+)
G6811 NA other downstream 8303149 10204831 ~ 10321679 (+)
G6820 NA other downstream 8525541 10427223 ~ 10433018 (+)
G7018 NA other downstream 9076807 10978489 ~ 10980872 (+)

Expression


Co-expression Network