scel (scel,LOC107749035,LOC107670903,LOC107663996,LOC107713739)


Basic Information

Item Value
gene id scel
gene name scel,LOC107749035,LOC107670903,LOC107663996,LOC107713739
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 3627501 ~ 3637588 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248044.1
TGGTGTGTGTCATACGAAGCCACACCTTTCGCTGGTCTTGCCTTCCCTACCCAGGTCAAATATGTAAGAGGGGAAGAGCAGCAAACTGTACGTTATTCTCACTAAACCTCTGTCACATCCCTCGCACCTGAAATACCCAGCGTAAACCATGTCTTTCACTCCAAATCCATACAGCAAAACCCAAACAGtcaCAACTTCAAGCACTAGATCCACTAAATCCCTGCTGAAGGACAATAGCTGGATTAAGACAAACGTGAACCAGGATGAACAAGTCGAACGGGATTCGAATTTCGGCAAAAGCGTCCTGAGTCGCTACAAGTCCAACGAAAACCTCGTCAGCCCTCAGGACAAAACTAGCAAAACCGAGAGCAAAACCGGCACCGTCTCCACTTCGTCGGGCACCTCTGTCCAAGCTCTCTCTAAAAGATTCGGTGGCAGCCAGGACAAACTGAACGAAACCAGAACCACAGGAACTAAAACAACCGTGAAAACGGAGCCGAGGAGAAGCTCTACTTCTACAACAACGACGACGACGGTTAAAGAGGGCCAGAAGATAACCGAGACAACTGTGACCACTACCAaGCAGGATGTGGTGAAGACGTCTACTAAGTCTGAAACGCTCGCTGATAAAGACGCCAAGAGCTCCAGTGGTTTCAAAACTGAGGTCATTACTGTCAAGTCATCAAAGGACACTGTCGATGGACCGGCCTCACCGGTCAAGACCACCACAAGCATCAAAACCTACACCAAAGAGGAACCTGCACCAACTAAAACAACGTCGTACTCCGTCCGGTCCACAAAGAGGACTGAGGATCAACTGTTTGATACCCTCATACCAACACCCATCAAATCAGTAAGCACTAAACCTGACAGCAGTGACTCCAAGACTGAGGTGGTTACCGTGAAGACGTCGAAGGACATCAGCGACGTACCAACTTCACCTGTCAAGACCACTACCAGCATCAAGACCTACACCAAGGAGGATGTTTCCCCAATTAAAACAACGTCCTACAGCACAAAGAGTGACTCCAAGACTGAGGTGGTTACCGTGAAGACGCTGAAGGACATCAGCGACGTACCAAGTTCACCTGTCAAGACCACTACGAGCATCAAGACCTACACCAAGGAGGATGCTTCGCCGATTAAAACAACGTCCTACAGCACAAAGAGTGACTCCAAGACTGAGGTGGTTACCGTGAAGACGTCGAAGGACATCAGCGACGTACCAACTTCGCCTGTCAAGACCACCACAAGCATCAAAACCTACACCAAGGAAGATGTTTCGCCAGCTAAAACAACATCATCTTATTCTGTCCGATCCACAAAGAGCACCGAGGATCAACTCTTCGATACCCTCATACCTTCATCAATCAAGTCAGCCAACGCAAAAGCCGACAGCAGTCGCGAGGATGTGTCCGTCTCCAAATCCATCAGAACCGTGTATTCATCAAACGAGAGAGATGAGTGGAGTACGGTCTCGAGTCCTTCTTACACCAGGACGTCATACACAGAGAGCAGACCTGTTGATTACCTGTCGGACACGCTCACATCAAAAACCACCACCACTGTGTACGCTCCGCCGGAAAGGGTAGTAAGTGGGAAGGACATCTGCACAGTCTGCCGTAAAAACATGTACACGGATGAAAAGATTGTCCTGGACGATATGAACATCAACTGTCACGCAAGTTGCTTCAAGTGCGGGGTGTGTAACGTGTCTCTGGGGCACCTGAAGGCAGGGGACAGTTTGTGGGTGTACCGTCGGGCCATTCACTGTGAAAGCTGCTTCGGTGTCACTAAGGGCAAATGGCTGCACTGAAACAACGTTTAGCAGTAACAGAGTGATGTTATGAGAGATGGCAAATATACTTGCCTCCTCCAAAACTTTCCCATGGCTTTGATTTGGACTCCTATCAAACAGTTTATGGTGGTGGACTTTCGTCTGATAATAGACTTTGGGGTTTATTAATTGCATTGATTGCTATTCTCCCCAGTAATGCGACAAGGCTCTTATCTGATTACCGAAATAATAAGaatactatttaaaaagaatatttttccTAATacataatattgaatatttttggagatgctttatatttttcttcaattttgttgtattattgAAGCTTATATGGTGAGAAATGTCATAATAAAGTTTTCAtctgattgtt
>XM_043248045.1
TGGTGTGTGTCATACGAAGCCACACCTTTCGCTGGTCTTGCCTTCCCTACCCAGGTCAAATATGTAAGAGGGGAAGAGCAGCAAACTGTACGTTATTCTCACTAAACCTCTGTCACATCCCTCGCACCTGAAATACCCAGCGTAAACCATGTCTTTCACTCCAAATCCATACAGCAAAACCCAAACAGtcaCAACTTCAAGCACTAGATCCACTAAATCCCTGCTGAAGGACAATAGCTGGATTAAGACAAACGTGAACCAGGATGAACAAGTCGAACGGGATTCGAATTTCGGCAAAAGCGTCCTGAGTCGCTACAAGTCCAACGAAAACCTCGTCAGCCCTCAGGACAAAACTAGCAAAACCGAGAGCAAAACCGGCACCGTCTCCACTTCGTCGGGCACCTCTGTCCAAGCTCTCTCTAAAAGATTCGGTGGCAGCCAGGACAAACTGAACGAAACCAGAACCACAGGAACTAAAACAACCGTGAAAACGGAGCCGAGGAGAAGCTCTACTTCTACAACAACGACGACGACGGTTAAAGAGGGCCAGAAGATAACCGAGACAACTGTGACCACTACCAaGCAGGATGTGGTGAAGACGTCTACTAAGTCTGAAACGCTCGCTGATAAAGACGCCAAGAGCTCCAGTGGTTTCAAAACTGAGGTCATTACTGTCAAGTCATCAAAGGACACTGTCGATGGACCGGCCTCACCGGTCAAGACCACCACAAGCATCAAAACCTACACCAAAGAGGAACCTGCACCAACTAAAACAACGTCGTACTCCGTCCGGTCCACAAAGAGGACTGAGGATCAACTGTTTGATACCCTCATACCAACACCCATCAAATCAGTAAGCACTAAACCTGACAGCAGTGACTCCAAGACTGAGGTGGTTACCGTGAAGACGTCGAAGGACATCAGCGACGTACCAACTTCACCTGTCAAGACCACTACCAGCATCAAGACCTACACCAAGGAGGATGTTTCCCCAATTAAAACAACGTCCTACAGCACAAAGAGTGACTCCAAGACTGAGGTGGTTACCGTGAAGACGTCGAAGGACATCAGCGACGTACCAACTTCGCCTGTCAAGACCACCACAAGCATCAAAACCTACACCAAGGAAGATGTTTCGCCAGCTAAAACAACATCATCTTATTCTGTCCGATCCACAAAGAGCACCGAGGATCAACTCTTCGATACCCTCATACCTTCATCAATCAAGTCAGCCAACGCAAAAGCCGACAGCAGTCGCGAGGATGTGTCCGTCTCCAAATCCATCAGAACCGTGTATTCATCAAACGAGAGAGATGAGTGGAGTACGGTCTCGAGTCCTTCTTACACCAGGACGTCATACACAGAGAGCAGACCTGTTGATTACCTGTCGGACACGCTCACATCAAAAACCACCACCACTGTGTACGCTCCGCCGGAAAGGGTAGTAAGTGGGAAGGACATCTGCACAGTCTGCCGTAAAAACATGTACACGGATGAAAAGATTGTCCTGGACGATATGAACATCAACTGTCACGCAAGTTGCTTCAAGTGCGGGGTGTGTAACGTGTCTCTGGGGCACCTGAAGGCAGGGGACAGTTTGTGGGTGTACCGTCGGGCCATTCACTGTGAAAGCTGCTTCGGTGTCACTAAGGGCAAATGGCTGCACTGAAACAACGTTTAGCAGTAACAGAGTGATGTTATGAGAGATGGCAAATATACTTGCCTCCTCCAAAACTTTCCCATGGCTTTGATTTGGACTCCTATCAAACAGTTTATGGTGGTGGACTTTCGTCTGATAATAGACTTTGGGGTTTATTAATTGCATTGATTGCTATTCTCCCCAGTAATGCGACAAGGCTCTTATCTGATTACCGAAATAATAAGaatactatttaaaaagaatatttttccTAATacataatattgaatatttttggagatgctttatatttttcttcaattttgttgtattattgAAGCTTATATGGTGAGAAATGTCATAATAAAGTTTTCAtctgattgtt
>XM_043248046.1
CTGGTGTGTGTCATACGAAGCCACACCTTTCGCTGGTCTTGCCTTCCCTACCCAGGTCAAATATGTAAGAGGGGAAGAGCAGCAAACTGTACGTTATTCTCACTAAACCTCTGTCACATCCCTCGCACCTGAAATACCCAGCGTAAACCATGTCTTTCACTCCAAATCCATACAGCAAAACCCAAACAGtcaCAACTTCAAGCACTAGATCCACTAAATCCCTGCTGAAGGACAATAGCTGGATTAAGACAAACGTGAACCAGGATGAACAAGTCGAACGGGATTCGAATTTCGGCAAAAGCGTCCTGAGTCGCTACAAGTCCAACGAAAACCTCGTCAGCCCTCAGGACAAAACTAGCAAAACCGAGAGCAAAACCGGCACCGTCTCCACTTCGTCGGGCACCTCTGTCCAAGCTCTCTCTAAAAGATTCGGTGGCAGCCAGGACAAACTGAACGAAACCAGAACCACAGGAACTAAAACAACCGTGAAAACGGAGCCGAGGAGAAGCTCTACTTCTACAACAACGACGACGACGGTTAAAGAGGGCCAGAAGATAACCGAGACAACTGTGACCACTACCAaGCAGGATGTGGTGAAGACGTCTACTAAGTCTGAAACGCTCGCTGATAAAGACGCCAAGAGCTCCAGTGGTTTCAAAACTGAGGTCATTACTGTCAAGTCATCAAAGGACACTGTCGATGGACCGGCCTCACCGGTCAAGACCACCACAAGCATCAAAACCTACACCAAAGAGGAACCTGCACCAACTAAAACAACGTCGTACTCCGTCCGGTCCACAAAGAGGACTGAGGATCAACTGTTTGATACCCTCATACCAACACCCATCAAATCAGTAAGCACTAAACCTGACAGCAGTGACTCCAAGACTGAGGTGGTTACCGTGAAGACGTCGAAGGACATCAGCGACGTACCAAGTTCACCTGTCAAGACCACTACGAGCATCAAGACCTACACCAAGGAGGATGCTTCGCCGATTAAAACAACGTCCTACAGCACAAAGAGTGACTCCAAGACTGAGGTGGTTACCGTGAAGACGTCGAAGGACATCAGCGACGTACCAACTTCGCCTGTCAAGACCACCACAAGCATCAAAACCTACACCAAGGAAGATGTTTCGCCAGCTAAAACAACATCATCTTATTCTGTCCGATCCACAAAGAGCACCGAGGATCAACTCTTCGATACCCTCATACCTTCATCAATCAAGTCAGCCAACGCAAAAGCCGACAGCAGTCGCGAGGATGTGTCCGTCTCCAAATCCATCAGAACCGTGTATTCATCAAACGAGAGAGATGAGTGGAGTACGGTCTCGAGTCCTTCTTACACCAGGACGTCATACACAGAGAGCAGACCTGTTGATTACCTGTCGGACACGCTCACATCAAAAACCACCACCACTGTGTACGCTCCGCCGGAAAGGGTAGTAAGTGGGAAGGACATCTGCACAGTCTGCCGTAAAAACATGTACACGGATGAAAAGATTGTCCTGGACGATATGAACATCAACTGTCACGCAAGTTGCTTCAAGTGCGGGGTGTGTAACGTGTCTCTGGGGCACCTGAAGGCAGGGGACAGTTTGTGGGTGTACCGTCGGGCCATTCACTGTGAAAGCTGCTTCGGTGTCACTAAGGGCAAATGGCTGCACTGAAACAACGTTTAGCAGTAACAGAGTGATGTTATGAGAGATGGCAAATATACTTGCCTCCTCCAAAACTTTCCCATGGCTTTGATTTGGACTCCTATCAAACAGTTTATGGTGGTGGACTTTCGTCTGATAATAGACTTTGGGGTTTATTAATTGCATTGATTGCTATTCTCCCCAGTAATGCGACAAGGCTCTTATCTGATTACCGAAATAATAAGaatactatttaaaaagaatatttttccTAATacataatattgaatatttttggagatgctttatatttttcttcaattttgttgtattattgAAGCTTATATGGTGAGAAATGTCATAATAAAGTTTTCAtctgattgtt
>XM_043248047.1
TGGTGTGTGTCATACGAAGCCACACCTTTCGCTGGTCTTGCCTTCCCTACCCAGGTCAAATATGTAAGAGGGGAAGAGCAGCAAACTGTACGTTATTCTCACTAAACCTCTGTCACATCCCTCGCACCTGAAATACCCAGCGTAAACCATGTCTTTCACTCCAAATCCATACAGCAAAACCCAAACAGtcaCAACTTCAAGCACTAGATCCACTAAATCCCTGCTGAAGGACAATAGCTGGATTAAGACAAACGTGAACCAGGATGAACAAGTCGAACGGGATTCGAATTTCGGCAAAAGCGTCCTGAGTCGCTACAAGTCCAACGAAAACCTCGTCAGCCCTCAGGACAAAACTAGCAAAACCGAGAGCAAAACCGGCACCGTCTCCACTTCGTCGGGCACCTCTGTCCAAGCTCTCTCTAAAAGATTCGGTGGCAGCCAGGACAAACTGAACGAAACCAGAACCACAGGAACTAAAACAACCGTGAAAACGGAGCCGAGGAGAAGCTCTACTTCTACAACAACGACGACGACGGTTAAAGAGGGCCAGAAGATAACCGAGACAACTGTGACCACTACCAaGCAGGATGTGGTGAAGACGTCTACTAAGTCTGAAACGCTCGCTGATAAAGACGCCAAGAGCTCCAGTGGTTTCAAAACTGAGGTCATTACTGTCAAGTCATCAAAGGACACTGTCGATGGACCGGCCTCACCGGTCAAGACCACCACAAGCATCAAAACCTACACCAAAGAGGAACCTGCACCAACTAAAACAACGTCGTACTCCGTCCGGTCCACAAAGAGGACTGAGGATCAACTGTTTGATACCCTCATACCAACACCCATCAAATCAGTAAGCACTAAACCTGACAGCAGTGACTCCAAGACTGAGGTGGTTACCGTGAAGACGTCGAAGGACATCAGCGACGTACCAACTTCGCCTGTCAAGACCACCACAAGCATCAAAACCTACACCAAGGAAGATGTTTCGCCAGCTAAAACAACATCATCTTATTCTGTCCGATCCACAAAGAGCACCGAGGATCAACTCTTCGATACCCTCATACCTTCATCAATCAAGTCAGCCAACGCAAAAGCCGACAGCAGTCGCGAGGATGTGTCCGTCTCCAAATCCATCAGAACCGTGTATTCATCAAACGAGAGAGATGAGTGGAGTACGGTCTCGAGTCCTTCTTACACCAGGACGTCATACACAGAGAGCAGACCTGTTGATTACCTGTCGGACACGCTCACATCAAAAACCACCACCACTGTGTACGCTCCGCCGGAAAGGGTAGTAAGTGGGAAGGACATCTGCACAGTCTGCCGTAAAAACATGTACACGGATGAAAAGATTGTCCTGGACGATATGAACATCAACTGTCACGCAAGTTGCTTCAAGTGCGGGGTGTGTAACGTGTCTCTGGGGCACCTGAAGGCAGGGGACAGTTTGTGGGTGTACCGTCGGGCCATTCACTGTGAAAGCTGCTTCGGTGTCACTAAGGGCAAATGGCTGCACTGAAACAACGTTTAGCAGTAACAGAGTGATGTTATGAGAGATGGCAAATATACTTGCCTCCTCCAAAACTTTCCCATGGCTTTGATTTGGACTCCTATCAAACAGTTTATGGTGGTGGACTTTCGTCTGATAATAGACTTTGGGGTTTATTAATTGCATTGATTGCTATTCTCCCCAGTAATGCGACAAGGCTCTTATCTGATTACCGAAATAATAAGaatactatttaaaaagaatatttttccTAATacataatattgaatatttttggagatgctttatatttttcttcaattttgttgtattattgAAGCTTATATGGTGAGAAATGTCATAATAAAGTTTTCAtctgattgtt

Function

symbol description
scel Predicted to enable metal ion binding activity. Predicted to be involved in epidermis development. Predicted to be active in cytoplasm. Is expressed in corneal epithelium. Orthologous to human SCEL (sciellin).

NR:

description
sciellin isoform X1

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K24424 SCEL; sciellin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248044.1 True 2171 mRNA 0.47 29 3627501 3637587
XM_043248045.1 False 2024 mRNA 0.46 26 3627501 3637587
XM_043248046.1 False 2025 mRNA 0.46 26 3627501 3637588
XM_043248047.1 False 1877 mRNA 0.46 23 3627501 3637587

Neighbor

gene id symbol gene type direction distance location
slain1a LOC107663999,LOC107549929,LOC107670892,LOC107549760,LOC107713716,LOC107749036 coding downstream 1687 3616257 ~ 3625814 (-)
wu:fc50b12 LOC107549762,LOC108232414 coding downstream 11302 3614518 ~ 3616199 (-)
kbtbd7 kbtbd7,LOC107549928,LOC107713735,LOC107664000,LOC107549759,LOC107670891 coding downstream 13457 3610456 ~ 3614044 (-)
zgc:101559 zgc:101559,LOC107663997,LOC107749038,LOC107713736,LOC108435193,LOC108232329,LOC106527128 coding downstream 17117 3607486 ~ 3610384 (-)
rgcc rgcc,LOC107664012,LOC107549932,LOC107713737 coding downstream 21073 3601673 ~ 3606428 (-)
cln5 LOC107749021,LOC107664004,LOC107549926,LOC107670900,LOC107728242,LOC107549738 coding upstream 113134 3750722 ~ 3754664 (-)
sp3a LOC107742953,LOC107718453,LOC107671312 coding upstream 391874 4029462 ~ 4038457 (-)
cir1 cir1,LOC102235890 coding upstream 436447 4074035 ~ 4120043 (-)
gpr155a gpr155,LOC107657393,LOC107600701,LOC107671327 coding upstream 489778 4127366 ~ 4140120 (-)
chn1 chn1,LOC107742958,LOC107739458,LOC105007244 coding upstream 521272 4158860 ~ 4196267 (-)
G67475 vwa8 non-coding downstream 46292 3580842 ~ 3581209 (-)
G67384 NA non-coding downstream 239316 3387931 ~ 3388185 (-)
G67383 NA non-coding downstream 242291 3384867 ~ 3385210 (-)
LOC122351420 NA non-coding downstream 381604 3245369 ~ 3245897 (-)
G67377 si:ch73-63e15.2,LOC107669818,LOC107592676,LOC107719621,LOC107655177 non-coding downstream 387916 3238663 ~ 3239585 (-)
G67490 mycbp2,LOC107749028 non-coding upstream 4859 3642447 ~ 3671076 (-)
G67491 NA non-coding upstream 34939 3672527 ~ 3742733 (-)
G67537 NA non-coding upstream 191430 3829018 ~ 3829643 (-)
G67581 NA non-coding upstream 307731 3945319 ~ 3946905 (-)
G67597 zak,LOC107657350,LOC107718456,LOC107600726,LOC107671274,LOC107742952,LOC107588248 non-coding upstream 341687 3979275 ~ 3981190 (-)
dgkh dgkh,LOC107713732,LOC107549907 other downstream 120209 3437756 ~ 3507292 (-)
G67358 gpx4a other downstream 433009 3189847 ~ 3194492 (-)
serp2 NA other downstream 582194 3017043 ~ 3045307 (-)
LOC122352064 galnt13,galnt1,LOC107671291,LOC107566748,LOC106586166,LOC107657719,LOC107687813,LOC107723435,LOC107706221,LOC107593713 other downstream 788547 2807924 ~ 2838954 (-)
LOC122352168 galnt13,LOC107657405,LOC107566748,LOC107671291,LOC107559530,LOC107745272 other downstream 828907 2763420 ~ 2798594 (-)
G67668 NA other upstream 482875 4120463 ~ 4122103 (-)
wipf1a LOC107657348,LOC107600727 other upstream 504702 4142290 ~ 4150239 (-)
pde11a pde11a,LOC107657382,LOC107671328 other upstream 978254 4615842 ~ 4666654 (-)
LOC122351499 LOC107670334,LOC107747232 other upstream 1154836 4792424 ~ 4822965 (-)
LOC122351456 LOC107747234,LOC107560802,LOC107670305,LOC107752600,LOC107689492,LOC107549748,LOC101883674 other upstream 1219062 4856650 ~ 4973955 (-)

Expression


Co-expression Network