hnmt (hnmt,LOC107751616,LOC107720324,LOC107663827,LOC107658225,LOC107577691,LOC107558040)


Basic Information

Item Value
gene id hnmt
gene name hnmt,LOC107751616,LOC107720324,LOC107663827,LOC107658225,LOC107577691,LOC107558040
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 9570400 ~ 9574754 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248061.1
TGCGTCTTTAAGAGTGGGGGCGTGGCTCATCTTTGTGTGGATGTGCGGCGGCGCAGCGTCTCGCTGCTCGTGTGAAAACGAAAAGAAGTGAAGGTGAAAACCATGGCAGCTCCATTCAGATCACTGGTGGAAGATTATCCAAGATACCTCCGATCCTTTGAGCTTTTTCTGGAGCGCTCATCAGAGCACCAGTGCATGCAGGACTTCATTCATAATATGCTACCAGACATACTGGCAAGTATTGGAGGCGGGAGATCCGTTTTCAATGTAATGGGAGTAGGGAGTGGAGCAGGTGAGATTGATCTAGAGATGCTAGCTCAACTACACCTGAAACATCCACGTGCCAGAGTCGACAATGAAGTGGTGGAACCAAGCAATGAAATGATGCACAAATATAAAGTTCGAGTGTCAACAACTCCAAATCTTGATCATATAAACTTTACTTGGAATAAGATGACGGCATCTGAATTCGAAAAACACTGGCAGGAAAACAACCCTGGGAAAAAAATGGACTTCATTCACATGATACAGATGCTGTACTACGTCAAAGATCCAGAGGCCACTGTCTCTTTTTTTCGGAGTCTTTTACACAAAGATGGGAAACTCTTAATCATTCTGGTGTCAGGTGAGAGTGGATGGGGAAAATTATGGACAACCTTTAAAGAACAACTCTGTAGTCCTGAGCTCACTCAGTGTGTTACTACAGGAGATATAAAGACCTTCTTACATACTGAGAGCATCCCCTACCGGAACTATGAGCTTCTGTCCCAGATGGACATCACAGAGTGCTTTACTGAGGGGGACCAGGTGGGAGAACTGCTGCTGGATTTCCTTACAGAGGTCATAGAGTTCAGTAAGAACGCTCCTGAAGACCTGAAGAAAGGAGTTCTGGACTTGCTGAGACATCCTGACTGCAGCAAAGAGGTGGATGGAAGGATCATATTCAACAACAACCTGGGAGTCTTGGTGGTTGAGCCGTAGCTCCAAGACTTGGTTGTATCTCACCTGCAAACGAATATATAATGGTCCTCAACCTTTCCAAAGCTCCTCATTGTCTACACTGTCATTAAAAGGCcccttgatttttaaaaaatgctcttAATTTACTCCTAATTATTAAGAATAATgaatcttaaaaaatgtaaatcttttaaaataatttatacatggagtaagatttttattcatttaatatgacatttctatatttatatgaCAAGTCTAGAAATCACACTTTAAAATTAGCCTACCTCACATATTACTTTAAACCCTCTAAAAagatatatttctaaaaaaaaaaattaactgaggTGTTGAGGTAGTAAATTAAactaagaaatatataattttttagttattttgtcttattttaaatcGTGTTTTGCCCTCCTGGTTGAGAATAAATGGTTAAGGAAATACAGAACATCAGTATTTTAACATAGTAAGAATCATAacaataacatatattttaataaatcttttcGAGAGCCTTCGAGAAACTATGGTTTTCTTTTTCGAGGTAATTATTGTTCCGaagaatttaatattataacatgACGTTGTTATCTGTGAACAAACGGGAAAAGGAAGACCATGGAGAACAATGCTGAGTTTATATTGCATCACGATCAAACAAAACCAGTTAACTAAAGGCCTGTGTAGGTGACGGGTCGTGAAGAGACCTTGTAGCACAAACTCCAGTATGAACAACTCTGTACATACTTTGTAAAAATAGTCTAAGCAGCAAAGTACAACTTGAGATTATATTGTTTGGTGACTGGTTGTGTTGTTATGACCCTACACCTTATTTAGTTTAGGACAGATGTTTAACTAGACAGGACAAAGGTTGGATAGATACATTTGAAGGTTAATAATACACGTAcctgatttgattacagagtgTAGAGGGCTTGTTAATAGCCTGCCTCCCCCTGATAGCACATGTACATCACAGAGACGTCTGTTTGACTTTTGCATCTGCAAGACTTATTTTTTGGGTGTATGCTCATCTGAAATATGTCTATAGGATGCTTCTATCAGATGTCAAATAGACATTTATTAGAATGTATGTAAACTCACGTCTTAAAAACATCTGTAACATGTCTGTATAAAttagatgctttccagatcaatAATCTTGAACATAGGCTGCATACATGTGCTATCTGGGTCCATTTGTGTTTGCTTACGGTAGCATTAAAGACTTGAATATTGTCTTGTGTCTATTAACATTTCTGTATATCTGTCCGACAATAAAACGAAGCATTAACCTGA

Function

symbol description
hnmt Predicted to enable histamine N-methyltransferase activity. Predicted to be involved in histamine catabolic process and methylation. Predicted to be located in cytoplasm. Is expressed in adaxial cell and muscle pioneer. Human ortholog(s) of this gene implicated in Parkinson's disease; asthma; atopic dermatitis; autosomal recessive non-syndromic intellectual disability; and essential tremor. Orthologous to human HNMT (histamine N-methyltransferase).

NR:

description
PREDICTED: histamine N-methyltransferase isoform X1

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0046539 histamine N-methyltransferase activity molecular_function

KEGG:

id description
K00546 HNMT; histamine N-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248061.1 True 2274 mRNA 0.38 7 9570400 9574754

Neighbor

gene id symbol gene type direction distance location
chpfa chpfa,LOC107749870,LOC107663851,LOC107571864,LOC107672254,LOC107743933 coding upstream 593401 8966861 ~ 8976999 (+)
umps umps coding upstream 738498 8827690 ~ 8831902 (+)
itgav itgav,LOC107663834,LOC107672211,LOC107752904 coding upstream 746009 8801297 ~ 8824391 (+)
zc3h15 zc3h15,LOC107562108,LOC107663835,LOC107749874,LOC107752875,LOC107672221 coding upstream 772465 8793317 ~ 8797935 (+)
znf804a znf804a,LOC107562107,LOC107749875,LOC107752876,LOC107672201,LOC107663892,LOC107560471 coding upstream 868105 8651167 ~ 8702295 (+)
spopla spopla,LOC107751611,LOC107556446,LOC107720326,LOC107558043,LOC107658226,LOC107663914 coding downstream 27232 9601986 ~ 9610746 (+)
LOC122351877 ugt1a7,ugt1a5,ugt1a6,ugt1a2,LOC107663839,LOC107556441,LOC107732349,LOC107658228,LOC107658227,LOC107558044,LOC107720327 coding downstream 53860 9628614 ~ 9652625 (+)
LOC122351880 ugt1a4,LOC107663839,LOC107556441 coding downstream 58399 9633153 ~ 9636711 (+)
LOC122351879 LOC107558046,LOC107658227,LOC107558044,LOC107720327 coding downstream 62637 9637391 ~ 9639325 (+)
LOC122351881 ugt1a2,LOC107663839,LOC107732349 coding downstream 64623 9639377 ~ 9641034 (+)
G68901 NA non-coding upstream 157665 9255332 ~ 9412735 (+)
G68900 NA non-coding upstream 329013 9240938 ~ 9241387 (+)
G68897 NA non-coding upstream 376097 9180904 ~ 9194303 (+)
G68896 NA non-coding upstream 385832 9180751 ~ 9184568 (+)
G68895 NA non-coding upstream 391474 9176324 ~ 9178926 (+)
G68908 NA non-coding downstream 667 9575421 ~ 9575654 (+)
G69003 NA non-coding downstream 315897 9890651 ~ 9891580 (+)
G69028 NA non-coding downstream 480742 10055496 ~ 10056501 (+)
G69031 NA non-coding downstream 486304 10061058 ~ 10061611 (+)
G69032 NA non-coding downstream 486931 10061685 ~ 10061887 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 3403 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 409579 9156045 ~ 9160821 (+)
si:ch1073-416j23.1 si:ch1073-416j23.1,LOC107749868,LOC107663920,LOC107556448 other upstream 420307 9142592 ~ 9150093 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other upstream 698767 8867097 ~ 8871633 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other upstream 704095 8863387 ~ 8866305 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other downstream 517596 10092350 ~ 10113356 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other downstream 592582 10167336 ~ 10174783 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other downstream 753977 10328731 ~ 10395230 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 1446982 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 1890850 11465604 ~ 11490149 (+)

Expression


Co-expression Network