gjb8 (cx30.3,LOC107668881,LOC107569159,LOC107712256,LOC107597425,LOC107658209,LOC107716308)


Basic Information

Item Value
gene id gjb8
gene name cx30.3,LOC107668881,LOC107569159,LOC107712256,LOC107597425,LOC107658209,LOC107716308
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14493429 ~ 14496095 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248078.1
TCAGGTGCACTACACTTACTCTCACTGTCCTCAGTCAAATCACTTCATCTCACTCTTGAGACCACAAAGAATCTCCGCAAGTAAAAGTACCGATTTTAACTCACCTGGGCGGATATATATCATGGATTTGATCTGAATCATTTTGTAGGCTAACAGGAGCTGAGAGCAACAGCAGACAGGATGACTTGGGGAGCACTTTATGCCCAGCTGGGAGGGGTAAATAAACACTCCACCAGCTTGGGAAAGATCTGGCTGTCTGTCCTCTTCATCTTCCGCATTTGCATCCTTGTAATAGCCGCCGAAACGGTCTGGGGGGATGAGCAGTCCGACTTCATCTGTAACACACAACAGCCCGGCTGCAAGAACGTCTGCTATGACCACTTCTTTCCGGTCTCACACATTCGGTTCTGGTGCCTGCAGCTCATCTTCGTGTCTACACCGGCTTTGCTGGTGGCTATGCACGTCACTTATCGCAAACGCAATGTAAAGAAAGGACTTTTGGCCAACCGAGGTGGCGGTGCCAAAGGGGACGACCTGGAGAGCCTGAAAAAGAGGCGTCTACCCATCACCGGGTCACTGTGGTGGACCTACACCTCCAGCCTGTTCTTCCGGCTCCTTTTCGAGGCCGGATTCATGTACGCTCTGTATTACGTGTACGACGGGTTTCAGATGGCCCGTCTTGTGAAGTGTGAGCAGTGGCCCTGTCCCAACAAAGTCGACTGCTTCATCTCACGGCCCACAGAGAAAACAGTCTTCACCATCTTCATGGTGGGATCTTCTGCCATCTGCATCGTGCTGAATGTGGCTGAACTGGCCTACCTGATCGTCAAAGCATTGCTGAGGTGCTCAGCCAGAGCCAAAGGAAGACGTTCTTTTGTTCACCAAGATAAAATGTCCTCAGAAAAGGCGCACTTACAGAACGAAAAGAATGCAAGGTTGCTGTCATCCGCTTCGGACTCCTCAAGCAATAAGACTGTTTAAGATTTTCCCTACGTCCAGTGACTAATTCTACCAACACGGTACTAGGCTTGTAGACGACAGTGTTTTAACTTTTCTAATGCCATTAGCGTTAGAACTAGTATGTGTTTTTGACAGCTCTGAGTAAACAACACAGCCACCAACCTGACAGCAGGTTTCAAGCATGTTTCATTCCTGAGCTGACATTCCTCCCCTAAGCCAGAAGACAATTAGGGCGTACGTACGGCACTGTACAAACGTAAGGGGTTGttgaatttcattttttccaGATTACTCAAAAGCCTGTCACAGTGCTCTGCAGTCAGGTGGCATTAGAAAAGCCCGAGAGTGACTCCTAGTGGTCACAACGACATCAATGAAGTTCAGAGACGGTCTTTGCACAAGTTCGTGTCATTTTTTTTGAGGGATTATTTACACGATGTTGTATATAAATGCttcttttacttttgtttaCTTCTTTTCAAACGCAACTTCATTTGCTCTTTCTGTCACCCGTCACGCTTCGATCAGCTATATAATTTACAGAGCTGAGCaggatttgtgtttttgtatttatgtgtgaTTATTTTGAGCAGCGGCACATCTTTGTTTAGTAGTCTAAGTTGTTTCACGAGGCTACCTAGCACTGACCCTCATCCGGGGATTTGATATAAGCACTCCGCAGTGTCTAGGTTGTTAACAAATGAGGCTGTAGCGGCGCGGACTCTGTGAAGTCCACCTGTTGACAGGTGAGAGCCCGTGGTCTGACCGTTATCTTCCGCTGTGTTTTCCTCCTCTCTGAGAGGCTCTGCAAGTCAGCGGTgaccagttttgttttttaaggcTGTGATTAAACCGCGGCGATTACCGTTACCACGTCGTATCTATTAAGCTTCCACAAAGTATTGATGGAATTCTCTGCTGTTTCCTAAAGTGAGctgtgatctttttttttatagccacctgtttgtaattttatttgaaagtttGGCTAACAGCGTATATTTTACACGAGTATCTAAATAAATCACAACGCATTAAATGTT

Function

symbol description
cx30.3 gap junction beta-4 protein

NR:

description
gap junction beta-2 protein-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0007154 cell communication biological_process
GO:0005922 connexin complex cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005243 gap junction channel activity molecular_function

KEGG:

id description
K07621 GJB2, CX26; gap junction beta-2 protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248078.1 True 2003 mRNA 0.46 2 14493429 14496095

Neighbor

gene id symbol gene type direction distance location
gja3 gja3,LOC107668878,LOC107712277,LOC107569119,LOC107658255,LOC107597383 coding downstream 728 14486809 ~ 14492701 (-)
arhgef7a arhgef7a,LOC107712280,LOC107668898,LOC107569023,LOC107597388 coding downstream 66623 14408577 ~ 14426806 (-)
sox1a sox1a,LOC107569013,LOC107668909,LOC107658211,LOC107597426,LOC107724510 coding downstream 152806 14338698 ~ 14340623 (-)
rev1 rev1,LOC107658260,LOC107568994,LOC107668902 coding downstream 187145 14290849 ~ 14306284 (-)
txndc9 txndc9,LOC107568936,LOC107724502,LOC107668903,LOC107658261,LOC107705160,LOC107597391 coding downstream 203201 14287287 ~ 14290228 (-)
cryl1 cryl1,LOC107668879,LOC107724506,LOC107712274,LOC107658254 coding upstream 691 14496786 ~ 14506954 (-)
eef1akmt1 n6amt2,LOC107658251,LOC107668884,LOC107597381,LOC107712275,LOC107569169,LOC107724476 coding upstream 22833 14518928 ~ 14521341 (-)
xpo4 xpo4,LOC107724474,LOC107668883,LOC107569111,LOC107712270,LOC107597380,LOC107658250 coding upstream 25303 14521398 ~ 14551453 (-)
lats2 lats2,LOC107724484,LOC107569193,LOC107712271,LOC107658249,LOC107668891,LOC107597418 coding upstream 56087 14552182 ~ 14569134 (-)
LOC122351989 LOC107668905,LOC107569207,LOC107724507,LOC101884374 coding upstream 73715 14569810 ~ 14573059 (-)
G70332 LOC107724468 non-coding downstream 246101 14244287 ~ 14247328 (-)
LOC122352120 NA non-coding downstream 304428 14173817 ~ 14189001 (-)
G70309 NA non-coding downstream 568593 13924616 ~ 13924836 (-)
G70308 NA non-coding downstream 569325 13923749 ~ 13924104 (-)
G70306 NA non-coding downstream 615017 13878124 ~ 13878412 (-)
G70393 NA non-coding upstream 93763 14589858 ~ 14590275 (-)
G70396 NA non-coding upstream 98168 14594263 ~ 14595342 (-)
G70438 LOC107600383,LOC107655530,LOC107720111 non-coding upstream 420705 14916800 ~ 14918840 (-)
LOC122352110 NA non-coding upstream 441029 14937124 ~ 14942863 (-)
G70494 LOC107740907,LOC107668887,LOC107600382,LOC107720110 non-coding upstream 479317 14975412 ~ 14981853 (-)
LOC122351495 NA other downstream 120755 14359646 ~ 14372674 (-)
G70317 NA other downstream 239653 14196479 ~ 14253776 (-)
G70294 NA other downstream 553561 13938259 ~ 13939868 (-)
rif1 LOC107658288,LOC107555351,LOC107658286,LOC107725242,LOC107680950 other downstream 580486 13879570 ~ 13912943 (-)
G70261 LOC107682829,LOC107723691,LOC107555352,LOC107658202,LOC107555050 other downstream 680102 13807822 ~ 13813327 (-)
G70549 NA other upstream 807008 15303103 ~ 15305975 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other upstream 893123 15389218 ~ 15399437 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other upstream 1275326 15771421 ~ 15771864 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other upstream 2224709 16720804 ~ 16746222 (-)
G70986 pou2f1b,LOC107748141 other upstream 2321045 16817140 ~ 16823775 (-)

Expression


Co-expression Network