pttg1ipb (pttg1ipb,LOC107749904,LOC107677780,LOC107596555)


Basic Information

Item Value
gene id pttg1ipb
gene name pttg1ipb,LOC107749904,LOC107677780,LOC107596555
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 8427846 ~ 8430614 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248125.1
CGTCCGGTCCCTCCGGCAAACACATGACCAGCCAGGCCTGAGAGCAGCACAGATCCGCCGCGCTTGCCATCATGATCCGGACTCGGATTCTTTCACTCGTTGCTTTGGTTTTCTTTGCCTTCTGTTTTGTAATAGCGGCTGGTCAGACGACGAGTCCAGAAACAAACTGCTCTGTAAGATCCAACACAACTTGTGAAGAATGTCTGAAGATTGTTTCAtgCTTGTGGTGCATCTCAAGCCAGAAATGCATTGACTATCCGGTGAAAAGCATTTTGCCCGCTCACAGTGTTTGTCCGCTCTCAGAAGCACGATGGGGAGTGTGCTGGATGAATTTTCAGACTCTCATCATTACCATCTCTGTGATCGCGGGGGTCATCATCATCGCCATATTTGTctgctgcttctgctgctgtaaatgtgaaaacatCGGGTCTAAAAGGAGTGAGGAGCGAATGGAGAGACAAGCTCACCTGAGAAAGTTCCGCCAAGAGGAGAGgAAAGCAGAGATGAGGCAGAGACATGAAGAAATGCGATTGAAATACGGTTTGAAAGCGGATAACCCATACTCTAGATTTGAGAACAGCTAGGAAGCTTGTGACGCTCCGCTGTTGTCTTTTCTTTTACCTCGCTCCTATTGTAAAAatgaacatgcacacacagcaCTCCATTTTTCTTTGAGTTTGAAAGACGCGCTATACTAGTTAGCAGCTGGCCACGCAAATATACTTTGCCTTTCGcttgaaatttaaatgtaacaccTGGATATTCAATGAATCTTCAAGCAAACCACATTTAGATGCATTCATGAAGCCTTGTAAATATAGTACGTTGATGATCCGAACAAGCTTCGACCAAGTTAAGTAAAACACACTGATATTTGAGACTTCATTGGACTTTGCCTGTTTCTGGCTAAGTTGCACGGCagtgaaataattttttgtttttaacctcTGCAAATTTTTAGCTGTGTAGctttttactcaaaataaactaggcataaatataaaaatgtgcttttgtaaaTTCCTACAGTTTTCAGATTGACAGATTGATTTGTGTCTGCCTTCGCTAGTTAAACAAATTACACTGAAATTTTAATCTgtcgcaatttttttttcatgttttgattAAGAGCTTATTGTATTTGCCAAAGGGTTGATCGGTGCAATTTACAGAAGTCAAATAAACTGTGAGAGAGATATCAATAAAAGTGAATgttgta

Function

symbol description
pttg1ipb Acts upstream of or within hemopoiesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and nucleus. Is expressed in neural crest; pigment cell; pronephric duct; retina; and yolk syncytial layer. Orthologous to human PTTG1IP (PTTG1 interacting protein).

NR:

description
PREDICTED: pituitary tumor-transforming gene 1 protein-interacting protein-like

GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248125.1 True 1222 mRNA 0.41 7 8427846 8430614

Neighbor

gene id symbol gene type direction distance location
myo10l3 LOC107677785,LOC107749884,LOC107752883,LOC107668373 coding upstream 917 8366662 ~ 8426929 (+)
ankzf1 LOC107677786,LOC107749886 coding upstream 78321 8343222 ~ 8349525 (+)
LOC122351256 LOC107668397,LOC107593014,LOC107752910 coding upstream 224910 8176835 ~ 8202936 (+)
fzd7a fzd7,fzd7a,LOC107751502,LOC107752890,LOC107668396 coding upstream 254883 8170166 ~ 8172963 (+)
raph1a raph1,raph1a,LOC107752894,LOC107592998,LOC107688759,LOC107668371 coding upstream 409959 7962407 ~ 8017887 (+)
tspearb tspearb,LOC107749903,LOC107677782,LOC107752923,LOC107593006,LOC107668351 coding downstream 11746 8442360 ~ 8452673 (+)
tra2b LOC107668395,LOC107677789,LOC107592988,LOC107749892 coding downstream 22990 8453604 ~ 8459325 (+)
ehhadh ehhadh,LOC107596516 coding downstream 80098 8510712 ~ 8519346 (+)
zgc:162707 zgc:162707,cunh3orf70,LOC107749877,LOC107596553,LOC107592986 coding downstream 90320 8520934 ~ 8528871 (+)
nup35 nup35,LOC107663916,LOC107749876,LOC107668364,LOC107752922 coding downstream 135840 8566454 ~ 8569997 (+)
G68678 NA non-coding upstream 205029 8222587 ~ 8222817 (+)
G68668 NA non-coding upstream 221883 8203853 ~ 8205963 (+)
G68446 NA non-coding upstream 573568 7853481 ~ 7854278 (+)
G68435 NA non-coding upstream 1091487 7335491 ~ 7336359 (+)
G68397 desma,LOC107688742,LOC107602901,LOC107716787 non-coding upstream 1126351 7280767 ~ 7301495 (+)
LOC122351403 NA non-coding downstream 170110 8600724 ~ 8614984 (+)
G68808 NA non-coding downstream 395598 8826212 ~ 8827046 (+)
LOC122352063 NA non-coding downstream 428859 8859473 ~ 8860379 (+)
G68879 asic4a,asic4,LOC107672268,LOC107663852,LOC107560474,LOC107749871,LOC107571863 non-coding downstream 616846 9047460 ~ 9078537 (+)
G68880 NA non-coding downstream 632506 9063120 ~ 9064676 (+)
si:ch211-167j6.3 NA other upstream 85095 8341295 ~ 8342751 (+)
LOC122351907 LOC107670338,LOC107721263 other upstream 2454723 5962884 ~ 5973123 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other upstream 2542093 5883927 ~ 5885753 (+)
trnam-cau_112 NA other upstream 2970317 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 2970583 5457191 ~ 5457263 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 497 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 30130 8460744 ~ 8506143 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other downstream 432773 8863387 ~ 8866305 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other downstream 436483 8867097 ~ 8871633 (+)
si:ch1073-416j23.1 si:ch1073-416j23.1,LOC107749868,LOC107663920,LOC107556448 other downstream 711978 9142592 ~ 9150093 (+)

Expression


Co-expression Network