LOC122351222 (LOC107724482,LOC107668894,LOC107568746,LOC107658271,LOC107705167,LOC107597398,LOC103037082)


Basic Information

Item Value
gene id LOC122351222
gene name LOC107724482,LOC107668894,LOC107568746,LOC107658271,LOC107705167,LOC107597398,LOC103037082
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14204332 ~ 14208306 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248146.1
atgcagATGTTTAAGATGGGTTTTAAAatcattttttaTGAGGAGCGAAACTTTCAAGGTCGCTCCTATGAGTGCAACACTGACTGCCCAGACATGCACCCTCATTTCAATCGATGCAACTCTATCAGAGTGCAGAGTGGCTGCTGGGTCCTATATGAAAGACCCAATTACTCTGGTTTCCAGTATGTGCTAACCAGAGGTGAATATCCAGAATACCAGCACTGGATGGGTTACAATGACACCATTCGCTCATGCCGTACATTTTCCTACAAAACTGATGGATCCTACCGCATCCGGATCTACGATCGGCCAGATTTCCAAGGTCAGATGATCGAATTCAGTGACGATTGCAAGTCCATTCGTGAAAGTTTCCAGTGCCACAGCGTTCACTCTTGCAATGTCATGGAGGGGTACTGGACCTTCTACGAGCACCCCAGTTATCGAGGCCGTCAGTATTTCATGCCTCCCGGCGAGTATCGCAAGTTCAGTGACTGGGGTGCTGTGTGTGCCAACATCGGCTCCTTCCGCAGAATCACTGATTTTTAG
>XM_043248147.1
ATGAGTAAGatcattttttaTGAGGAGCGAAACTTTCAAGGTCGCTCCTATGAGTGCAACACTGACTGCCCAGACATGCACCCTCATTTCAATCGATGCAACTCTATCAGAGTGCAGAGTGGCTGCTGGGTCCTATATGAAAGACCCAATTACTCTGGTTTCCAGTATGTGCTAACCAGAGGTGAATATCCAGAATACCAGCACTGGATGGGTTACAATGACACCATTCGCTCATGCCGTACATTTTCCTACAAAACTGATGGATCCTACCGCATCCGGATCTACGATCGGCCAGATTTCCAAGGTCAGATGATCGAATTCAGTGACGATTGCAAGTCCATTCGTGAAAGTTTCCAGTGCCACAGCGTTCACTCTTGCAATGTCATGGAGGGGTACTGGACCTTCTACGAGCACCCCAGTTATCGAGGCCGTCAGTATTTCATGCCTCCCGGCGAGTATCGCAAGTTCAGTGACTGGGGTGCTGTGTGTGCCAACATCGGCTCCTTCCGCAGAATCACTGATTTTTAG

Function

NR:

description
PREDICTED: gamma-crystallin M2-like

GO: NA

KEGG:

id description
K23483 CRYG; gamma-crystallin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248146.1 True 546 mRNA 0.48 3 14204332 14208306
XM_043248147.1 False 528 mRNA 0.48 3 14204332 14205232

Neighbor

gene id symbol gene type direction distance location
crygm7 crygm7,LOC107705168,LOC107597399,LOC107724483,LOC107568737,LOC107658272,LOC105899368 coding downstream 844 14202785 ~ 14203488 (-)
si:dkey-57a22.14 LOC107724481,LOC107668873,LOC107597431,LOC107658270,LOC107705154,LOC107568754 coding downstream 2668 14200868 ~ 14201664 (-)
crygm6 crygm6,LOC107724479,LOC107568790,LOC107668857,LOC107658269,LOC107705155 coding downstream 4267 14199226 ~ 14200065 (-)
LOC122351901 si:dkey-57a22.15,LOC107668860,LOC107597434,LOC107724448,LOC107658273,LOC107568805,LOC107705156 coding downstream 6866 14196704 ~ 14197466 (-)
crygm1 crygm1,zgc:153846,LOC107568769,LOC107668858,LOC107724461,LOC107705171 coding downstream 8840 14194683 ~ 14195492 (-)
kctd12.1 kctd12.1,LOC107724452,LOC107668866,LOC107658214,LOC107705151,LOC107580341 coding upstream 67263 14275569 ~ 14277666 (-)
zgc:162944 zgc:162944,LOC107724454,LOC107597427,LOC107658212,LOC107705163,LOC108424409,LOC103034916,LOC108266838 coding upstream 75296 14283602 ~ 14285530 (-)
txndc9 txndc9,LOC107568936,LOC107724502,LOC107668903,LOC107658261,LOC107705160,LOC107597391 coding upstream 78981 14287287 ~ 14290228 (-)
rev1 rev1,LOC107658260,LOC107568994,LOC107668902 coding upstream 82543 14290849 ~ 14306284 (-)
sox1a sox1a,LOC107569013,LOC107668909,LOC107658211,LOC107597426,LOC107724510 coding upstream 130392 14338698 ~ 14340623 (-)
LOC122352120 NA non-coding downstream 15331 14173817 ~ 14189001 (-)
G70309 NA non-coding downstream 279496 13924616 ~ 13924836 (-)
G70308 NA non-coding downstream 280228 13923749 ~ 13924104 (-)
G70306 NA non-coding downstream 325920 13878124 ~ 13878412 (-)
G70305 LOC107725229,LOC107658288 non-coding downstream 327866 13873518 ~ 13876466 (-)
G70332 LOC107724468 non-coding upstream 35981 14244287 ~ 14247328 (-)
G70382 NA non-coding upstream 269026 14477332 ~ 14562992 (-)
G70393 NA non-coding upstream 381552 14589858 ~ 14590275 (-)
G70396 NA non-coding upstream 385957 14594263 ~ 14595342 (-)
G70438 LOC107600383,LOC107655530,LOC107720111 non-coding upstream 708494 14916800 ~ 14918840 (-)
G70294 NA other downstream 264464 13938259 ~ 13939868 (-)
rif1 LOC107658288,LOC107555351,LOC107658286,LOC107725242,LOC107680950 other downstream 291389 13879570 ~ 13912943 (-)
G70261 LOC107682829,LOC107723691,LOC107555352,LOC107658202,LOC107555050 other downstream 391005 13807822 ~ 13813327 (-)
tmem163a tmem163a,LOC107658221,LOC107725256,LOC107684456,LOC107555363,LOC106586306,LOC106582396 other downstream 530525 13642303 ~ 13673807 (-)
gypc gypc,LOC107723681,LOC107725252,LOC107555063,LOC107567781,LOC107684853,LOC107695565 other downstream 708665 13473135 ~ 13495667 (-)
LOC122351495 NA other upstream 151340 14359646 ~ 14372674 (-)
G70549 NA other upstream 1094797 15303103 ~ 15305975 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other upstream 1180912 15389218 ~ 15399437 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other upstream 1563115 15771421 ~ 15771864 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other upstream 2512498 16720804 ~ 16746222 (-)

Expression


Co-expression Network