dnajb2 (dnajb2,LOC107602899,LOC107668399,LOC107688744,LOC107716785,LOC107721618)


Basic Information

Item Value
gene id dnajb2
gene name dnajb2,LOC107602899,LOC107668399,LOC107688744,LOC107716785,LOC107721618
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 7329082 ~ 7336386 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248157.1
GCGCGCCGTTTTTAGGAGCGCGGCTCAGCTGACCGTGACGCACCGCTTTCGGCAGAGGGCGAGGGACGCGCGCGCGCACAGAAGTCGGGTGTCGGTTTCGCGCGAAAGTAATGACGCCCCGCGCGCCATCGGTAAACGGGCGACTCTGACGGAATTCCGTGCTCGCCGAGAGAGCGTCAGTTCCTGTGATCCGCGTCTCGGGAGTCGGGACCGAGCAGCGCTCCGCCGAGACACCCCAGACCCCGTTTAACAGAAGCGCGGCTCCTCCCGGCCGGACACACTTctaaaaaagCAACAGGTGGAGTGAGCCGAAGGCCACGATGGTGGACTACTATGATGTTCTGGGAGTGTCACGACATGCATCTCCGGATGACATCAAGAAAGCTTACAGGAAACTGGCTCTGCGGTGGCACCCTGACAAAAACCCAGACAACAAGGAAGAGGCGGAGAAAAAATTTAAGGAGATCGCAGAGGCCTATGAAGTCCTTTCAGACAAAAGCAAGCGCGACGCTTACGACAGATACGGTAGAGCAGACACGCCGAGCTCAGGCTCCGCTGGTTCTTCGTTTCCTGAGGACTTCCCAGGATTCAGCTTCACATTCCGCAGCCCAGATGAGGTGTTTCGAGAGTTCTTCGGGGGGCAGGACCCGTTCGCAGACTTCTTTGATGATTTCCCATTTGGTGGAATGCACAGTGGGTTTCACAGCTCCTCCTCCAGGCTTGGGCCCAGTCGCTTCTTCTCTTTCCCATCAGCAAATGCTGATTTCACCTCCTTCTCTTCCTCAATGGGTGGGATGGGCAGCATGGGAGGAGCAAACTTCAAGTCTGTTTCTACTTCCACCCGCATTGTCAATGGAAAACGTATTGCCACAAAAAAGGTCAGAGAAAATGGCCAGGAGCGAACAGAGGTTGAGGAGGATGGGGTTTTGAAAACTGTCCTCATCAATGGTGTGGAGGATGAGATGGCCTTAGCTCTGGAACTGAGCCGTAGAGAGCAGTCCAGTCAGCCTCCCAGACGATCCCAGCATCCTCCGCTCCGCCCCTCCAGCAACAGCTCTCCGAACCCCGCTCTGCGCTCCTACAGCGCCGCCCCGTTCTACCACTGCCCCGATGCCACTGAAGACGAGGAGGACGAAGACCTGCAGATGGCGCTGGCCTACAGCTTGTCGGAGATGGAGGCCCAGCAGCGGGCAGAGGACGTGATCTCAGGTGCTGGGGGAGGGAGGGGGAAGCAGCCAGGTGGTGGGAAGGGTGCCggtcaaaaaaacaaagatcAGAAAGAAGTACTGGATAATTCAAAAGAAAGCAGCCCCTCGTCTCCAGAGGAGAGGCTGACAGAACAGGGTCGGGATAGAGGTTCAGGAAGTGTTGTTGTACAGGATAAAGAGAATGACAAAATGGCAGCCAATGGGACTAATGTGGTAAAAAAGAGGAGGAAGTGTCAGTGCGTGGTTTGTTAGTAAAAAATATGGAGAATTAAGATGCTTGTGTGCGCGTTATAACCTTATGCTTTCATCTTATGGTTTTCCTTCCTGAAGTGTTTTGACTTACAGCTCTGTCTCTCATGGCACtgcacaaatataaatgtatttttttgcagtgaggTTTGAGCAACAGCCTGATTGCCCAAATGCGTTTGAAGGATATTTTGAAGGAGCtgtttgcaatattttacaaCCCCGTGCACAAAATGTCCCGCTGCCTGACAGGTATAAGTGAAATGGGTGTCTTGGGATATCATTTGCAGGCATTTACTGTGTAAGCAGTGTCACTATTTTAGCcagtcaggaaaaaaaaaaaaaagtggcttaCCATCGCTGGCATCAGGTTGACTGACATCTCTTCACACGGGGAGATTTGGGGATTTTGGAGAACGGTTATATGGTTAGCAAAATGGTAATGGAATTTAATGTTCAGATCTAATATTCAAACAAAGATAAATGTAAATCGTTGCACTCCAAATCAGTCGATATATGAAGTTACCCTaattttaaaagtgtgatttcTATGCTTGgaaaaaagtaaagttaaatCAAATAATTCCACGGAATTAAAAAATCGTTATCCAGTAAATGAAAAGCCACGAGACCTTGAATATTGTTGTGGACGAAGGGAGTCAGAAagattgagaaccactgctccAAACAGTTTTAATGGCTTTTCTAGCATTTAATGGATGTCTTACCGATTAGTTGACATCCCATTCCCAATGAACcttccatttatttttccagcagtaaagtttagtttgttttcacaTTCGTTAGTATTGTATTAGAAGGTAAATATCAGTTTTGCGTCTGATTTTACGGTGCATTTGTCATTCCTTCAGAGGTACCTGTTGAAcgtgaaaagtttttttttttgggaggggAAATTTTGCACAAAAACCTAAAGATAATCTGCCTCTGAGGAATCATGTTGTGAACAGCAATGAATCAGTGACTCATGGCTAGTCACGAAGAGAATGTAGATATCCAGAATTATCTCAGTTAATGAGAATGTGCCAAACTTATCATTAGTTTTATATGTATCAGAATTATTCACTATTGATATTTCGTTTGTGCCTTTTTTGTTAGAATAGAAATGCTTGGCTATTGTTGCCAGTGCTATATCTCACCTGACTGTGTTTAAGTTAGCCAAAGaaacgcattttttttttttttaatacttgtttgtgcattttgttCCATAATAGCTTTGTGATATAAAATGAACAATCAGAACAGCAATGCATAAAACAAACTAAGCACAGAAAGTTTGATTGTGATGCTAtgtgaaaattaataataataaaaaaaactacaacaaatatGTAAACTTCATTCAGGAAACAAAGTAATTGATTTACACAAAACCGCTATTTATCAAAATGTTGTGTCCTAATTCACAAGGCATATTCAGTGCTCAGAAAGTGctatttaaatgactaaatatgttaataaatgctgtttcgGTCATTGTTAACATGATGTTGTTGCTAATATGAGGAACAATAAACTGTACAATACA
>XM_043248158.1
CGCCGTTTTTAGGAGCGCGGCTCAGCTGACCGTGACGCACCGCTTTCGGCAGAGGGCGAGGGACGCGCGCGCGCACAGAAGTCGGGTGTCGGTTTCGCGCGAAAGTAATGACGCCCCGCGCGCCATCGGTAAACGGGCGACTCTGACGGAATTCCGTGCTCGCCGAGAGAGCGTCAGTTCCTGTGATCCGCGTCTCGGGAGTCGGGACCGAGCAGCGCTCCGCCGAGACACCCCAGACCCCGTTTAACAGAAGCGCGGCTCCTCCCGGCCGGACACACTTctaaaaaagCAACAGGTGGAGTGAGCCGAAGGCCACGATGGTGGACTACTATGATGTTCTGGGAGTGTCACGACATGCATCTCCGGATGACATCAAGAAAGCTTACAGGAAACTGGCTCTGCGGTGGCACCCTGACAAAAACCCAGACAACAAGGAAGAGGCGGAGAAAAAATTTAAGGAGATCGCAGAGGCCTATGAAGTCCTTTCAGACAAAAGCAAGCGCGACGCTTACGACAGATACGGTAGAGCAGACACGCCGAGCTCAGGCTCCGCTGGTTCTTCGTTTCCTGAGGACTTCCCAGGATTCAGCTTCACATTCCGCAGCCCAGATGAGGTGTTTCGAGAGTTCTTCGGGGGGCAGGACCCGTTCGCAGACTTCTTTGATGATTTCCCATTTGGTGGAATGCACAGTGGGTTTCACAGCTCCTCCTCCAGGCTTGGGCCCAGTCGCTTCTTCTCTTTCCCATCAGCAAATGCTGATTTCACCTCCTTCTCTTCCTCAATGGGTGGGATGGGCAGCATGGGAGGAGCAAACTTCAAGTCTGTTTCTACTTCCACCCGCATTGTCAATGGAAAACGTATTGCCACAAAAAAGGTCAGAGAAAATGGCCAGGAGCGAACAGAGGTTGAGGAGGATGGGGTTTTGAAAACTGTCCTCATCAATGGTGTGGAGGATGAGATGGCCTTAGCTCTGGAACTGAGCCGTAGAGAGCAGTCCAGTCAGCCTCCCAGACGATCCCAGCATCCTCCGCTCCGCCCCTCCAGCAACAGCTCTCCGAACCCCGCTCTGCGCTCCTACAGCGCCGCCCCGTTCTACCACTGCCCCGATGCCACTGAAGACGAGGAGGACGAAGACCTGCAGATGGCGCTGGCCTACAGCTTGTCGGAGATGGAGGCCCAGCAGCGGGCAGAGGACGTGATCTCAGAGTCCGACTTCCAGGCGTTCACAGGCTGACCTGTGGCTGTGACCCCCCTCTTACCCCTCCCCCGAGGTAAAACGTAGCGTAGAAGACTCTGCAGCTCTCCTCCCCGTTCATAGTTcattaacgtgtgtgtgtgtgtgtgtgtgtacctgtgagTTGAGTTTGCTGCTCCTGCTGTAGAGCATGCAGTATTCCAGGAAATTAGTGAACTCTACATGATTCATCTGTGCAGAAAAATACTTAAGAGTCAAAATTACAAAGAGTTTTATCACTTGTGTAGCTTTATTTCACCAAACACAACAGGCGACGCTAATGCTGGATTCATCCGTCTGCTCTTAACAGGTGAAGCGTTCCCCCGGTGctctgctttctctttctgcttctGTCTCTCTGCCTGGCACACCTGCTGCTCAGACCCTTTTCAAagttttatttggaaaaaaaaaaacccaggcAACACTACATAAAGGTCAAACATGTACGTGCtacgtatgtatgtgtttttgtttgtgactTGGAGAGTTGATACTGGATTGCTTTTTATATAGAAATTCAATTTGTGACCTGCACTGATCAAATGTACGAGCTAATAGAAAGTGTCTTAAAggcaaaatattaacattttaataatggatGATTCAAACCTGTGATGAATGTTGAATTGCACTTGATACGCAATATTTGAGAAGTTTAAGTTATGATAaaggtttattatttattca
>XM_043248159.1
CGCCGTTTTTAGGAGCGCGGCTCAGCTGACCGTGACGCACCGCTTTCGGCAGAGGGCGAGGGACGCGCGCGCGCACAGAAGTCGGGTGTCGGTTTCGCGCGAAAGTAATGACGCCCCGCGCGCCATCGGTAAACGGGCGACTCTGACGGAATTCCGTGCTCGCCGAGAGAGCGTCAGTTCCTGTGATCCGCGTCTCGGGAGTCGGGACCGAGCAGCGCTCCGCCGAGACACCCCAGACCCCGTTTAACAGAAGCGCGGCTCCTCCCGGCCGGACACACTTctaaaaaagCAACAGGTGGAGTGAGCCGAAGGCCACGATGGTGGACTACTATGATGTTCTGGGAGTGTCACGACATGCATCTCCGGATGACATCAAGAAAGCTTACAGGAAACTGGCTCTGCGGTGGCACCCTGACAAAAACCCAGACAACAAGGAAGAGGCGGAGAAAAAATTTAAGGAGATCGCAGAGGCCTATGAAGTCCTTTCAGACAAAAGCAAGCGCGACGCTTACGACAGATACGGTAGAGCAGACACGCCGAGCTCAGGCTCCGCTGGTTCTTCGTTTCCTGAGGACTTCCCAGGATTCAGCTTCACATTCCGCAGCCCAGATGAGGTGTTTCGAGAGTTCTTCGGGGGGCAGGACCCGTTCGCAGACTTCTTTGATGATTTCCCATTTGGTGGAATGCACAGTGGGTTTCACAGCTCCTCCTCCAGGCTTGGGCCCAGTCGCTTCTTCTCTTTCCCATCAGCAAATGCTGATTTCACCTCCTTCTCTTCCTCAATGGGTGGGATGGGCAGCATGGGAGGAGCAAACTTCAAGTCTGTTTCTACTTCCACCCGCATTGTCAATGGAAAACGTATTGCCACAAAAAAGGTCAGAGAAAATGGCCAGGAGCGAACAGAGGTTGAGGAGGATGGGGTTTTGAAAACTGTCCTCATCAATGGTGTGGAGGATGAGATGGCCTTAGCTCTGGAACTGAGCCGTAGAGAGCAGTCCAGTCAGCCTCCCAGACGATCCCAGCATCCTCCGCTCCGCCCCTCCAGCAACAGCTCTCCGAACCCCGCTCTGCGCTCCTACAGCGCCGCCCCGTTCTACCACTGCCCCGATGCCACTGAAGACGAGGAGGACGAAGACCTGCAGATGGCGCTGGCCTACAGCTTGTCGGAGATGGAGGCCCAGCAGCGGGCAGAGGACGTGATCTCAGAGTCCGACTTCCAGGCGTTCACAGGCTGACCTGTGGCTGTGACCCCCCTCTTACCCCTCCCCCGAGGTGAAGCGTTCCCCCGGTGctctgctttctctttctgcttctGTCTCTCTGCCTGGCACACCTGCTGCTCAGACCCTTTTCAAagttttatttggaaaaaaaaaaacccaggcAACACTACATAAAGGTCAAACATGTACGTGCtacgtatgtatgtgtttttgtttgtgactTGGAGAGTTGATACTGGATTGCTTTTTATATAGAAATTCAATTTGTGACCTGCACTGATCAAATGTACGAGCTAATAGAAAGTGTCTTAAAggcaaaatattaacattttaataatggatGATTCAAACCTGTGATGAATGTTGAATTGCACTTGATACGCAATATTTGAGAAGTTTAAGTTATGATAaaggtttattatttattca

Function

symbol description
dnajb2 Human ortholog(s) of this gene implicated in distal spinal muscular atrophy type 5. Orthologous to human DNAJB2 (DnaJ heat shock protein family (Hsp40) member B2).

NR:

description
dnaJ homolog subfamily B member 6-like

GO: NA

KEGG:

id description
K09508 DNAJB2; DnaJ homolog subfamily B member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248157.1 True 3012 mRNA 0.45 9 7330104 7336386
XM_043248158.1 False 1925 mRNA 0.51 10 7329082 7336383
XM_043248159.1 False 1652 mRNA 0.53 11 7329082 7336383

Neighbor

gene id symbol gene type direction distance location
desma desma,LOC107688742,LOC107602901,LOC107716787,LOC107721591,LOC107668394 coding downstream 27553 7295578 ~ 7301529 (-)
LOC122352006 bin1,LOC107688739,LOC107716789,LOC107721593,LOC107668401,LOC563561 coding downstream 60782 7259194 ~ 7268300 (-)
slc23a3 LOC107688765,LOC107716759,LOC107602874,LOC107721561 coding downstream 72469 7248019 ~ 7256613 (-)
mitd1 mitd1,LOC107688779,LOC107668392,LOC107721562,LOC107721614 coding downstream 111074 7215013 ~ 7218008 (-)
cracdla kiaa1211l,LOC107602905,LOC107688737,LOC107602875 coding downstream 114126 7200270 ~ 7214956 (-)
tuba8l3 tuba8l3,LOC107387629,LOC102223550,LOC108423972,LOC107716784 coding upstream 6721 7343107 ~ 7346286 (-)
LOC122352131 si:ch73-199e17.1,LOC107668388,LOC107716782,LOC107716784,LOC102213860,LOC101168255,LOC102793273 coding upstream 10724 7347110 ~ 7349416 (-)
si:ch211-67e16.11 si:ch211-67e16.11,LOC107596562,LOC105899123 coding upstream 544792 7881178 ~ 7892408 (-)
si:ch211-67e16.4 LOC107596547,LOC107738112,LOC107668355,LOC107688758,LOC107752914,LOC107592999 coding upstream 601666 7938052 ~ 7947805 (-)
si:ch211-67e16.3 NA coding upstream 611994 7948380 ~ 7952282 (-)
LOC122352164 NA non-coding downstream 293721 6982678 ~ 7035361 (-)
LOC122351994 NA non-coding downstream 433685 6892652 ~ 6895397 (-)
G68357 NA non-coding downstream 446106 6882585 ~ 6882976 (-)
G68328 st6gal2a,LOC107676409,LOC107721598,LOC107688722,LOC107551073,LOC107602911,LOC107716800 non-coding downstream 516067 6809848 ~ 6813015 (-)
G68333 LOC107721598,LOC107716800,LOC107688722,LOC107579700 non-coding downstream 534707 6793402 ~ 6794375 (-)
G68489 NA non-coding upstream 44904 7381290 ~ 7381508 (-)
G68555 nrp2b,LOC107688766,LOC107688751,LOC107752901 non-coding upstream 478863 7815249 ~ 7818832 (-)
G68554 nrp2b,LOC107596550,LOC107716756,LOC107688751,LOC107593002,LOC107752901 non-coding upstream 483622 7820008 ~ 7821889 (-)
LOC122352023 NA non-coding upstream 1134477 8470863 ~ 8474578 (-)
G68822 NA non-coding upstream 1425385 8761771 ~ 8835225 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other downstream 175128 7070985 ~ 7153954 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other downstream 1068013 6246900 ~ 6261069 (-)
LOC122351979 NA other downstream 1229170 6099071 ~ 6099912 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other downstream 1285157 6043275 ~ 6043925 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other downstream 1397946 5912855 ~ 5931136 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other upstream 678063 8014449 ~ 8024672 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other upstream 740082 8076468 ~ 8094847 (-)
LOC122351483 LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476 other upstream 2571802 9908188 ~ 9910178 (-)
trim13 trim13,LOC107720128,LOC107555217,LOC107663864,LOC107706093,LOC107600394,LOC107655513 other upstream 3097121 10433507 ~ 10443619 (-)
fdx1 fdx1,LOC107663820,LOC107706088,LOC107720152,LOC107655504,LOC107600437,LOC107555213,LOC107655505 other upstream 3178886 10515272 ~ 10519457 (-)

Expression


Co-expression Network