pth2ra (pth2r,LOC107733633,LOC107663806)


Basic Information

Item Value
gene id pth2ra
gene name pth2r,LOC107733633,LOC107663806
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 10628143 ~ 10670099 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248164.1
GCTCCCTGATTGAGACCGGAGGAGTGTCTCTCATTCAAGAGACCCGCTGTGAGTCCGTCGGCACAACTGACCGAAGGCATGTCTTCATGGAGTACATTTGCAAACTTTCAGGCGctttgcttttaaagttgtgcttttttttccctgcgAAGGAGACGTGAGCGCGTTTGAACTTCGCAGAACATCGACGTCTTGCGATCCAGTGCTTTTCGACAGAAACTGAAGCAGAGATTTCGGGGAGGTTTAACGATGTTTTTCACCGATGACACGAGCAGATCATGGTCACTGGGGGGTGTGAGGACACACGCAAAGTCTTAAGGGAAGAGGACCGCTTGCTATCTCGACAGAAGCTTCACCTCAGAAACATGAGGGATTGTCTCCTGTGGAACTTCGCCAAAGTGATTCTGTTCTGGACATTAGCCGATGCTCAGGCAGGTGAAGATGGTGAGATAACAGCTGAAGAACAGGTTCAGATGCTGCTGGATGCAAAGCTGCAGTGTCTACAGAAGGTCTCCACAGACGACCCTGCAGTTGGTGTTTGCGTCCCAGAGTGGGATGGTCTAATATGTTGGCCGCAAGGCTTCCCTGGAACTCTGACCAAGACCCCCTGTCCCAGATACATCTATGACTTCAACCATGCAGGACACGCTTACAGGAGGTGTGACTCTAATGGTTCCTGGGTGCTTGCAGAAAGCTCCAACAAGACATGGGTCAACTACACTGAATGCATCAAATCCCCAGAACCCAACAAAAAGAGACAGGTCTTTTTTGAAAGGCTGCACATCATGTATACAGTGGGCTATGCAGTTTCCTTCAGCTCTCTTCTAGTGGCTATCTTTATTATTGGATACTTCAGGCGCCTCCACTGCACCAGGAACTACATTCACATGCACCTGTTTGTTTCCTTCATGCTGCGTGCCGTCAGCATCTTTGTGAAGGATCACGTTGTGCACACTAGTGCCGGGCTGCAGGAATTTGACGCTGTGCTTATGAATAACTTCACCAATGCCGTGGATGTGGCACCAGTGGACACTTCACAGTATatgggTTGTAAAGTGACTGTCTTGCTGTTTATCTATTTCCTGGCTACAAACTACTACTGGATCCTGGTGGAGGGCTTGTACCTGCACAGTCTCATCTTCATGGCCTTCTTGTCTGACTCTAAGTACCTGTGGGGCTTCACTTTGATCGGATGGGgtGTTCCCGCTGTTTTTGTTGCAGCTTGGGCAGTTGTCAGGGCAACGCTGGCAGATGCAAGATGCTGGGAGCTGAGCGCAGGAAACATCAAATGGATCTACCAGGTCCCTATTCTGACAGCCATTGGGCTGAACTTCATCCTGTTTGTGAATATTGTGAGGGTCCTCGCCACCAAGATCCGCGAAACCAACGCCGGCAGATACGACACACGGAAACAATACAGGAAGCTTGCCAAATCCACGCTTGTTTTGGTGTTTGTGTTTGGAGTGCACTACATTGTGTTTGTTGGGATGCCGCACACATTTGAGGGTCTTGGCTGGGAGGTGCGGATGTATTGTGAGCTGTTCTTCAATTCTTTCCAGGGCTTCTTTGTATCTATTATCTACTGCTACTGTAATGGAGAGGTCCAGACTGAGATAAAGAAAACATGGACACGATGGAACTTAGCGTTTGACTGGAAAGGCCCAGTGGTGTGTGGGAGCTACCGCTATGGCTCTGTGTTGACGGGCCTTAACAACAGCACCAGCAGTCAGTCCCAGCTGGCTACCGGCGGCCAGGGCACCCGTTCCACCACACTCTTCTCCAGCCGAGTCTACCGCAGCAGCGGGGGGCCAACCATCAGTGCCCATGCCACACTGCCAGGATATGTGCTCAATTCGGACGCTGACAGCTTGCCACCGTCCATACCCGAGGAGCCGGAGGACAGTGCAAAGCAGGTTGATGACATCCTGCTGAAGGAGTCCCTGCCCACAAGGCCCAGCAGCGGCCTAGAGGATGACGAGGAAACTCTGTAGATAATGGCACAGTGATAGTCAGTTAAATTGGTTGTAATAGCACACAGGGCATTTGTTAAAGAGCAAAAAATGACAGTTCATCACCTGCAGGGCACAATGCTTTGGGTGGCGACAGCACACAACAGGACACTTCCTGTTAAAGCTGTGACccatagttttgtttttgacacaATGCCATATGCTGACAGATCAACATGTTCATGGCAAGATATTGCCACTCATCGCTATAACAAAAAACAGTTTACAGCAATGGAAATACTGATGGTTAAAACTTCAGGCAGTTCCTAAGTCAGCTGGGCAATTTGAATGCTGGaggttttgaattttaaactgcaatgccaattatttatttttgaaaattgacTTATTTAATTTGCTAAGAACCATGATGCCATCAAGATTTTAGTTAAAGTTAGCATGACTTCCACACATTTGTGTAGACCATGGAAGCAACGCTCAGGATAACTGATTTTCATTACGGACTACTGAATGTTGGGAGGGGCAAACCGAGTTAATGAGTTCTCCATCGTTCTTATTGTAGTATtccattacagaaaaaaactatttaataatttaataaaacttgtTTCAAATGCA
>XM_043248165.1
GCTCCCTGATTGAGACCGGAGGAGTGTCTCTCATTCAAGAGACCCGCTGTGAGTCCGTCGGCACAACTGACCGAAGGCATGTCTTCATGGAGTACATTTGCAAACTTTCAGGCGctttgcttttaaagttgtgcttttttttccctgcgAAGGAGACGTGAGCGCGTTTGAACTTCGCAGAACATCGACGTCTTGCGATCCAGTGCTTTTCGACAGAAACTGAAGCAGAGATTTCGGGGAGGTTTAACGATGTTTTTCACCGATGACACGAGCAGATCATGGTCACTGGGGGGTGTGAGGACACACGCAAAGTCTTAAGGGAAGAGGACCGCTTGCTATCTCGACAGAAGCTTCACCTCAGAAACATGAGGGATTGTCTCCTGTGGAACTTCGCCAAAGTGATTCTGTTCTGGACATTAGCCGATGCTCAGGCAGGTGAAGATGGTGAGATAACAGCTGAAGAACAGGTTCAGATGCTGCTGGATGCAAAGCTGCAGTGTCTACAGAAGGTCTCCACAGACGACCCTGCAGGACACGCTTACAGGAGGTGTGACTCTAATGGTTCCTGGGTGCTTGCAGAAAGCTCCAACAAGACATGGGTCAACTACACTGAATGCATCAAATCCCCAGAACCCAACAAAAAGAGACAGGTCTTTTTTGAAAGGCTGCACATCATGTATACAGTGGGCTATGCAGTTTCCTTCAGCTCTCTTCTAGTGGCTATCTTTATTATTGGATACTTCAGGCGCCTCCACTGCACCAGGAACTACATTCACATGCACCTGTTTGTTTCCTTCATGCTGCGTGCCGTCAGCATCTTTGTGAAGGATCACGTTGTGCACACTAGTGCCGGGCTGCAGGAATTTGACGCTGTGCTTATGAATAACTTCACCAATGCCGTGGATGTGGCACCAGTGGACACTTCACAGTATatgggTTGTAAAGTGACTGTCTTGCTGTTTATCTATTTCCTGGCTACAAACTACTACTGGATCCTGGTGGAGGGCTTGTACCTGCACAGTCTCATCTTCATGGCCTTCTTGTCTGACTCTAAGTACCTGTGGGGCTTCACTTTGATCGGATGGGgtGTTCCCGCTGTTTTTGTTGCAGCTTGGGCAGTTGTCAGGGCAACGCTGGCAGATGCAAGATGCTGGGAGCTGAGCGCAGGAAACATCAAATGGATCTACCAGGTCCCTATTCTGACAGCCATTGGGCTGAACTTCATCCTGTTTGTGAATATTGTGAGGGTCCTCGCCACCAAGATCCGCGAAACCAACGCCGGCAGATACGACACACGGAAACAATACAGGAAGCTTGCCAAATCCACGCTTGTTTTGGTGTTTGTGTTTGGAGTGCACTACATTGTGTTTGTTGGGATGCCGCACACATTTGAGGGTCTTGGCTGGGAGGTGCGGATGTATTGTGAGCTGTTCTTCAATTCTTTCCAGGGCTTCTTTGTATCTATTATCTACTGCTACTGTAATGGAGAGGTCCAGACTGAGATAAAGAAAACATGGACACGATGGAACTTAGCGTTTGACTGGAAAGGCCCAGTGGTGTGTGGGAGCTACCGCTATGGCTCTGTGTTGACGGGCCTTAACAACAGCACCAGCAGTCAGTCCCAGCTGGCTACCGGCGGCCAGGGCACCCGTTCCACCACACTCTTCTCCAGCCGAGTCTACCGCAGCAGCGGGGGGCCAACCATCAGTGCCCATGCCACACTGCCAGGATATGTGCTCAATTCGGACGCTGACAGCTTGCCACCGTCCATACCCGAGGAGCCGGAGGACAGTGCAAAGCAGGTTGATGACATCCTGCTGAAGGAGTCCCTGCCCACAAGGCCCAGCAGCGGCCTAGAGGATGACGAGGAAACTCTGTAGATAATGGCACAGTGATAGTCAGTTAAATTGGTTGTAATAGCACACAGGGCATTTGTTAAAGAGCAAAAAATGACAGTTCATCACCTGCAGGGCACAATGCTTTGGGTGGCGACAGCACACAACAGGACACTTCCTGTTAAAGCTGTGACccatagttttgtttttgacacaATGCCATATGCTGACAGATCAACATGTTCATGGCAAGATATTGCCACTCATCGCTATAACAAAAAACAGTTTACAGCAATGGAAATACTGATGGTTAAAACTTCAGGCAGTTCCTAAGTCAGCTGGGCAATTTGAATGCTGGaggttttgaattttaaactgcaatgccaattatttatttttgaaaattgacTTATTTAATTTGCTAAGAACCATGATGCCATCAAGATTTTAGTTAAAGTTAGCATGACTTCCACACATTTGTGTAGACCATGGAAGCAACGCTCAGGATAACTGATTTTCATTACGGACTACTGAATGTTGGGAGGGGCAAACCGAGTTAATGAGTTCTCCATCGTTCTTATTGTAGTATtccattacagaaaaaaactatttaataatttaataaaacttgtTTCAAATGCA

Function

symbol description
pth2r Predicted to enable G protein-coupled peptide receptor activity; parathyroid hormone receptor activity; and peptide hormone binding activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway and positive regulation of cold-induced thermogenesis. Predicted to be integral component of plasma membrane. Predicted to be active in plasma membrane.

NR:

description
parathyroid hormone 2 receptor

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0006171 cAMP biosynthetic process biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004991 parathyroid hormone receptor activity molecular_function
GO:0001653 peptide receptor activity molecular_function

KEGG:

id description
K04586 PTHR2; parathyroid hormone receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248164.1 True 2588 mRNA 0.48 13 10628143 10670099
XM_043248165.1 False 2477 mRNA 0.48 12 10628143 10670099

Neighbor

gene id symbol gene type direction distance location
hs6st3b hs6st3b,LOC107555209,LOC107733651,LOC107663930,LOC107600438,LOC107720131,LOC107655503 coding upstream 25652 10558641 ~ 10602491 (+)
dnajc3a dnajc3,dnajc3a,LOC107663878 coding upstream 96844 10526145 ~ 10531299 (+)
arhgap20 arhgap20,LOC107706091,LOC107663900 coding upstream 113077 10506310 ~ 10515066 (+)
cenpj cenpj,LOC107663885,LOC107720130 coding upstream 140838 10479422 ~ 10487305 (+)
spryd7b spryd7b,spryd7,LOC107655514 coding upstream 181670 10442070 ~ 10446473 (+)
tmem177 LOC107663823,LOC107738527,LOC107700213,LOC107579880,LOC107577552,LOC107600419 coding downstream 17218 10687317 ~ 10688788 (+)
ptpn4a LOC107733639,LOC107738498,LOC107700215,LOC107551944,LOC107663857 coding downstream 19749 10689848 ~ 10728088 (+)
epb41l5 LOC107733640,LOC107663871,LOC107738499,LOC107551945 coding downstream 59063 10729162 ~ 10755885 (+)
ramp1 ramp1,zgc:91818,LOC107733653,LOC107738500,LOC100007315 coding downstream 87142 10757241 ~ 10781253 (+)
LOC122352014 LOC107733623 coding downstream 165989 10836088 ~ 10839687 (+)
G69109 LOC107555213,LOC107706088,LOC107663820,LOC107720152,LOC107600437,LOC107655505,LOC107655504 non-coding upstream 111811 10515306 ~ 10516332 (+)
G69075 NA non-coding upstream 170057 10449007 ~ 10458086 (+)
G69080 NA non-coding upstream 170982 10448701 ~ 10457161 (+)
LOC122351945 NA non-coding upstream 193001 10423214 ~ 10435142 (+)
G69090 NA non-coding upstream 205890 10422043 ~ 10422253 (+)
G69284 NA non-coding downstream 113366 10783465 ~ 10783702 (+)
G69285 NA non-coding downstream 114263 10784362 ~ 10784599 (+)
G69286 NA non-coding downstream 116077 10786176 ~ 10786462 (+)
LOC122351147 NA non-coding downstream 133761 10803860 ~ 10814619 (+)
G69340 LOC107733630,LOC107551942,LOC107663909 non-coding downstream 163689 10833788 ~ 10834682 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 232913 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 453360 10167336 ~ 10174783 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 514787 10092350 ~ 10113356 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 1061146 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 1467322 9156045 ~ 9160821 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 351637 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 795505 11465604 ~ 11490149 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other downstream 1376400 12046499 ~ 12155804 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 1764889 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 1957436 12627535 ~ 12629535 (+)

Expression


Co-expression Network