LOC122351251 (LOC107716765,LOC107721581,LOC107551069,LOC107668359)


Basic Information

Item Value
gene id LOC122351251
gene name LOC107716765,LOC107721581,LOC107551069,LOC107668359
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 7380818 ~ 7383202 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248183.1
CAAACGTCTGTCCTAGTGCACGGAGGATGTTAGCTCTGCTATAaggaacaataataataactatgaATATGGCATACTGAATTTTAGGCaatttttcattcattgctCTAAATGGGCGCCTTTTATTCTGGCTGCTGTCCTATTCGTGAAACTCCTGAGGAGAAAGACTGTATATTAAAgtaagtgaatttttttttctcttgtagGGATACTATGTATTTAAACACAGttgtattatgaaaaatataataaataataaagtctcTAAATACAGTGTTGCCTCCACAAGGTCCAGTATGTCCAGTGGTAGTGAGCTGAAGGACAGCAGATCTGGACCTGAGAAGGAGGGGAGGACCTGGAGCAGTACTCAAACCTCCATCTCCACTACTGAGGGGGAATCAGATGTCGAATTACAAGCATTCATCAAGATGAGGAACAAAGTGGACAAAGATACTGAGgaaTGGGAGAAACTGAACTATGATATCCACACTCTGAGGTGTGCTCGTAAAGAAGTTTGTATACGCTGGAAGAAGATCTTGCTTCAGCTGGGTTACCAGAAGGAGGCAGATTCCTTACTGACCGTGAACAGACAGACGGTTCTGAGTGATTGGGAGAATGTGGAGAAAGCCAGAGAACTTCTGCGAATCGTGTCCGAGGAGACAGGCCTCTTCCCCCGTGGACTCAGCAGCGGTGAAAGATACATCTTTGTCATGGACCGCCTGGTGTCTCTGGACAGTGCTGAGGACTTTGTGAGGTTGGCCAAAGAGAAATATCCAAGAATTAAGATGTAAAGGAAGTTTTAGGGTTTggaaatgtttggaaatgtctACTGCAACTGTTTTtatcaataaattaattgttgttt

Function

NR:

description
PREDICTED: melanoregulin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248183.1 True 865 mRNA 0.42 4 7380818 7383202

Neighbor

gene id symbol gene type direction distance location
cfap65 cfap65,LOC107688747,LOC107668360,LOC107716758,LOC107735777 coding upstream 294 7367664 ~ 7380524 (+)
mnx2a mnx2a,LOC107551068,LOC107688780,LOC107602884,LOC107716783,LOC107668369,LOC107721589 coding upstream 13825 7363964 ~ 7366993 (+)
ptprna ptprna,LOC107551086,LOC107688743,LOC107716786,LOC107602900,LOC107668387,LOC107721560 coding upstream 52226 7304840 ~ 7328592 (+)
tmem198a tmem198a,LOC107688741,LOC107716788,LOC107602903,LOC107551083,LOC107721592,LOC108423970,LOC107668403 coding upstream 89276 7271362 ~ 7291542 (+)
ihha ihha,LOC107716791,LOC107688738,LOC107721594,LOC107668405,LOC107551082,LOC107602904 coding upstream 133220 7241336 ~ 7247598 (+)
fn1a fn1a,LOC107716781,LOC107688749,LOC107668382,LOC107721590 coding downstream 21150 7404352 ~ 7430484 (+)
pard3bb pard3bb,LOC107688750,LOC107716778,LOC107721601,LOC107668384,LOC107593023 coding downstream 90796 7473998 ~ 7728791 (+)
nrp2b nrp2b,LOC107688766,LOC107752901,LOC107668386,LOC107716756,LOC107596550 coding downstream 373572 7756774 ~ 7821894 (+)
abcb6b abcb6b,abcb6a,abcb6,LOC107688753,LOC107596549,LOC107716755 coding downstream 472019 7855221 ~ 7881034 (+)
ttll4 LOC107738099,LOC107688755,LOC107752897,LOC107596548,LOC107593000,LOC107668375 coding downstream 510413 7893615 ~ 7907304 (+)
G68435 NA non-coding upstream 44459 7335491 ~ 7336359 (+)
G68397 desma,LOC107688742,LOC107602901,LOC107716787 non-coding upstream 79323 7280767 ~ 7301495 (+)
G68424 NA non-coding upstream 117105 7262541 ~ 7263713 (+)
G68401 NA non-coding upstream 121424 7256680 ~ 7259394 (+)
G68405 NA non-coding upstream 181001 7199269 ~ 7199817 (+)
G68446 NA non-coding downstream 470279 7853481 ~ 7854278 (+)
G68668 NA non-coding downstream 820651 8203853 ~ 8205963 (+)
G68678 NA non-coding downstream 839385 8222587 ~ 8222817 (+)
LOC122351403 NA non-coding downstream 1217522 8600724 ~ 8614984 (+)
G68808 NA non-coding downstream 1443010 8826212 ~ 8827046 (+)
LOC122351907 LOC107670338,LOC107721263 other upstream 1407695 5962884 ~ 5973123 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other upstream 1495065 5883927 ~ 5885753 (+)
trnam-cau_112 NA other upstream 1923289 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 1923555 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 1923975 5456772 ~ 5456843 (+)
si:ch211-167j6.3 NA other downstream 958093 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 1047909 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 1077542 8460744 ~ 8506143 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other downstream 1480185 8863387 ~ 8866305 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other downstream 1483895 8867097 ~ 8871633 (+)

Expression


Co-expression Network