poglut2 (kdelc1,LOC107567637,LOC107733631,LOC107675345)


Basic Information

Item Value
gene id poglut2
gene name kdelc1,LOC107567637,LOC107733631,LOC107675345
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 11372926 ~ 11379422 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248189.1
GCGCCCGTTGCAGAGATTTTCTCACGAGGGTGTCTGGGTTGGTTTGCACACCGAGCCGCTAGTGAACGTGAGTATGTGGTGAAATGTGTCACGATGTTTTTTTAAGCGGTGTTTTTAGGAGCATTGTCACTCCGAGGAAGTGATGATAAATGAACGCGTCCACTACTGAAAGTGCCCACATCCTCTATAAACATGTTGAGAAAACTTTTGCTGCTCTTGATGCCTTGCATCATTTTCTTGACGCGGAGATCAAAGGCAGCGGCAGCGCCCAGCGCGAGCAAAACTTTGATCTGGGGTCCTGGACTGGAAACAAACATCGTCCTTCCTGCTCGGTTTTTCTTCATACAGACGGTGGACTCCACCGGAACAAATTTCACAACCTCTCCTGGAGAGAAGACATTTGAAGTGAAGATAACATCTCCAACAGACCCATATGCTAGAATCTGGATCCAGATTTTAGACCGGAATGACGGGTCCTTTCTGGTTCGGTACCGCATGTATGCCAGTTACACAGATCTGCACATTCAGATTCTCCTCAAAGACAAGCTGGTGGGAAAGTCACCATATGTGCTCAAAGGTGCAGTGTATCACGAAGCATGTGACTGCCCGGAGCCCagtggtgcattgtgggaaaaaaacatgcactgcCCGGCCTCTTTTTCTCAGATAGAGAGCGATTTATCTGTCTTTCCCAGTGTGGATCCAGAACATAACGCCCATGAGATCCTTAAGCGCTTTGGAAAAAGACACAGCCTGTGTCACTACACCATTAAAAACAACCAGgtTTATATAAAAACGCACGGAGAACATGTCGGATTCAGGATCTTCATGGATGCTTTCCTTCTGTCCCTCACACGTAAAGTCAAGCTTCCAGACATTGAGTTTTTTGTTAATTTGGGTGACTGGCCCTTGGAGAAGAGACGGGCGTCAGAGAAACCCAGCCCGATCTTTTCATGGTGCGGGTCCAATGATACACAAGACATCGTCATGCCGACATACGACCTGACTGAGTCTGTATTGGAGACTATGGGCCGAGTGAGTCTGGACATGATGTCTGTTCAGGGACACACGGGTCTAGTCTGGGAACAGAAGATCAGCAAAGCGTTCTGGAGAGGACGAGACAGCAGAAAAGAGCGTCTTGAGCTGGTTAAACTGGCACGGGCGAACCCTGACATGCTCGATGCCGCTCTAACCAACTTCTTCTTTTTCAAGCACGATGAGAGCCTTTACGGGCCCCTCGTCAAACACGTGTCcttctttgacttttttaaCTACAAGTACCAGATAAATGTTGACGGGACAGTAGCGGCGTACAGACTGCCTTATCTGCTTGCAGGGGACAGTGTGGTGTTCAAACATGACTCCATATATTATGAGCACTTTTACAAGCAGCTCCAGCCATGGGTGCACTACATCCCATTCAAAGCTGATCTCAGTGACCTGCTGGAGAAGATCCAGTGGGCTAGAGACCATGAGGAGGAGGCAAAGCGAATTGCCCTGGCAGGTCAGCAGTTTGCACGAACTCATCTGATGGGTGACAGAATATTCTGTTACTACTACAAACTCTTTCAGagGTACGCTGAACTGCAGGTCACTGAGCCCAGAGTTGCTGATGGTATGGAGCTGGTGGAACAGCCAAAGGACGAACTCTTCCCGTGTTATTGTGCAAGAAAAAAGgTCAGAGATGAGCTGTGAGAGACCGCACGTTACGTAACCGCTGCCATTAAGCTTAGACGCATTTGAAGAAGAAAAGTTTCACATTTTGTGCATCAAGTGTCTTGTGACTGCAATGTCTTAACTGGATGTTTCtctttttgtaataaatctTTGTATTTCTAAA

Function

NR:

description
KDEL motif-containing protein 1

GO:

id name namespace
GO:0005788 endoplasmic reticulum lumen cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248189.1 True 1840 mRNA 0.47 10 11372926 11379422

Neighbor

gene id symbol gene type direction distance location
stxbp5l stxbp5l,LOC107738516,LOC107663865,LOC107675353 coding upstream 355 11263726 ~ 11372571 (+)
gtf2e1 gtf2e1,LOC107733656,LOC107738514 coding upstream 128496 11232007 ~ 11244430 (+)
crygs2 crygs2,LOC107663869,LOC107551958,LOC107733648,LOC107598173,LOC107698534 coding upstream 147093 11224548 ~ 11225833 (+)
tbccd1 tbccd1,LOC107551957,LOC107663868,LOC107733647,LOC107738513,LOC107698532,LOC107598171 coding upstream 150755 11217132 ~ 11222171 (+)
dbr1 dbr1,LOC107733644,LOC107738510,LOC107663903,LOC107598170,LOC107698529,LOC107551939 coding upstream 163345 11205837 ~ 11209581 (+)
tex30 tex30,LOC107663828,LOC107567637 coding downstream 448 11379870 ~ 11381952 (+)
nepro si:dkey-22a1.3,LOC107733637 coding downstream 2970 11382392 ~ 11385994 (+)
arhgap15 arhgap15,LOC107673132,LOC107709415,LOC107555858,LOC107563181,LOC107711394,LOC107675340 coding downstream 667052 12046474 ~ 12086508 (+)
LOC122351360 arhgap15,LOC107673132,LOC107709415,LOC107555858,LOC107563181,LOC107711394,LOC107675340 coding downstream 742809 12122231 ~ 12155973 (+)
acvr2aa LOC107709421,LOC107673126,LOC107675352,LOC107601072 coding downstream 1012864 12392286 ~ 12429356 (+)
G69459 NA non-coding upstream 127448 11245151 ~ 11245478 (+)
G69417 armc8,LOC107733643,LOC107663904,LOC107551954 non-coding upstream 171761 11200651 ~ 11201165 (+)
G69403 NA non-coding upstream 282492 11063601 ~ 11090434 (+)
G69358 NA non-coding upstream 431402 10941308 ~ 10941524 (+)
G69355 NA non-coding upstream 449449 10923149 ~ 10923477 (+)
G69483 NA non-coding downstream 40783 11420205 ~ 11423317 (+)
G69518 NA non-coding downstream 600359 11979781 ~ 12009922 (+)
G69539 NA non-coding downstream 820512 12199934 ~ 12200597 (+)
G69578 NA non-coding downstream 942829 12322251 ~ 12322532 (+)
G69625 NA non-coding downstream 1077842 12457264 ~ 12457498 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other upstream 342517 11021736 ~ 11030409 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 977696 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 1198143 10167336 ~ 10174783 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 1259570 10092350 ~ 10113356 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 1805929 9443125 ~ 9566997 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 86182 11465604 ~ 11490149 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other downstream 667077 12046499 ~ 12155804 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 1055566 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 1248113 12627535 ~ 12629535 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other downstream 1352876 12732298 ~ 12803408 (+)

Expression


Co-expression Network