gja8a (cx50.5,LOC107748212,LOC107555237,LOC107720117,LOC107600427,LOC107655525)


Basic Information

Item Value
gene id gja8a
gene name cx50.5,LOC107748212,LOC107555237,LOC107720117,LOC107600427,LOC107655525
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 10082276 ~ 10086961 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248209.1
TTGGGGCCTGTGGATGGTGTCCTGTCCCTCTGGCCCCTCTGGCTGCTGTCTGTTGATCCTATTGTCTTCTGCATTAACACTCGTGGTCTGGTGCATAAAGGGCATCTGGTTAGCAGCTTAGACTCTACAGCAGGCATGAAAAGCAGCCATCATAGCCCATTCGCTCACATCTGCTCAGTGGTGCGACAAGGACGTGGTCTGAGTCTGGGTGACTGGGGGACAGGAGTTCAATTCGCCCCACGGGCCCCAGGAGCACAGACTGAACTGGACCGCACTGGACCCTCCGCTGTGCAAAGGTGACCATTTAAACTCAGCTCactttggctttattttttatgcaatagcttttttttgtccagaTTTGGTTTATGTCTAAGATAGCTTAAACCATTGAATGCGAGTCTATTGGTTACATGTTTTGGCAATGGCATATCTGAGTCTTGCAGTTGTTTCCTGATCCTTTTtgtaaatggttttgtttttaaagaagtttaCTGATTAATGAGAAGgttcatttgaaaaatattttttgtaacatctCAAGAATAACTTTATTATGAATCtctgtatataaaaaacaacCGAAAGCGTATATTATTCAGgtttatgtaaaataacttaaaaagaCGCGGACCATCTTGTTTCTCCCTAATTCCCATTTGTCTTTCTTGTGCACAGCTAACACACAAACATGGGAGACTGGAGCTCCTTGGGTAATATTTTGGAGGAAGTAAATGAACACTCCACTGTGATTGGCCGTGTTTGGCTCACagttcttttcattttccgcaTTTTAATTCTGGGAACGGCGGCAGAGTTTGTTTGGGGAGACGAGCAGTCTGATTACGTATGCAACACTCAGCAGCCAGGTTGCGAGAATGTGTGTTACGACGAGGCCTTTCCAATCTCCCATATCCGTCTATGGGTGTTACAAATCATTTTTGTGTCCACTCCTTCGCTCGTATACGTCGGCCATGCTGTCCATTACATCCACATGGAGGAAAAGCGAAAGGAGCGTGAAGAAGCCGAGGTTAGCCACCAACAGGAAATAGGCGAAGAGCGTCTTCCGCTTCCAGATCAGGGAAGTGTTCGGACCACCAAGGAAACTAGCACAAAAGGTAGCAAAAAGTTCAGACTCGAAGGCACTCTACTCTTCACCTACATATGCCATATAATCTTCAAAGCTCTTTTTGAAGTAGGCTTCGTAGTTGGACAGTACTTCCTCTATGGTTTCCGCATCCTACCACTGTACAAGTGCAGTCGTTGGCCCTGCCCCAACACGGTGGACTGCTACGTCTCCCGGCCCACTGAAAAGACCATCTTCATCATTTTTATGCTTGCAGTTGCTTGCGTTTCACTGTTCCTCAACTTTGTGGAGATCAGCCACCTCGCCTTAAAGAAGATCCGATTTGTTTTTCACCGACCAGCTCCGGCACAATTGGAGTCTCTTGGACCACCTGAGAGGAGCTTACCGTTTCTCCTGACCACCCCTGTTGAAAAAGCCAAGGGTTACAGGCGCCTTGAAGAGGAGAAGAAAGATGAGGTGGCACACATATATCCACTAGCTGAGGTCGGTATGGAAGAGGGCCAATTCTTCTCACCTCAgctggagaaggagaagaaaaggAGTCAGGAGGTGGTTATGCCAACAGTGCCACCTGTAGAGGAGACAATTATATGCGATGAGACTCAACCCTACTTCATTCAGGTCACTGAGACACTGTCAGAGCTTCCACCAGAAGAGCTACTTCGGGAAGGAGATGAGGTAGACAGCATAAAGACTCCAACAGCTTTACCAGAAGTACTGGAGGAGCGTTCAGAAGTGGAAAGCATGGAGGAAACGTATTTAATATCACTTGAGGAGAGTTTGGATATAGATCTAGTAGAACTGGTCTGTAGAGAGGTGACTGAGGAAAAGTCAGCGAAGGAGAGTAGCTTGATAGATGTTGAGcaaacacaagaagaaaaacTTTCAGGATctgaagaagaaaaggaaatcTCACAGGAAATTGAGGAAAAAGAGATTAACACCTTTGAGGTCCAGGAGTTGAAGGAAGAAGGGAGTTTACCTGATGTGGCTGAGGAAGAGACAGCAGGTGAGGTGTCTGATGAAGAGAGAGAATTTTGTGAAATTGAACCTTTTGTGAATGAGGACATTTTGGAAAAGGTGAAAACTTTAGATGCTGGTGAGATAACTGAGGTTCTGGACGTGTCTAAAATATCTGAGGGCGAGCAAGAGTCTGAGGCTTTTGGAGAGGTTGCAGGGTCAAACTTATCTGACATAGAGCCCATTGAGGATGAAGTGGATATGGGAGGAGACACATCTAAGGGGGGTGAAGAAGATCTAGAAGGGGATGGAGTTCAACTGGATGCAGTAGACTCAGAAGTGGCAAAAGCTTTAGAGGAAGTAGTAGATATTGTAAAGGATGAATCTATAGAGGGTCTAGTGGATCCAGGAAGAAGTTGTGAGTTACAAGATGTATTACATACAGGTAAGGATGAAGATTTAGAAAATCTAAATGAAGTTAGACCTTTTGATACCGCAGTCAATAAAGGTGAGGAGGTTTTAGAACAGGTGGAAACTTTGGAAAAGGAGGAGGTATCTTTGAGCATAGAAGATCCAGTGGAGGTTCAAGTCTCTAGGGAGTGTGATGTGTCAGGGAAAAAGGATTCTGTGGAAATTGTAGACCCAGAAAAGGAGGAATGTTCTGAAGAAATTAAGGCTGTGGAGGCCACACAGGAGATGACAGATGTTTCTCTGGAACTAGAGAAAACAGAGGAATCGAGATCATTAAGTCGTCTCAGCAAAGGTAGCAGTAGAGCCAGGTCAGATGATCTTACAATATGAAGAAGAAACTTGACATAGAACAATTCCCAAGTGCCACATTATCAGGTGAATCATTGCACGTGCATGTTTTCTtgatcagggtttttttttcatgaaatgccCAAAGTATGATCATCCCCTTGCAGAGGAATCTCATACTGGATGTATATACTTTAGGTATAAAAACCCATTTATATTGTATGAGAAAAAATATTAGGAATATCACTGTGACCACCTAGGAGTTCTGAATACAAATTTATTGTATCCAGAAATGTATTATCTAGTAGTATTCTAGATGATacaaaattaatctaaaaagaaagccaaaggtacaaaaaaatcaagaacaattaataatttgtatattatggaaataaaaaattacaatctTCATTCTAAAAGTAGTAGCTTATTTCTCACAgtggaaaatatttttcagtgaaaggacatacttttcaaacacaatttaaatatcctttttttaatcttgcttTTCAGAAAGACCCTTCGTTTATTTATTCCACTTATACTGTAAATCAAATGCAAGATAATAATAGAGAGTGGCATTCAGAATTTCTATCTGTCTATTGCTTTGACTATTTATGTTAATCTATACATTTGcctattattgttttatgattatCCTGGGCCATAATAATTGTGTTGTTGTTAATATCTCTTATCTACAATCaatttgtttacagcatttacaTTCCTTTCCAGTAACATCTGAAATGCTGACACAAAGATCATTAAAAAGACAGAATATTGTAAATGAGAACTGGTAGGGTTTGAATGCAGGTAACAAGACTAATACTTATATGGACTGTATCACCAAAAAaaatacctgtttttttttttttttttttttgaagatgctAAATAAAGATAGCACACTGACTGATGACCACTTGTGCTGTTTGTATTCCTATAAATATGACATCAACTACTTTTTTTCAAAGTgcaataaaactgtatttgcagaaaaaatataaacatagtgacattttataaaaactacatttgtgACATCTAGTGGTCATGCACTGAAAGAATAACAACCTAAAGAAAATTACAGTACAAACTCAGGAGAATTGAAAGTTGAAGTTGAAACGTAAAAAATCTCAAAGCAACCCTTCttcaaaccaaaacaaaacaggaaaaagaacatgaaatgtgtcaaaatatttttttagtatgaGTGTGACATTGTGGGTGTTTGCAACTTCAGACACATATTTTGCAACCTTGACACAAACAGGTCCATCATACATTTGCAAAGTGTGTCTACTGTGCGCTGACATATTAGTTATACAGTGATGCCAAGGTGAGGATTTGATAATTAGGTCTTTCAAAAGATGCAGTTCAACTGATGATTGTCAACCtagaaatggaaagaaaatataGTCACTGAAAACAACCTTCTACTGTTATTTTTCCTTTCCCATGCTTTCTTCGGTTCTCTTTCCAGATGATGAAATGTTTCCATATGAAGGAAGAATTTCAACTCTCCCTTTCTTGTAAATGCAGCTTCTTATGCTTACATGAAGTGTGAAATTACCTATAATAAATTGTCCGCaattatataacatttcaaGAGATAAGGCtgattgtcaccaagccagcagagggagcccttacctctggatgaCCTGtgttcactccctctgctgctacttcctgttttgagACTAGAAATTCTGAAGCGGGCCCCTCActtgcaggttgcattgtttgtttgttcatggtTAGTCTAGCCTTGTGTTTCCCTTGTcgtagattctttggttttgaccctgcctgtctttaaTCTCTTTGAtcgtttgctgcctgacccgacctctgcctgtttttgaatt

Function

NR:

description
PREDICTED: gap junction alpha-8 protein

GO:

id name namespace
GO:0007154 cell communication biological_process
GO:0005922 connexin complex cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248209.1 True 4686 mRNA 0.40 1 10082276 10086961

Neighbor

gene id symbol gene type direction distance location
si:dkey-229b18.3 LOC107748215,LOC107663849,LOC107720115,LOC107655527,LOC107572534 coding upstream 30742 10042165 ~ 10051534 (+)
chaf1b chaf1b,LOC107748217,LOC107663888,LOC107655528,LOC107720114,LOC107572528 coding upstream 43914 10030801 ~ 10038362 (+)
LOC122351209 LOC107748218 coding upstream 51724 10022693 ~ 10030552 (+)
LOC122351208 LOC107663876,LOC107707766,LOC107724486,LOC107569399 coding upstream 60046 10007942 ~ 10022230 (+)
LOC122351484 LOC107663876,LOC107707766,LOC107724486,LOC107569399 coding upstream 75764 9993877 ~ 10006512 (+)
asb11 asb11,LOC107748226,LOC107720119,LOC107655497,LOC107600386 coding downstream 27033 10113994 ~ 10117548 (+)
sytl5 sytl5,LOC107555233,LOC107663897,LOC107748209,LOC107655524 coding downstream 30900 10117861 ~ 10139245 (+)
otc otc,LOC107555229,LOC107663890 coding downstream 73380 10160341 ~ 10162936 (+)
mid1ip1a mid1ip1,mid1ip1a,LOC107655494,LOC107748224,LOC107663855,LOC107555231,LOC107600390 coding downstream 78219 10165180 ~ 10166422 (+)
impg2a impg2,LOC107748205,LOC107655518,LOC107600387,LOC107720123 coding downstream 98785 10185746 ~ 10200828 (+)
G69034 NA non-coding upstream 11385 10070658 ~ 10070891 (+)
G69033 cx45.6,LOC107663873,LOC107748213,LOC107572527,LOC107655501,LOC107720145,LOC107600426 non-coding upstream 19840 10062208 ~ 10062436 (+)
G69032 NA non-coding upstream 20389 10061685 ~ 10061887 (+)
G69031 NA non-coding upstream 20665 10061058 ~ 10061611 (+)
G69028 NA non-coding upstream 25775 10055496 ~ 10056501 (+)
G69042 NA non-coding downstream 20879 10107840 ~ 10108184 (+)
LOC122351843 NA non-coding downstream 88087 10175048 ~ 10179380 (+)
G69089 NA non-coding downstream 333521 10420482 ~ 10420692 (+)
G69090 NA non-coding downstream 335082 10422043 ~ 10422253 (+)
LOC122351945 NA non-coding downstream 336253 10423214 ~ 10435142 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 515279 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 921455 9156045 ~ 9160821 (+)
si:ch1073-416j23.1 si:ch1073-416j23.1,LOC107749868,LOC107663920,LOC107556448 other upstream 932183 9142592 ~ 9150093 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other upstream 1210643 8867097 ~ 8871633 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other upstream 1215971 8863387 ~ 8866305 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other downstream 5389 10092350 ~ 10113356 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other downstream 80375 10167336 ~ 10174783 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other downstream 241770 10328731 ~ 10395230 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 934775 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 1378643 11465604 ~ 11490149 (+)

Expression


Co-expression Network