LOC122351270 (LOC107730457,LOC107549918,LOC107670341,LOC107752618)


Basic Information

Item Value
gene id LOC122351270
gene name LOC107730457,LOC107549918,LOC107670341,LOC107752618
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5975136 ~ 5978878 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248234.1
tattccattttaatttatttacttcaatAAACCATTTCCCCCCTGAAAACCGTGTTTTGCCCATTTTAAGGCGTTTACGACCGCATAAGCAAATATAACTGTAAGTAACGTTCTTGCCTTtacacaacttttattttgatagcatGGCAGGCAGCTTAGGCTACTCTATGGCTTCCACGAACGCCAGAAACTGATTTCCCTTTGTTTACAGCATCAGCGGCACCGTCGCTGTCAGTTCGAGTGGTTTTCGCATAAACGTGCACGCGCTTCTCGCGTGACCACAAGTCTCCGTTCGGTATCAAACGCGCTCATCCGTGGGGGGTTTATACCCGGAGCGAGTCGATCGCGGGGGACGATGTTAACGGTTCTGGCGgTTTGAGGGTGCGCGTTCATCTCCGAGTCGCCCGACATGTCTCACTCCTCCAAGCCCCGATCCCACCCCTGCGGCCTTTGCGACAAGTCGTTTCCCCAGATCTCCATGCTCGCCAAGCACCAGCAGGTCCACGCCGAAGACAAGCCCTACAAATGTCCCTACTGCGACAAGTCTTTCACTCTGTCTTCTCGTCTGGTCCTGCACAAACGCACCCACGCTGGGGAGAAGCCTCACACCTGCCGGCTGTGCTCCAAGACCTTCATCTCTTCGTCCCACCTGTCCCTGCACCTGCGCTCGCACACCGGCGAGAGGAAGTACAAATGCAGCGTGTGTTCCAAAATGTTCATGCAGTCGTCGCAGCTGATGCGCCACAAGAccatccacaccggagagaaacccttCAAATGCCCGGATTGCAATAAATGCTTCGGGCGCGCCTCGCACCTGAAAACCCACCGAAGGCTCCACACCGGCGAAAAACCCTTTAAGTGCACGCAGTGCGACAGGGCGTTCACGCAAAAGGCCGGACTCATTATACACTTGCGCTTGCACACCGGTGAGCGCCCTTTTAAGTGTGACAAATGCGGCAAGGCCTTCCGTACCTCAGCCCATCTGCTCAACCATCAGGCTCTGGAGCTGGGAGAGGGCAGGTACGTCTGCGCCGCGTGCAACAAGGGCTTCCGGTCGGTGTCCATGCTGAAACAACACGAGAAGAGCCACCAGGGCGGCGGGATGCTGTGCTGCAGCGTGTGCTCGGGGCCCTTCGCCCCTTCCTCCTACCTGCAGCTCCAGGTGCACTTGCGAAACGGAGAGCAGCTCTTCCACTGCAAGGTGTGCAACAAGATCTTCGCGAAGATGTCCACTTTCGAGAAACACTGCAAAAGGCACCAGGCGGAGGCGGACGGAGGCGAGGACGAGGAAGCGAAGGAGGAGGATACCCGCGACCCCCCGTTCGAGCTGCATGCCGCCGCGTCTCCATCGGCGTCCACGTCCGAAGTCAACACGCGCTCCAAAACGAGAGCCAAAATTAGGAGCACGATGGAAAGCTCGTGAGAATTCGTGTTCGCTTTGtgtctttttgtgtgtgatatAAACGATGCTTTCATATGCTCTTAGCTGACCACGAGCGCTTGCTTTTGCACATGTTTTcacaatttcttttattattcttttgtcaaaaaaaaaaatggtacgGTATCTTATCAGCTTTGAAGATGCTGGCAGTGCATAGTTAGTTTAAATTCCACTTTGTGTGGGGAGGAACCGATTCTTTACTTCGTTTTGCACAATCCCatgaaaaatactaaaacgtagtactgtacatactgtatgtaaaaatCTAAGAGAATCAGGAGGAACAAAGTGTCCGTTCTGCTAAGAATGTAATAGCTATTCAGCAGAAATCAGCACAGAACATGTTGAAACACGTTCAGATGGGGCCAGACCATTTCGTAATGCACAATTGCTGAactttatgtttatgtaatacgGTGTAATACTGGTGTGCAATCGGCTGCTTGCAACCGACGAATACAGAGGATGTATAAACGCTAGAAGCTTTGTCAGTTTATGCAGGATTATCATAATCCACAGTGTATTATGCAGCGAGCAATGATCGATTATTCTGctaatgcaacatttatttaaaataaaaacgtgaaatattgtaaaaataaatttctgCAGTCGTTTCCGTTTTATCGCaaaatttatattgtgtatGCCGCGGCTGACGTCCGCCTGGGGGTCAGCGTATCTAAACAATGAATATTCAGCTATGTGCATTTTATGTGCACACGTAGAAGTTTATTGTCGTTTTTTTAACtgattgaatgcatccttgttgatTGTtagtttctttcaaaaaaccCTAACTGACCTCAAACATATGAACTGTGAcatgtttcattttcaaaggCACACATATGCTGTCCAACCTTAGGGCGGGAGCGTATAACGcatgacatttatttagttattttgtataagttttggaaaacaaaacaaaatggggaTGATTTTGCCCTCTTACTTCCAGTGAGTCAAAATAACTTGCTATGTTCATCCAGCTTtatatgaaatacaataaaatgttaacaaatga

Function

NR:

description
PREDICTED: zinc finger protein 239-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248234.1 True 2477 mRNA 0.48 2 5975136 5978878

Neighbor

gene id symbol gene type direction distance location
LOC122351906 LOC107670338,LOC107721263 coding downstream 75493 5888893 ~ 5899643 (-)
LOC122351923 LOC107549895,LOC107549742,LOC107689504,LOC107752607,LOC107720938 coding downstream 98745 5875474 ~ 5876391 (-)
LOC122351462 LOC107549895,LOC107689504,LOC107720938,LOC107752607,LOC107549742 coding downstream 99769 5874669 ~ 5875367 (-)
LOC122351461 si:dkeyp-118h9.7,LOC107689504,LOC107549742,LOC107752607,LOC107549895,LOC107720938 coding downstream 100480 5873593 ~ 5874656 (-)
LOC122351910 farp1,LOC107689492,LOC107747234 coding downstream 178987 5766330 ~ 5796149 (-)
LOC122351466 LOC107670336,LOC107720941 coding upstream 90867 6069745 ~ 6087019 (-)
LOC122351467 abi2,LOC107738105,LOC107752895 coding upstream 109591 6088469 ~ 6098804 (-)
myo16 myo16,LOC107716764,LOC107688718 coding upstream 340212 6319090 ~ 6477546 (-)
tnfsf13b tnfsf13b,LOC107702981,LOC107688720,LOC107721586 coding upstream 508360 6487238 ~ 6492356 (-)
abhd13 abhd13,LOC107570096,LOC107702974,LOC107688719,LOC107551070 coding upstream 513731 6492609 ~ 6498204 (-)
G68082 NA non-coding downstream 168809 5805940 ~ 5806327 (-)
G68055 NA non-coding downstream 239353 5735337 ~ 5735783 (-)
G68053 NA non-coding downstream 239964 5734924 ~ 5735172 (-)
G68048 NA non-coding downstream 259499 5715341 ~ 5715637 (-)
G67917 NA non-coding downstream 793636 5141790 ~ 5181500 (-)
G68120 dip2a non-coding upstream 66237 6045115 ~ 6047596 (-)
LOC122351301 NA non-coding upstream 138973 6117851 ~ 6142682 (-)
G68189 NA non-coding upstream 262444 6241322 ~ 6241602 (-)
G68265 NA non-coding upstream 701217 6680095 ~ 6683011 (-)
G68266 NA non-coding upstream 718808 6697686 ~ 6697893 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other downstream 44000 5912855 ~ 5931136 (-)
LOC122351915 LOC108191338,LOC101883771,LOC101885620 other downstream 575256 5396865 ~ 5399880 (-)
LOC122351925 NA other downstream 605547 5349955 ~ 5369589 (-)
G67930 LOC107670337 other downstream 866749 5105894 ~ 5108387 (-)
G67912 NA other downstream 945661 5028926 ~ 5029475 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other upstream 64397 6043275 ~ 6043925 (-)
LOC122351979 NA other upstream 120193 6099071 ~ 6099912 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other upstream 268022 6246900 ~ 6261069 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other upstream 1092107 7070985 ~ 7153954 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other upstream 2035571 8014449 ~ 8024672 (-)

Expression


Co-expression Network