pofut2 (LOC107741944,LOC107660604,LOC107714363,LOC107657505,LOC107565035)


Basic Information

Item Value
gene id pofut2
gene name LOC107741944,LOC107660604,LOC107714363,LOC107657505,LOC107565035
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19636451 ~ 19642933 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248250.1
ATGTTTACGGTTATATTAAACTTTGATAGCTGCGAAAAGGAGCGAACGCCTATATTAAACCGGGTCGGGAAAGAGGTGACGGAGTTGCTAGGCAACTGTACCGACGCCGGAAGTGCGTGGCTACAAAAGACATGGCGAACAAGAGGGGAACAGCTGTGCCTGCACCCTCTCGTGATATTTTACGATCTCATTCGGTATTAATCCTtgcctttttattatataaattcgCTTCCGCTTCAGAGGGCGATGCATTTCGTGCCGGACAGTCGATATTGTCTCCGGTGGCTGCGGCATCACGGGATGTTCGATACCTCCTGTATGATGTAAATCCACCCGAGGGCTTCAATCTTCGCAGAGATGTATACATTCGCATGGCCTCTTTGCTGAAAACGCTGAGGAAAGAGGGCGACTGGGTGCTAGTGCTGCCTCCATGGGGTCGCCTGTATCACTGGCAGAGCCCTGATATACATCAGGTTCGAATCCCGTGGGGGGAATTCTTCAGCATAACCAGTCTGCAGGCTAACATACCAGTCATGGAGTATGAGGAGTTTATTGCCGAGTCTGGGGGTCCCTTCATTGACCAGATCCTTGTGCTGCAGAGCTATGCAGAGGGCTGGACGGATGGGAAATGGGAGGAGAAGGTGGATGAACGAGTGTGCATCGAAAAGCTAATGTACTCAAAAGACAAACAGGGTTATTACAGaGGTTGGTTTTGGGGTTATGAGGAGACCAGAGCGTTGAATGTCACCTGCTTATCTTCTCAGGGACATGCCTCTATCTTGGCTCCTGTCTTACAAAATAACTTAACCGCCGTGTCAGTAATGCTGGACAGAGCTGAGACTGTCCTTCATGACCACTATGCTGGGAAAGACTATTGGGATACACGGCGAAGTATGGTGTTTGCCAAACACCTGCGTATCATAGGAGATGAGTTTAGGGCCAAGTATCTCAACTCCACAGACAAACAGGACCAGACCTCGTACAACGAAGACTGGACTCGAATGAACAACAGACTGGGCAGCGCTAAGGGAGGCCCTTACCTGGGAGTGCACTTACGTAGGAAAGACTTCATCTGGGGGCACAGAGAAGACGTGCCCAGCCTCAAAGGAGCAGTGAAAAAGATACACAGTCTCATGAAGAAGCACAAGCTTCAAAAAGTCTTTGTTGCCACTGATTCAGATGGAGAAGAGCTCGCTAAACTGAAAAGGATGCTACCTGAGATGGTACGATACGAGCCCACCTGGGAGGACCTGGAGCTCCTGAAAGATGGAGGGGTGGCCATCATAGACCAGTGGATTTGTGCTCATGCTAGgTATTTCATTGGAACATCAGTTTCAACGTTCTCTTTTAGAATACACGAGGAACGGGAGATCCTGGGTTTCGATCCTAAAACCACCTACAACCGATTCTGCGGTGACGACGAGAAAGAATGCGAACAACCAACACACTGGAAAATAGTTTACTGATCACACAGAACTTGATACTGATTATTCAGACTATAGGCTATTTGATTTCTCAGATTTAAGAGAATCCtctatatttttaatgcttttgctGACCATGTTGAAAATACAGTCTTTTAATGGAACAGTTGAATATTTACACCCTtcgggccatccaagatgtagatgagagtcttcatcagaacagattaggggaaatttagcattaattaATTTGCTCATCGGTGGCttctctgcggtgaatgggtgccgtcataatAAAAGCTCAAACAGCtgactaaaaacatcactgTAATGCAAAAGAAATTTTGGATAacctgagggtgaataatttttcagctattttttttatatatatttaagggTGTACTATTTGTCCAATGGCAGTGCCAATGGGTTTTCACTGCATAACAAGTTAGTTAAGGAAGGTAAGGTGAGACGTAAGTGGAATATATCAAATAACTTTGATCTCATATCTTGTTTTAGATGTGTAATTTGTATATGCTGCTGCTCTGTTCTCACAGTTCTTTGATTCGGATTGTTGATACTCAAGATGAACTGTGTATAGCACTGTGATCAAATCTTTTATGAAAACGgtcaacattatttttcaccCCTGTTCCCGTCTTTTGAAGTGCTACGTGCCAATTATTTTCGTCTCAGCACATTTTATGCCTTTGACAAATAACATGTCTGAACATCCAGCGTTAGTGTTTGATATTTCTGTCAGTATTGTGCCTGTCTGCTATTTGGACAAATGAAAATAGTGCTTTCACAGACTTTgccatacagtattttttacactcagtaagtgttttttttcccctttcgtAAGATGACGTGAAAGATTCCGGGAGGTGTACAAAACATGTCGGTAAAGATAAGTCTCTGGAATGGAAGCGTTTGTTTTCATAACTTGATGACAGACAGTAGAAGGGGTTTGTCTTGTATATTTCTTCTTGTTCAGAAATGTCGATTTATGTTTACCATTCAAAGATGTACTGTATATTCATCATGTGCAGTTTttctataaatgttttcttggtttattttctaaatgaaattttaatgatCACTTGA

Function

NR:

description
GDP-fucose protein O-fucosyltransferase 2-like

GO:

id name namespace
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG:

id description
K03691 POFUT; peptide-O-fucosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248250.1 True 2543 mRNA 0.43 9 19636451 19642933

Neighbor

gene id symbol gene type direction distance location
abca12 LOC107657499,LOC107714367,LOC107602131,LOC107660608,LOC107741931,LOC107565025 coding downstream 1650 19569168 ~ 19634801 (-)
bard1 LOC107741928,LOC107660605,LOC107602130 coding downstream 67691 19546224 ~ 19568760 (-)
ikzf2 si:zfos-1425h8.1,LOC107741927,LOC107660609,LOC107662042,LOC107721023,LOC107556196,LOC107568511 coding downstream 351228 19259729 ~ 19285223 (-)
LOC122351886 erbb4,LOC107741926,LOC107660610,LOC107721020,LOC107662043,LOC107555909 coding downstream 387276 18980278 ~ 19249175 (-)
myl1 myl1,LOC107721018,LOC107673729,LOC107596080,LOC107660614,LOC107555938 coding downstream 746396 18885444 ~ 18890055 (-)
pms1 pms1,LOC107602147,LOC107728929,LOC107660601,LOC107714373,LOC107565013 coding upstream 41957 19684890 ~ 19708970 (-)
adat3 LOC107728938,LOC107714375,LOC107681677,LOC107565014,LOC107660599,LOC107602133 coding upstream 70552 19713485 ~ 19716443 (-)
asnsd1 asnsd1,LOC107728934,LOC107660596,LOC107714374 coding upstream 90967 19733900 ~ 19736121 (-)
LOC122352057 NA coding upstream 93100 19736033 ~ 19737211 (-)
wdr75 wdr75,LOC107660592,LOC107714378,LOC107728907,LOC107657531,LOC107602136,LOC107565028 coding upstream 107609 19750542 ~ 19766793 (-)
G71587 NA non-coding downstream 92604 19458787 ~ 19543847 (-)
LOC122351304 NA non-coding downstream 110861 19519740 ~ 19525590 (-)
LOC122351387 NA non-coding downstream 128366 19496912 ~ 19508085 (-)
LOC122351235 NA non-coding downstream 177351 19443445 ~ 19459100 (-)
LOC122351981 NA non-coding downstream 382203 19251637 ~ 19254248 (-)
G71667 cunh2orf88,LOC107728910,LOC107657540,LOC107714370,LOC798500,LOC103027948 non-coding upstream 24067 19667000 ~ 19671164 (-)
LOC122351289 NA non-coding upstream 31798 19674731 ~ 19681399 (-)
G71645 NA non-coding upstream 66451 19709384 ~ 19712184 (-)
G71692 NA non-coding upstream 148314 19791247 ~ 19791560 (-)
G71727 NA non-coding upstream 244242 19887175 ~ 19941547 (-)
LOC122352185 NA other downstream 1066569 18569755 ~ 18569882 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other downstream 1270184 18251236 ~ 18366267 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other downstream 2114891 17364187 ~ 17521560 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other downstream 2380960 17235872 ~ 17255491 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 2746904 16886753 ~ 16889547 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 77009 19719942 ~ 19731794 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other upstream 153319 19796252 ~ 19829475 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other upstream 190987 19833920 ~ 19852625 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other upstream 238617 19881550 ~ 19893315 (-)
G71938 nab1,LOC107565022 other upstream 846231 20489164 ~ 20503890 (-)

Expression


Co-expression Network