cdk5r2b (LOC107562111,LOC107749900,LOC107672300,LOC107560468,LOC107752915,LOC107663905)


Basic Information

Item Value
gene id cdk5r2b
gene name LOC107562111,LOC107749900,LOC107672300,LOC107560468,LOC107752915,LOC107663905
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 8876681 ~ 8879088 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248259.1
tcgACTCTTTCAGCGCTAAGTAGGTTAAATGGAAGAGCCGAGGAGAGAATCGCGCCCTGTCTGGGAATAGCGCGACTATACTTGGCTCATGCGGTCTAAATATTCCCCCTTCTGAAGCGATAATGTGAACGCAGGCGCTCGCTTCTATTGGCGCTTCAGCCTGTCATTCGTCTCCCGAAGCCCCGAGGTTGGCTAATTACGCAGACACGTTGGGATAATCCCGGTTGGCAGAAGCTGATGTCAGATTGGTTTGGCTAACCGCAAATCCGCTCTAGTTGAGGTGGGCAATGCAGGACTAGCTTGCGGTCACTGCTGCGGGAGGAGTGGAGGGAGAGCCTGGCTGCTCGGGAATTTCATTTCTGATGGGCTGTCAGTCCACCTGCTAACCTGCCCGCTTCACTGACCAAATGGAGCTGTCCTTGTGATCCGACGCGCTCGATCTCCACCGCGACGTCTCCGCGCTCGCAGGGCCGTAACGTAAGAGTTTTGTCTGCGCGCTCTGCGATATGGGGACCGTGCTCTCTATATCCCCTATAGCGACTAAGGGGACCATTCTGAAAGATGGAGAAGACGAAGCCAACGGGAAAATCGAGAAAAGCTTTAAAAGGCAGTCTGTGGTCGTGTCCACGCTCACGTTTAAGCGGTTAGTGACCGCATCGAGTAAGAAGAAAAGTGCCAAGAAAGTCAGCCCGAATCCTCTTCCTCTGCCCGCGAGCAGCGACTGTCAGGTGGagcatctgaatcaggagaacTCCAAGAAATCGAAACAGTCcgagaagaaaacaaagaatGGACCTCTCGCCGTGCCCATCCCCACGGTCCCTCCCCATCCGGACCAGGAGCAGGAGCAGTTCACTCCAGCGGCGAAGCAACTGGTGTCGGTCCAGAAGCAGCCCAGCAGCCGGTCGCTCGTCTCGCCGCGGCGCGTGATCGTCCAGGCCTCCACCGGGGAGCTGCTCCGTTGTCTGGGCGAATTCCTGTGCAAGCGATGCTGCAGAGTCGGGGAGCTCACCCCAAACGAGGTTATCCTCTGGTTCCGAAACGTGGACAGGACTCTGCTGCTGCAGGGCTGGCAGGACCACGGCTTCATCACGCCTGCCAACCTCGTGTTCGTCTATCTGCTCGTTAGGGAAACCGTGACCGAGGATGTCGACAGTCCGCGTGAACTCCACGGGACCTTTCTGACCTGCCTCTATCTGGCGTATTCCTACATAGGGAACGAGATCTCGTACCCTCTCAAGCCCTTCATGGTCGACACCAATAAGGACGTGTTTTGGGATCGTTCGTTAGATGTCATCGATAAACTCAGCGGCAAAATGCTGCAGATAAACATGGATCCGCACTTTTTCACAGAGGTTTTCCAAGACTTAAAAAACGAAGGAGATTATAAGAAGGATGCGAGCGAACTGGATCGCTGAGTGCGGTCAGAATCTCAGCAGAGATCAATTGCTTCTGATTTATTTGGAGGTAATTGTAATCAGCTCTGCCTCAATGACTGTTACGTTGCACCTTGAGCCGATTTATCAATTTAGTATTTATGACACTGTTGTGTTGGCTTTGTTTTATCAGTATTAAGTAGCCCCGGTGAAGTGATTTGTAATAGCCAACTTGGCTTCACCGGTGTAGCTGCAGTTTTATGCATGTCGTATAAATTTACATCTGTTGCCGTGATTCACAGTCACTCATAAAAAAGGGAACGCGCAACTTTTATTCCACATAAAGTCAGCCTCATCTGTCATTTCTAAGTTATCCGGGTCACTATTCTCCTGAGACCTAAAGTTGCGTATTTTAGATCTGTTGTTGCATTACaattgttttatgtcatttaagTGTTTGGTGTAGCCTTTCCAGCATACTTATATTCGTTTAGCTCCAAAAACATATACACCATTTGTGTTGTATTGTGAAAAACGACTGGAAGCTGCTGTGTCAAGGATTGAATGGTACTAGCGCGGACCAGCGTGGGTCTCAGGAGGATGATGCTCCACTTGAAGAGACGTGAACGGAACTATCCAAGGTGCTGACCTATTTATGCTCGTGTGCTCTACTGACAGACACTTGTCTCCGGCCATTCTGGATTTGAAACTTGAAAGTGTTTTCTCTTCTCTGAGAGCTTCTATGTGCCAATTCTTGGGTGATCTGATCGTTTCACACTGGTTTGAGGAAAATGGGCGGATCGCGCTTggagattatttttaatactttgagGTGATTCTTCAGTGCTCTTTCttgaatttaataaaagccaGTCTAACTGGTTTTCTTGCACAAGCTCATTAATGCACTGACTACGTGCCATTTGACGACATACTTTAAGGTCATATAACATTGATAGGTTCAGCTGATCTTTGGGACAAGCCATCTTATCATTTATCTCTACAGTGTACAATAAAACTGGAAATCTCTTC

Function

NR:

description
PREDICTED: cyclin-dependent kinase 5 activator 2

GO:

id name namespace
GO:0016533 protein kinase 5 complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248259.1 True 2408 mRNA 0.49 1 8876681 8879088

Neighbor

gene id symbol gene type direction distance location
si:dkey-69o16.5 si:dkey-69o16.5,LOC107663837,LOC107749873,LOC108411906,LOC100708275 coding downstream 49632 8824663 ~ 8827049 (-)
tmem41aa tmem41aa,LOC107749879,LOC107596517,LOC107663880,LOC107668406,LOC107752878,LOC107593004,LOC105908658,LOC108410768 coding downstream 366395 8506932 ~ 8510286 (-)
glb1l glb1l,LOC107596522,LOC107677787,LOC107752925,LOC107749887 coding downstream 520825 8349238 ~ 8355856 (-)
LOC122351780 LOC107677781,LOC107749905,LOC107596523,LOC107752886,LOC107668380,LOC107593025,LOC100003133 coding downstream 535221 8338994 ~ 8341460 (-)
trnak-uuu_106 NA coding downstream 535666 8340943 ~ 8341015 (-)
wnt10a wnt10a,LOC107663825,LOC107672309,LOC107562105,LOC107560469 coding upstream 40775 8919863 ~ 8934331 (-)
wnt6b wnt6b,wnt6,LOC107562106,LOC107663826,LOC107560470,LOC107672249 coding upstream 63771 8942859 ~ 8961374 (-)
asic4a asic4a,LOC107672268,LOC107560474,LOC107663852,LOC107749871,LOC107571863,LOC106586149 coding upstream 99430 8978518 ~ 9048802 (-)
gmppaa gmppaa,LOC107556449,LOC105902665,LOC106581839 coding upstream 271104 9150192 ~ 9155280 (-)
dars1 dars,LOC107676220,LOC107663896,LOC102778528,LOC107706104 coding upstream 281221 9160309 ~ 9184553 (-)
G68822 NA non-coding downstream 41456 8761771 ~ 8835225 (-)
G68844 NA non-coding downstream 52294 8822356 ~ 8824387 (-)
G68839 NA non-coding downstream 59063 8816520 ~ 8817618 (-)
G68830 NA non-coding downstream 71276 8802385 ~ 8805405 (-)
G68826 NA non-coding downstream 74932 8793861 ~ 8801749 (-)
G68857 NA non-coding upstream 39453 8918541 ~ 8919746 (-)
G68948 NA non-coding upstream 359029 9238117 ~ 9238462 (-)
G68981 NA non-coding upstream 728216 9607304 ~ 9610739 (-)
G68987 ugt1a4,LOC107556441,LOC107663842,LOC107663839,LOC107558044,LOC107658227,LOC107720327,LOC107558046 non-coding upstream 752945 9632033 ~ 9652602 (-)
G68988 NA non-coding upstream 775028 9654116 ~ 9654567 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other downstream 781834 8076468 ~ 8094847 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other downstream 852009 8014449 ~ 8024672 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other downstream 1722727 7070985 ~ 7153954 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other downstream 2615612 6246900 ~ 6261069 (-)
LOC122351979 NA other downstream 2776769 6099071 ~ 6099912 (-)
LOC122351483 LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476 other upstream 1029100 9908188 ~ 9910178 (-)
trim13 trim13,LOC107720128,LOC107555217,LOC107663864,LOC107706093,LOC107600394,LOC107655513 other upstream 1554419 10433507 ~ 10443619 (-)
fdx1 fdx1,LOC107663820,LOC107706088,LOC107720152,LOC107655504,LOC107600437,LOC107555213,LOC107655505 other upstream 1636184 10515272 ~ 10519457 (-)
mrasa LOC107551943,LOC107663912,LOC107733654,LOC107600440,LOC107738526 other upstream 1801070 10680158 ~ 10686627 (-)
LOC122351858 slc10a2,LOC107663831,LOC107567642,LOC107675341,LOC107738529 other upstream 2517578 11396666 ~ 11493120 (-)

Expression


Co-expression Network