LOC122351306 (LOC107695589,LOC107555072,LOC107725238,LOC107601065,LOC107571720,LOC107739951,LOC107670699,LOC107555073)


Basic Information

Item Value
gene id LOC122351306
gene name LOC107695589,LOC107555072,LOC107725238,LOC107601065,LOC107571720,LOC107739951,LOC107670699,LOC107555073
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13211745 ~ 13213541 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248268.1
TGTGCCGTGTATATATTGTGCCAAAGTGGGCCGTTTATGTATTGTGCCGTTGGCGTTTAGTGGATGGTTTGAGAGCTgtggcaaaaaagaaaaaaaaaccaaaacaaacatgaCCGCACAGACAGTGTTGATTGTGTACGCGCACCAGAGCGCAGGATCTTTCAATGCGGCTGTTAAAAACGCTTCTGTGGACGCGCTGAAAAAACAGGGCTGCAACGTGCTTGTGTCTGACCTGTATGACATGAAATTCAAGGCCACGGCTACAGAGGACGATATTGCTGGACCAGTGAAGAACCCAGAGCATTTCTGTTATGGAAATGAGACCATGTTGGCTTTGCAGGAGGGACGACTAGCTTCTGATATTGTAGATGAGCACAAGAAACTAAAAGAAGCGGATCTTGTTATTTTTCAGTTCCCCATGTACTGGTTCTCTGTTCCCGCCATCATGAAAGGCTGGATGGACCGGGTTCTTACACGTGGTTTTGCATATACCTTAGAAAAGCGCTACAGTGAGGGCGTCTTCAGGGAAAAGAAAGCCATGTTATCCTTCACTACTGGTTCCAATGAAACCATGTTCAGCTCCAATGGGATCAATGGAGACATGAATGTTACACTGTGGCCAATTCAAaaTGGGGTCCTCAACTATTGTGGCTTCCAGGTCCTTGCTCCCCAGATCTTCTGGGCACCCACACTTCTCTCTCCTGAGGCTCGTGAAGGCCTGTTGCAAGGCTGGCATACTCGTCTTGAAGGCCTCCTAAATGAGGCACCTCTCACTTTTCCACCCGTAGATGTTTTTGATGAGGGGAAAGGCTTTCAGTTGAAACCTGAAGTCCGCGAGAAACATGCTGAATCTCCTTTTGGTCTCACTGTGGGTCACCACTTGGAGAAACCTCTTCCACCTCACAACCAGATGAAGGCTGGGGTGTGAGACCGGGTGCAATGTGGCCCCCCTGTGGCTATGTCTAATACTCCCAAGCTGAtgttaaacatgaataaattgtttgttttggg

Function

NR:

description
PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone]-like

GO: NA

KEGG:

id description
K08071 NQO2; ribosyldihydronicotinamide dehydrogenase (quinone)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248268.1 True 1011 mRNA 0.48 6 13211745 13213541

Neighbor

gene id symbol gene type direction distance location
tyw5 tyw5,LOC107725219,LOC107728297 coding upstream 32358 13176613 ~ 13179387 (+)
c9h2orf69 zgc:153521,LOC107718378,LOC107675339,LOC107601069,LOC107555833 coding upstream 90702 13118279 ~ 13121043 (+)
nabp1a nabp1a,nabp1,LOC107728291,LOC107670711,LOC107718374,LOC107555843 coding upstream 98796 13109217 ~ 13112949 (+)
trnas-cga_5 NA coding upstream 103249 13108415 ~ 13108496 (+)
cavin2a sdpra,LOC107728296,LOC107670717,LOC107555844,LOC107675358,LOC107601077,LOC107718373 coding upstream 105534 13094152 ~ 13106211 (+)
ackr3a ackr3a,LOC107670701,LOC107555037,LOC107725223,LOC107695574,LOC107571721 coding downstream 6082 13219623 ~ 13225136 (+)
rpe rpe,LOC107695573,LOC107725216,LOC106919839 coding downstream 18765 13232306 ~ 13235269 (+)
LOC122351698 col6a3,LOC107685998,LOC107723650,LOC107695585,LOC107725234 coding downstream 46720 13260261 ~ 13348573 (+)
LOC122351699 LOC107567775,LOC107739950,LOC107670696 coding downstream 62451 13275992 ~ 13278596 (+)
asb18 asb18,LOC107723656,LOC107686685,LOC107567774 coding downstream 149525 13363066 ~ 13370927 (+)
G69796 stk17b non-coding upstream 77906 13130098 ~ 13133839 (+)
G69789 NA non-coding upstream 103913 13107595 ~ 13107832 (+)
G69783 NA non-coding upstream 104988 13106280 ~ 13106757 (+)
G69723 NA non-coding upstream 371594 12837719 ~ 12840151 (+)
G69718 NA non-coding upstream 437895 12773334 ~ 12773850 (+)
G69985 NA non-coding downstream 302148 13515689 ~ 13518237 (+)
G70021 NA non-coding downstream 455565 13669106 ~ 13669444 (+)
G70029 map3k19,LOC107684057,LOC107723646,LOC107555330,LOC107725236,LOC107658294 non-coding downstream 472255 13685796 ~ 13686466 (+)
LOC122351436 LOC107555330 non-coding downstream 473124 13686665 ~ 13689033 (+)
G70032 NA non-coding downstream 478673 13692214 ~ 13692487 (+)
G69755 NA other upstream 225767 12984868 ~ 12985978 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other upstream 408337 12732298 ~ 12803408 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other upstream 582210 12627535 ~ 12629535 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other upstream 759380 12434988 ~ 12452365 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other upstream 1055941 12046499 ~ 12155804 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other downstream 76152 13289693 ~ 13304591 (+)
ccnt2a ccnt2a,LOC107658298,LOC107725237,LOC107723659,LOC107684218,LOC107555058,LOC107555362 other downstream 462622 13676163 ~ 13684835 (+)
LOC122351767 NA other downstream 1373541 14587082 ~ 14589439 (+)
si:ch211-168k14.2 si:ch211-168k14.2,LOC107681321,LOC107748618,LOC108441415,LOC105905900,LOC108266656,LOC107600399 other downstream 2187586 15401127 ~ 15425361 (+)
LOC122351678 hspe1,mob4,LOC107690609,LOC107595852,LOC107569672,LOC107731766,LOC106586370,LOC105016277,LOC100701317,LOC103156730,LOC101472107,LOC102310674,LOC102783361,LOC108238849,LOC107690608,LOC106582314,LOC105899369 other downstream 2494660 15708201 ~ 15715901 (+)

Expression


Co-expression Network