si:ch211-160b11.4



Basic Information


Item Value
gene id si:ch211-160b11.4
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17196411 ~ 17198391 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043248269.1
TATTGTGCTCTCAGAAACGTGGCCAGATAGAGACGGCCATAAACCTGTATTATATTAGCTGCACTTGGATCTCACAGCACTGAGAGAATTGCAGCTGAAGAGTTAGTACAGACCAACATTGGTAGGCAAGTTCCCTGTTAAAAAAGTGAGTCTTTGGAGATTTTCGACAAGATGAGAAAATTGTTCTTCTTGGTTCTCACCATAACAGCTTCTTTAGCTTTTGCCAGTCCACTAGTTCAGGATGAGAAGCTTCCTGATCTAGTGGTGAAGGAGCCAGAGGTTGAGAAAGAACTGACAGTAGAGCgcaaagaagaagaagcaggtTCCCTGGTGCAGGATAAAGCTGTTGCAGATTCAGTGTTGCTGGAGCCCGAgacaacagagaaaaaaagagtacCAGAAGAGACACGAGTGATGTTGGAGGAACCTGTGCTAGTGGCAGATTACCTCATTGAAGAGGTGCCAGAGACAATACTACAGCCTGAGCTGGAAATAACCGCCACTGGGCTGGACAAAAACATTGTGGAGGAAGTTGTAGCAGAGTTAGAGtctgaaacaaatattaaagtggacgaaaaagaagaaaatgtagtGAAGGAGGTGCCTACACTTGAGGCTGACTATATTATAGCTGAAGATCCAGAAATGCAAATGGACCTGGAAGGGAAAGATGAAGGACACCGCATATTTTAGCTTAGATGTGTGGGGAAAAGAAAGATATGTGTGATAAAACCAATTATACGAATTGTATACATCATCTGgaggctgaataaataagctttgcatTGATGTACGGTTTGTTAAATATCGtgacaatatttggcagaaatacaactatttgaagatcttgaatctgagggtgcaagaaaataaaaaaaatgtccttatAATTTTGGAAATGACGTCCTTAGCTTGGCATATCACTAATAAAAAAttggttttgatatatttacagtaggaaatgtaaaaacaaaaattttcatggaacatgatctttattatattatatatattctaatgattttggcataaaaaattattttgacccatactgtttattgttggttattgctacaaatatacccctgCTACTTATGTCTGGTTTTGACCCGGGCCAGGGTCACATATGGAAAGATGACTGTATCCTCGGGGTGGTGGACCTGTCAAGGAGTTGTGGTGTATAGAATTACCTGCAAATAATGAATGTACCTTTTcaacaaacatataaaaatttCAATTGAAACCGAAActgaaaatgtctttgaaactgaaaaataaaaaaatgtattaattgcg
>XM_043248270.1
AGAATTGCAGCTGAAGAGTTAGTACAGACCAACATTGATTTTCTTTCAGGTAGGCAAGTTCCCTGTTAAAAAAGTGAGTCTTTGGAGATTTTCGACAAGATGAGAAAATTGTTCTTCTTGGTTCTCACCATAACAGCTTCTTTAGCTTTTGCCAGTCCACTAGTTCAGGATGAGAAGCTTCCTGATCTAGTGGTGAAGGAGCCAGAGGTTGAGAAAGAACTGACAGTAGAGCgcaaagaagaagaagcaggtTCCCTGGTGCAGGATAAAGCTGTTGCAGATTCAGTGTTGCTGGAGCCCGAgacaacagagaaaaaaagagtacCAGAAGAGACACGAGTGATGTTGGAGGAACCTGTGCTAGTGGCAGATTACCTCATTGAAGAGGTGCCAGAGACAATACTACAGCCTGAGCTGGAAATAACCGCCACTGGGCTGGACAAAAACATTGTGGAGGAAGTTGTAGCAGAGTTAGAGtctgaaacaaatattaaagtggacgaaaaagaagaaaatgtagtGAAGGAGGTGCCTACACTTGAGGCTGACTATATTATAGCTGAAGATCCAGAAATGCAAATGGACCTGGAAGGGAAAGATGAAGGACACCGCATATTTTAGCTTAGATGTGTGGGGAAAAGAAAGATATGTGTGATAAAACCAATTATACGAATTGTATACATCATCTGgaggctgaataaataagctttgcatTGATGTACGGTTTGTTAAATATCGtgacaatatttggcagaaatacaactatttgaagatcttgaatctgagggtgcaagaaaataaaaaaaatgtccttatAATTTTGGAAATGACGTCCTTAGCTTGGCATATCACTAATAAAAAAttggttttgatatatttacagtaggaaatgtaaaaacaaaaattttcatggaacatgatctttattatattatatatattctaatgattttggcataaaaaattattttgacccatactgtttattgttggttattgctacaaatatacccctgCTACTTATGTCTGGTTTTGACCCGGGCCAGGGTCACATATGGAAAGATGACTGTATCCTCGGGGTGGTGGACCTGTCAAGGAGTTGTGGTGTATAGAATTACCTGCAAATAATGAATGTACCTTTTcaacaaacatataaaaatttCAATTGAAACCGAAActgaaaatgtctttgaaactgaaaaataaaaaaatgtattaattgcg
>XM_043248271.1
CTGCACTTGGATCTCACAGCACTGAGAGAATTGCAGCTGAAGAGTTAGTACAGACCAACATTGGCAAGTTCCCTGTTAAAAAAGTGAGTCTTTGGAGATTTTCGACAAGATGAGAAAATTGTTCTTCTTGGTTCTCACCATAACAGCTTCTTTAGCTTTTGCCAGTCCACTAGTTCAGGATGAGAAGCTTCCTGATCTAGTGGTGAAGGAGCCAGAGGTTGAGAAAGAACTGACAGTAGAGCgcaaagaagaagaagcaggtTCCCTGGTGCAGGATAAAGCTGTTGCAGATTCAGTGTTGCTGGAGCCCGAgacaacagagaaaaaaagagtacCAGAAGAGACACGAGTGATGTTGGAGGAACCTGTGCTAGTGGCAGATTACCTCATTGAAGAGGTGCCAGAGACAATACTACAGCCTGAGCTGGAAATAACCGCCACTGGGCTGGACAAAAACATTGTGGAGGAAGTTGTAGCAGAGTTAGAGtctgaaacaaatattaaagtggacgaaaaagaagaaaatgtagtGAAGGAGGTGCCTACACTTGAGGCTGACTATATTATAGCTGAAGATCCAGAAATGCAAATGGACCTGGAAGGGAAAGATGAAGGACACCGCATATTTTAGCTTAGATGTGTGGGGAAAAGAAAGATATGTGTGATAAAACCAATTATACGAATTGTATACATCATCTGgaggctgaataaataagctttgcatTGATGTACGGTTTGTTAAATATCGtgacaatatttggcagaaatacaactatttgaagatcttgaatctgagggtgcaagaaaataaaaaaaatgtccttatAATTTTGGAAATGACGTCCTTAGCTTGGCATATCACTAATAAAAAAttggttttgatatatttacagtaggaaatgtaaaaacaaaaattttcatggaacatgatctttattatattatatatattctaatgattttggcataaaaaattattttgacccatactgtttattgttggttattgctacaaatatacccctgCTACTTATGTCTGGTTTTGACCCGGGCCAGGGTCACATATGGAAAGATGACTGTATCCTCGGGGTGGTGGACCTGTCAAGGAGTTGTGGTGTATAGAATTACCTGCAAATAATGAATGTACCTTTTcaacaaacatataaaaatttCAATTGAAACCGAAActgaaaatgtctttgaaactgaaaaataaaaaaatgtattaattgcg
>XM_043248272.1
CTATTGTGCTCTCAGAAACGTGGCCAGATAGAGACGGCCATAAACCTGTATTATATTAGCTGCACTTGGATCTCACAGCACTGAGAGAATTGCAGCTGAAGAGTTAGTACAGACCAACATTGGTAGGCAAGTTCCCTGTTAAAAAAGTGAGTCTTTGGAGATTTTCGACAAGATGAGAAAATTGTTCTTCTTGGTTCTCACCATAACAGCTTTTGCCAGTCCACTAGTTCAGGATGAGAAGCTTCCTGATCTAGTGGTGAAGGAGCCAGAGGTTGAGAAAGAACTGACAGTAGAGCgcaaagaagaagaagcaggtTCCCTGGTGCAGGATAAAGCTGTTGCAGATTCAGTGTTGCTGGAGCCCGAgacaacagagaaaaaaagagtacCAGAAGAGACACGAGTGATGTTGGAGGAACCTGTGCTAGTGGCAGATTACCTCATTGAAGAGGTGCCAGAGACAATACTACAGCCTGAGCTGGAAATAACCGCCACTGGGCTGGACAAAAACATTGTGGAGGAAGTTGTAGCAGAGTTAGAGtctgaaacaaatattaaagtggacgaaaaagaagaaaatgtagtGAAGGAGGTGCCTACACTTGAGGCTGACTATATTATAGCTGAAGATCCAGAAATGCAAATGGACCTGGAAGGGAAAGATGAAGGACACCGCATATTTTAGCTTAGATGTGTGGGGAAAAGAAAGATATGTGTGATAAAACCAATTATACGAATTGTATACATCATCTGgaggctgaataaataagctttgcatTGATGTACGGTTTGTTAAATATCGtgacaatatttggcagaaatacaactatttgaagatcttgaatctgagggtgcaagaaaataaaaaaaatgtccttatAATTTTGGAAATGACGTCCTTAGCTTGGCATATCACTAATAAAAAAttggttttgatatatttacagtaggaaatgtaaaaacaaaaattttcatggaacatgatctttattatattatatatattctaatgattttggcataaaaaattattttgacccatactgtttattgttggttattgctacaaatatacccctgCTACTTATGTCTGGTTTTGACCCGGGCCAGGGTCACATATGGAAAGATGACTGTATCCTCGGGGTGGTGGACCTGTCAAGGAGTTGTGGTGTATAGAATTACCTGCAAATAATGAATGTACCTTTTcaacaaacatataaaaatttCAATTGAAACCGAAActgaaaatgtctttgaaactgaaaaataaaaaaatgtattaattgcg
>XM_043248273.1
ATTTTCTTTCAGGTAGGCAAGTTCCCTGTTAAAAAAGTGAGTCTTTGGAGATTTTCGACAAGATGAGAAAATTGTTCTTCTTGGTTCTCACCATAACAGCTTTTGCCAGTCCACTAGTTCAGGATGAGAAGCTTCCTGATCTAGTGGTGAAGGAGCCAGAGGTTGAGAAAGAACTGACAGTAGAGCgcaaagaagaagaagcaggtTCCCTGGTGCAGGATAAAGCTGTTGCAGATTCAGTGTTGCTGGAGCCCGAgacaacagagaaaaaaagagtacCAGAAGAGACACGAGTGATGTTGGAGGAACCTGTGCTAGTGGCAGATTACCTCATTGAAGAGGTGCCAGAGACAATACTACAGCCTGAGCTGGAAATAACCGCCACTGGGCTGGACAAAAACATTGTGGAGGAAGTTGTAGCAGAGTTAGAGtctgaaacaaatattaaagtggacgaaaaagaagaaaatgtagtGAAGGAGGTGCCTACACTTGAGGCTGACTATATTATAGCTGAAGATCCAGAAATGCAAATGGACCTGGAAGGGAAAGATGAAGGACACCGCATATTTTAGCTTAGATGTGTGGGGAAAAGAAAGATATGTGTGATAAAACCAATTATACGAATTGTATACATCATCTGgaggctgaataaataagctttgcatTGATGTACGGTTTGTTAAATATCGtgacaatatttggcagaaatacaactatttgaagatcttgaatctgagggtgcaagaaaataaaaaaaatgtccttatAATTTTGGAAATGACGTCCTTAGCTTGGCATATCACTAATAAAAAAttggttttgatatatttacagtaggaaatgtaaaaacaaaaattttcatggaacatgatctttattatattatatatattctaatgattttggcataaaaaattattttgacccatactgtttattgttggttattgctacaaatatacccctgCTACTTATGTCTGGTTTTGACCCGGGCCAGGGTCACATATGGAAAGATGACTGTATCCTCGGGGTGGTGGACCTGTCAAGGAGTTGTGGTGTATAGAATTACCTGCAAATAATGAATGTACCTTTTcaacaaacatataaaaatttCAATTGAAACCGAAActgaaaatgtctttgaaactgaaaaataaaaaaatgtattaattgcg
>XM_043248274.1
CTCACAGCACTGAGAGAATTGCAGCTGAAGAGTTAGTACAGACCAACATTGGCAAGTTCCCTGTTAAAAAAGTGAGTCTTTGGAGATTTTCGACAAGATGAGAAAATTGTTCTTCTTGGTTCTCACCATAACAGCTTTTGCCAGTCCACTAGTTCAGGATGAGAAGCTTCCTGATCTAGTGGTGAAGGAGCCAGAGGTTGAGAAAGAACTGACAGTAGAGCgcaaagaagaagaagcaggtTCCCTGGTGCAGGATAAAGCTGTTGCAGATTCAGTGTTGCTGGAGCCCGAgacaacagagaaaaaaagagtacCAGAAGAGACACGAGTGATGTTGGAGGAACCTGTGCTAGTGGCAGATTACCTCATTGAAGAGGTGCCAGAGACAATACTACAGCCTGAGCTGGAAATAACCGCCACTGGGCTGGACAAAAACATTGTGGAGGAAGTTGTAGCAGAGTTAGAGtctgaaacaaatattaaagtggacgaaaaagaagaaaatgtagtGAAGGAGGTGCCTACACTTGAGGCTGACTATATTATAGCTGAAGATCCAGAAATGCAAATGGACCTGGAAGGGAAAGATGAAGGACACCGCATATTTTAGCTTAGATGTGTGGGGAAAAGAAAGATATGTGTGATAAAACCAATTATACGAATTGTATACATCATCTGgaggctgaataaataagctttgcatTGATGTACGGTTTGTTAAATATCGtgacaatatttggcagaaatacaactatttgaagatcttgaatctgagggtgcaagaaaataaaaaaaatgtccttatAATTTTGGAAATGACGTCCTTAGCTTGGCATATCACTAATAAAAAAttggttttgatatatttacagtaggaaatgtaaaaacaaaaattttcatggaacatgatctttattatattatatatattctaatgattttggcataaaaaattattttgacccatactgtttattgttggttattgctacaaatatacccctgCTACTTATGTCTGGTTTTGACCCGGGCCAGGGTCACATATGGAAAGATGACTGTATCCTCGGGGTGGTGGACCTGTCAAGGAGTTGTGGTGTATAGAATTACCTGCAAATAATGAATGTACCTTTTcaacaaacatataaaaatttCAATTGAAACCGAAActgaaaatgtctttgaaactgaaaaataaaaaaatgtattaattgcg

Function


NR:

description
PREDICTED: pulmonary surfactant-associated protein D-like

GO:

id name namespace
GO:0006030 chitin metabolic process biological_process
GO:0006032 chitin catabolic process biological_process
GO:0046348 amino sugar catabolic process biological_process
GO:1901072 glucosamine-containing compound catabolic process biological_process
GO:0006026 aminoglycan catabolic process biological_process

KEGG:

id description
ko04974 Protein digestion and absorption

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043248269.1 True 1296 mRNA 0.38 4 17196411 17198390
XM_043248270.1 False 1224 mRNA 0.38 4 17196411 17198306
XM_043248271.1 False 1234 mRNA 0.38 4 17196411 17198332
XM_043248272.1 False 1288 mRNA 0.38 4 17196411 17198391
XM_043248273.1 False 1178 mRNA 0.37 3 17196411 17198048
XM_043248274.1 False 1213 mRNA 0.38 4 17196411 17198320

Neighbor


gene id symbol gene type direction distance location
mettl21cb zgc:172067,LOC107673723,LOC107748129,LOC107597488 coding downstream 4269 17188746 ~ 17192142 (-)
dcun1d2a dcun1d2a,LOC107597495,LOC107673709,LOC108426072,LOC103045446,LOC107756765 coding downstream 20697 17170549 ~ 17175714 (-)
cdc16 cdc16,LOC107673708,LOC107597489,LOC107748135,LOC107595809,LOC107756764,LOC107695467 coding downstream 25997 17161943 ~ 17170414 (-)
upf3a upf3a,LOC107673688,LOC107756766,LOC107597564,LOC107748176,LOC107695475 coding downstream 34874 17151898 ~ 17161537 (-)
p2ry8 p2ry8,LOC107748136,LOC107597492,LOC107673689,LOC107756734,LOC107695481,LOC107595819 coding downstream 45332 17144856 ~ 17151079 (-)
appb appb,LOC107597486,LOC107748127,LOC107595805,LOC107756757,LOC107695460,LOC108426075 coding upstream 100854 17299245 ~ 17315818 (-)
zp2l1 NA coding upstream 361137 17559528 ~ 17574374 (-)
dnajc28 dnajc28,LOC107748188,LOC107673653,LOC107597584,LOC107756751,LOC107656783,LOC107569146 coding upstream 451584 17649975 ~ 17652121 (-)
ralba ralba,ralb,LOC107746258,LOC107597482,LOC107596059 coding upstream 829963 18028354 ~ 18038668 (-)
hspbap1 LOC107722869,LOC107661136,LOC107660643 coding upstream 998735 18197126 ~ 18205461 (-)
G71035 NA non-coding downstream 277097 16917224 ~ 16919314 (-)
G70981 nxpe3,LOC107597504,LOC107748146,LOC107673677,LOC107695470,LOC107756776,LOC107595812 non-coding downstream 328889 16866492 ~ 16867522 (-)
G71006 NA non-coding downstream 329989 16866178 ~ 16866422 (-)
G71005 NA non-coding downstream 330822 16865278 ~ 16865589 (-)
G70991 NA non-coding downstream 366752 16827058 ~ 16829659 (-)
G71117 NA non-coding upstream 14485 17212876 ~ 17297150 (-)
G71131 NA non-coding upstream 140729 17339120 ~ 17339530 (-)
G71134 NA non-coding upstream 142154 17340545 ~ 17340915 (-)
LOC122352115 NA non-coding upstream 145325 17343716 ~ 17351712 (-)
G71149 NA non-coding upstream 393573 17591964 ~ 17592183 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 306864 16886753 ~ 16889547 (-)
G70986 pou2f1b,LOC107748141 other downstream 372636 16817140 ~ 16823775 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other downstream 450189 16720804 ~ 16746222 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other downstream 1424547 15771421 ~ 15771864 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other downstream 1796974 15389218 ~ 15399437 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other upstream 37481 17235872 ~ 17255491 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other upstream 165796 17364187 ~ 17521560 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other upstream 1052845 18251236 ~ 18366267 (-)
LOC122352185 NA other upstream 1371364 18569755 ~ 18569882 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 2521551 19719942 ~ 19731794 (-)

Expression



Co-expression Network