cdc16 (cdc16,LOC107673708,LOC107597489,LOC107748135,LOC107595809,LOC107756764,LOC107695467)


Basic Information

Item Value
gene id cdc16
gene name cdc16,LOC107673708,LOC107597489,LOC107748135,LOC107595809,LOC107756764,LOC107695467
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17161943 ~ 17170414 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248282.1
TATGAttgtgtatgactttcttctgtggaacatgaCATTTTAGGCTGTCATCTACCTGATATTCTCAATTCTAAAGAAAGTATcaggaacaacatgagggtgagtaaacgatgacagaattgtttattttgggtgaactattcctttaatggcGGAAAGAAACTTGCAATGCAATTTTACTGTTTGCCACAAGAGAGCGGCAATGTGTTTGTAATCCAAACAGGCTTCACGTTCACGTTTAAGagcttgtgtatttatgtattgctgcatttttattatgtgtgtttatatgtatgttataATATTCTAAGTgtgtaaagaaatattttcattgcgatttgcatttttgttgcaCTTTTCGTTGTTACTTCCAAtccatatacaaataataataaaaaaaaaaatgcggaACTTTGCAAAATCCGCGTTTCTGTACGGGCTGTTATCAATGTAACACACGTTTTATGCTAACCGCGGGCTTCAATCTACCTACAGAGGAGCTGTCTTACAAAACTCATTTTCAATCTATTGCATTTGACAAGGATGACagttttttgtatttgacaAACAGTACAATCACCATGAATCTTGACAGGCTTCGTAAAAGAGTGAGACACTACATTGATCAGCAACAGTATCAAAGTGCTCTGTTCTGGGCTGACAAAGTAGCATCCTTATCACATGAGGATCCTCAAGACATTTATTGGTTAGCACAGTGCCTTTATTTGACAGCACAGTATCACAGAGCCTCTCATGCGCTCAGATCTCGCAAACTTGACAAGttgtaTGGAGCCTGTCAGTATCTAGCTGCAAGATGTCATTATGCTGCCAAAGAATATCAACAAGCTCTAGACATCCTGGACATGGAGGAAGCAgccagtaaaaaaatattggagAAGAATGTAAAAGAGGATAATGGCTCAAGGGAAACCGTGAAGGAATGGGAAATGTCTCCTGCCTCAATCAATAGTTCCATCTGTCTCCTGCGGGGGAAGATCTATGATGCCATGGACAACAGACCCCTAGCTACGTCTAGCTACAAAGAGGCCTTGAAACTGGATGTCTACTGCTTTGAAGCTTTTGACCTTTTGACGTCTCATCACATGCTGACCGCCCAAGAGGAGAAAGATTTCTTGGATTCTCTACCCTTAAGTCAACAATGTACAGAAGAGGAAGTGGAATTGTTGCGCtttctgtttgaaaataaattaaagaagTATAACAAACCCAGCGAGATGGTCGTGCCAGAAATAGTCAACGGTCTCCAGGACAACTTGGATGTTGTTGTCTCCCTCGCAGAGCGACATTATTACAACTGTGACTTTAAAATGTGCTACTCTCTTACATCAATggtAATGGTGAAAGACCCATTTCATGCAAACTGTTTACCAGTGCACATAGGAACCCTTGTTGAGCTAAGCAAAGCAAACGAGTTGTTTTACCTGTCTCATAAGCTGGTAGATTTGTATCCCAGCAATCCAGTTTCATGGTTTGCTGTTGGTTGTTACTACCTCATGGTTGGGcataaaaatgaacatgcaAGGCGGTATCTGAGTAAAGCAACCACGCTGGAGCGCACGTACGGACCAGCATGGATAGCATATGGTCACTCGTTCGCTGTGGAGAGCGAACACGATCAGGCCATGGCTGCATACTTCACTGCTGCCCAGCTCATGAAGGGATGTCACCTGCCCATGCTGTACATCGGTTTGGAGTATGGACTCACTAACAACCCCAAGCTGGCAGAACGTTTCTTTAGCCAGGCCCTCAGCATTGCTCCGGAGGACCCCTTTGTCATACACGAGGTAGCTGTGGTCGCCTTCCAAAATGGAGATTATAAAACAGCCGAGAAGTTGTTTCTAGATGCTATGGATAAGATCAAGGCCATTGGGAATGAGgtgaCCGTAGACAAGTGGGAGCCGCTCTTAAATAATTTGGGCCATGTGTGTCGAAAATTGAAGAAATATGAACAGGCTCTCGAATACCACAGGCAAGCGTTGGTTCTCATCCCACAGAATGCCTCCACTTACTCAGCCATCGGTTATGTGCACAGCCTCATGGGAGATTTCGAGAGTGCCATTGACTACTTTCACACTGCACTTGGCCTTAAACGAGATGACACATTTTCCGTAACCATGCTGGGTCACTGCATTGAGATGTATATCAGCGACTCGGATGCTTACATTGGAACCGATATTAAAGACAAAGTGAGAAAGACGCTCAGCACGCCTGCACTGATGAAGATGCTCAACACTTCTGCCGACGGCAATGAGAGCAGGGCACAGCCCGTAGAAGAGGTGAACGTGTGCCTGGAAACGCAGTCTTTCACCGCTGACAAACAAACCGACGCTTTCCAGCGCTTCCTCTTAGAATGCGACATGCATGAGAGCGATATGATGCTGGAGACGTCCATGTCTGACACCAGCACGTGATCGAGACCTATAAATGGGTCAAAGAGGAACTTTGAGCATGAGTTGATGATAGAATGTGACTCTAAAGAggacacaaacaaaacacacgcCCTCCCTCCATCCGCCAGCCCTGCCGTGTCCTCCGTGTTGGACccctgtggattttttttttactatgaataaatgtaaagaagTGAATGCAAAAGGGTCGGATGATCGAATCAATAAACCCTGCATCCatatttttacacagatttgtgTATTCTCATTGGTGCTCTATTAAAACGTCTGTTTTGTGGATGAGGCTGaaagaaa

Function

symbol description
cdc16 Acts upstream of or within mitotic cell cycle. Predicted to be part of anaphase-promoting complex. Predicted to be active in cytoplasm. Is expressed in digestive system; head; heart; and immature eye. Orthologous to human CDC16 (cell division cycle 16).

NR:

description
cell division cycle protein 16 homolog isoform X2

GO:

id name namespace
GO:0051301 cell division biological_process
GO:0000278 mitotic cell cycle biological_process

KEGG:

id description
K03353 APC6, CDC16; anaphase-promoting complex subunit 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248282.1 True 2726 mRNA 0.43 18 17161943 17170414

Neighbor

gene id symbol gene type direction distance location
upf3a upf3a,LOC107673688,LOC107756766,LOC107597564,LOC107748176,LOC107695475 coding downstream 406 17151898 ~ 17161537 (-)
p2ry8 p2ry8,LOC107748136,LOC107597492,LOC107673689,LOC107756734,LOC107695481,LOC107595819 coding downstream 10864 17144856 ~ 17151079 (-)
asmtl asmtl,LOC107597490,LOC107673687 coding downstream 18586 17137141 ~ 17143357 (-)
slc25a6 slc25a6,LOC107597494,LOC108426068,LOC107595824,LOC107695486,LOC107756767,LOC108266970 coding downstream 25148 17132470 ~ 17136795 (-)
LOC122352140 NA coding downstream 30516 17117017 ~ 17131427 (-)
dcun1d2a dcun1d2a,LOC107597495,LOC107673709,LOC108426072,LOC103045446,LOC107756765 coding upstream 135 17170549 ~ 17175714 (-)
mettl21cb zgc:172067,LOC107673723,LOC107748129,LOC107597488 coding upstream 18332 17188746 ~ 17192142 (-)
si:ch211-160b11.4 NA coding upstream 25997 17196411 ~ 17198391 (-)
appb appb,LOC107597486,LOC107748127,LOC107595805,LOC107756757,LOC107695460,LOC108426075 coding upstream 128831 17299245 ~ 17315818 (-)
zp2l1 NA coding upstream 389114 17559528 ~ 17574374 (-)
G71035 NA non-coding downstream 242629 16917224 ~ 16919314 (-)
G70981 nxpe3,LOC107597504,LOC107748146,LOC107673677,LOC107695470,LOC107756776,LOC107595812 non-coding downstream 294421 16866492 ~ 16867522 (-)
G71006 NA non-coding downstream 295521 16866178 ~ 16866422 (-)
G71005 NA non-coding downstream 296354 16865278 ~ 16865589 (-)
G70991 NA non-coding downstream 332284 16827058 ~ 16829659 (-)
G71117 NA non-coding upstream 42462 17212876 ~ 17297150 (-)
G71131 NA non-coding upstream 168706 17339120 ~ 17339530 (-)
G71134 NA non-coding upstream 170131 17340545 ~ 17340915 (-)
LOC122352115 NA non-coding upstream 173302 17343716 ~ 17351712 (-)
G71149 NA non-coding upstream 421550 17591964 ~ 17592183 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 272396 16886753 ~ 16889547 (-)
G70986 pou2f1b,LOC107748141 other downstream 338168 16817140 ~ 16823775 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other downstream 415721 16720804 ~ 16746222 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other downstream 1390079 15771421 ~ 15771864 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other downstream 1762506 15389218 ~ 15399437 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other upstream 65458 17235872 ~ 17255491 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other upstream 193773 17364187 ~ 17521560 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other upstream 1080822 18251236 ~ 18366267 (-)
LOC122352185 NA other upstream 1399341 18569755 ~ 18569882 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 2549528 19719942 ~ 19731794 (-)

Expression


Co-expression Network