LOC122351346 (si:dkey-4e7.3,LOC107688734,LOC107602908,LOC107716768)


Basic Information

Item Value
gene id LOC122351346
gene name si:dkey-4e7.3,LOC107688734,LOC107602908,LOC107716768
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 7149931 ~ 7153764 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248365.1
ACGCCCAGCGCCCAGCCACGCCCAGCGTCGTCAGACccaagtgtttcttttttactgttttaagtgAAATCAcgcaacataaaaataacagcaacaccAAAAACTGCTTGACCCGAGCGTTTCTTAGAAGACAACTAGATAcgAGCTCTTGACTGCTTCACCAGCTTTCAGGAAACTAACAGGTTCACTAACCCACAGGGGCCAGCATGAAGAAACTTCTCGTGGACGTGGACTGTGGTGTGGATGATGCTCAGGCTATCATGATGGCTTTGGCAGCGCCTGGTGTGAAGATCCTGGGCATCACCTGCGTTCAGGGAAACACCATAGTAGACAATGTCTGCAAGAACGTCCTGCGTGTCTTGAAAGTGTGTAAGCGTCTGGAGATCCCTGTATTCCGTGGAGCGCCCAAAGCGCTCTTGGAACAGATCATCAGTGCTGGAGACTATTATGGCAAAGACGGACTCGGAGACGTCCCGGACCCCGACGCTCCTGGTTTGGATCTGCTCCAGAAAGAGGGCGCCGTGTCAGCCATGATCCGAATAGTCAACGAGAACCCTGGAGAGGTGTCTTTAGTGGCCACTGCTCCGCTGACAAATGTGGCTTTGGCTGTGAAACTTGACCCCACCTTTCCACAGAAACTCAAAGGCCTTTACATTATGGGTGGAAATACAGACTCTCGTGGGAACATCACTGTATGTGGAGAGTACAACTTCGCAGCTGATCCTGAAGCAGCATATATTGTTCTGAATGAATTCACTTGCCCAGTTTACATTGCCACCTGGGAGTTCACCTTACGGAGTAAACTACCCTGGgagttCTGTGACGGCTGGCTGGCTCAGGACACGGATAAAGCTCGGTTTATGAAGCTGATCTTTAAGCACAGCATGGAGTCCACCTACAGCGAGAGGATCGAGAAGGAGCTCGTGGACGGGCAGGGATTCATCTCCTGCGATTCTTACGCCATGGCAGCAGCCGTAGACGAGGCGTATATCATTGAAACCGACCTCAAACCCGTCACCGTCGAGCTGGCGGGGAACTACTGCCGGGGAATGATGGTTGTAGATCACCTCGACATCCTGAAGAAGACTCACAAAGCCCACATCCTGAAGAAGGTGGACTTGGAGAGATTTAAAGAGCTCATGATGAATGCTTTGAAATAAACCGTCATCCGTAGCCGTGTCTGGAA
>XM_043248366.1
ACGCCCAGCGCCCAGCCACGCCCAGCGTCGTCAGACccaagtgtttcttttttactgttttaagtgAAATCAcgcaacataaaaataacagcaacaccAAAAACTGCTTGACCCGAGCGTTTCTTAGAAGACAACTAGATAcgGGGCCAGCATGAAGAAACTTCTCGTGGACGTGGACTGTGGTGTGGATGATGCTCAGGCTATCATGATGGCTTTGGCAGCGCCTGGTGTGAAGATCCTGGGCATCACCTGCGTTCAGGGAAACACCATAGTAGACAATGTCTGCAAGAACGTCCTGCGTGTCTTGAAAGTGTGTAAGCGTCTGGAGATCCCTGTATTCCGTGGAGCGCCCAAAGCGCTCTTGGAACAGATCATCAGTGCTGGAGACTATTATGGCAAAGACGGACTCGGAGACGTCCCGGACCCCGACGCTCCTGGTTTGGATCTGCTCCAGAAAGAGGGCGCCGTGTCAGCCATGATCCGAATAGTCAACGAGAACCCTGGAGAGGTGTCTTTAGTGGCCACTGCTCCGCTGACAAATGTGGCTTTGGCTGTGAAACTTGACCCCACCTTTCCACAGAAACTCAAAGGCCTTTACATTATGGGTGGAAATACAGACTCTCGTGGGAACATCACTGTATGTGGAGAGTACAACTTCGCAGCTGATCCTGAAGCAGCATATATTGTTCTGAATGAATTCACTTGCCCAGTTTACATTGCCACCTGGGAGTTCACCTTACGGAGTAAACTACCCTGGgagttCTGTGACGGCTGGCTGGCTCAGGACACGGATAAAGCTCGGTTTATGAAGCTGATCTTTAAGCACAGCATGGAGTCCACCTACAGCGAGAGGATCGAGAAGGAGCTCGTGGACGGGCAGGGATTCATCTCCTGCGATTCTTACGCCATGGCAGCAGCCGTAGACGAGGCGTATATCATTGAAACCGACCTCAAACCCGTCACCGTCGAGCTGGCGGGGAACTACTGCCGGGGAATGATGGTTGTAGATCACCTCGACATCCTGAAGAAGACTCACAAAGCCCACATCCTGAAGAAGGTGGACTTGGAGAGATTTAAAGAGCTCATGATGAATGCTTTGAAATAAACCGTCATCCGTAGCCGTGTCTGGAA
>XM_043248367.1
ACGCCCAGCGCCCAGCCACGCCCAGCGTCGTCAGACccaagtgtttcttttttactgttttaagtgAAATCAcgcaacataaaaataacagcaacaccAAAAACTGCTTGACCCGAGCGTTTCTTAGAAGACAACTAGATAcgAGCTCTTGACTGCTTCACCAGCTTTCAGGAAACTAACAGGTTCACTAACCCACAGGTGGGAATTACATTCATCTGGCTGACATATTTACCCGAGGTGTCTAAAGGGGCCAGCATGAAGAAACTTCTCGTGGACGTGGACTGTGGTGTGGATGATGCTCAGGCTATCATGATGGCTTTGGCAGCGCCTGGTGTGAAGATCCTGGGCATCACCTGCGTTCAGGGAAACACCATAGTAGACAATGTCTGCAAGAACGTCCTGCGTGTCTTGAAAGTGTGTAAGCGTCTGGAGATCCCTGTATTCCGTGGAGCGCCCAAAGCGCTCTTGGAACAGATCATCAGTGCTGGAGACTATTATGGCAAAGACGGACTCGGAGACGTCCCGGACCCCGACGCTCCTGGTTTGGATCTGCTCCAGAAAGAGGGCGCCGTGTCAGCCATGATCCGAATAGTCAACGAGAACCCTGGAGAGGTGTCTTTAGTGGCCACTGCTCCGCTGACAAATGTGGCTTTGGCTGTGAAACTTGACCCCACCTTTCCACAGAAACTCAAAGGCCTTTACATTATGGGTGGAAATACAGACTCTCGTGGGAACATCACTGTATGTGGAGAGTACAACTTCGCAGCTGATCCTGAAGCAGCATATATTGTTCTGAATGAATTCACTTGCCCAGTTTACATTGCCACCTGGGAGTTCACCTTACGGAGTAAACTACCCTGGgagttCTGTGACGGCTGGCTGGCTCAGGACACGGATAAAGCTCGGTTTATGAAGCTGATCTTTAAGCACAGCATGGAGTCCACCTACAGCGAGAGGATCGAGAAGGAGCTCGTGGACGGGCAGGGATTCATCTCCTGCGATTCTTACGCCATGGCAGCAGCCGTAGACGAGGCGTATATCATTGAAACCGACCTCAAACCCGTCACCGTCGAGCTGGCGGGGAACTACTGCCGGGGAATGATGGTTGTAGATCACCTCGACATCCTGAAGAAGACTCACAAAGCCCACATCCTGAAGAAGGTGGACTTGGAGAGATTTAAAGAGCTCATGATGAATGCTTTGAAATAAACCGTCATCCGTAGCCGTGTCTGGAA

Function

NR:

description
PREDICTED: inosine-uridine preferring nucleoside hydrolase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248365.1 False 1186 mRNA 0.51 7 7149931 7153764
XM_043248366.1 False 1131 mRNA 0.51 6 7149931 7153764
XM_043248367.1 True 1235 mRNA 0.51 7 7149931 7153764

Neighbor

gene id symbol gene type direction distance location
inpp4aa inpp4a,inpp4aa,LOC107676472,LOC107688733,LOC107602877,LOC107721597 coding upstream 7283 7117546 ~ 7142648 (+)
mfsd9 LOC107716769,LOC107688732,LOC107602885,LOC107551077,LOC107721579,LOC107676555 coding upstream 43569 7100429 ~ 7106362 (+)
fhl2a fhl2a,fhl2,LOC107716797,LOC107676452,LOC107688730,LOC107721574,LOC108266723 coding upstream 185885 6956521 ~ 6964046 (+)
uxs1 uxs1,LOC107688726,LOC107676432,LOC107551074 coding upstream 269903 6842578 ~ 6880028 (+)
st6gal2a st6gal2a,LOC107721598,LOC107688722,LOC107676409,LOC107716800,LOC107602911,LOC107551073 coding upstream 336909 6763869 ~ 6813022 (+)
ihha ihha,LOC107716791,LOC107688738,LOC107721594,LOC107668405,LOC107551082,LOC107602904 coding downstream 87572 7241336 ~ 7247598 (+)
tmem198a tmem198a,LOC107688741,LOC107716788,LOC107602903,LOC107551083,LOC107721592,LOC108423970,LOC107668403 coding downstream 117598 7271362 ~ 7291542 (+)
ptprna ptprna,LOC107551086,LOC107688743,LOC107716786,LOC107602900,LOC107668387,LOC107721560 coding downstream 151076 7304840 ~ 7328592 (+)
mnx2a mnx2a,LOC107551068,LOC107688780,LOC107602884,LOC107716783,LOC107668369,LOC107721589 coding downstream 210200 7363964 ~ 7366993 (+)
cfap65 cfap65,LOC107688747,LOC107668360,LOC107716758,LOC107735777 coding downstream 213900 7367664 ~ 7380524 (+)
G68309 NA non-coding upstream 154075 6991833 ~ 6995856 (+)
G68304 si:dkeyp-118h3.5,gpr45,LOC107602888,LOC107688775,LOC107716773,LOC107676540,LOC107721584,LOC107551066 non-coding upstream 175230 6963155 ~ 6974701 (+)
G68296 nck2a,nck2,LOC107688727,LOC107602910,LOC105022090,LOC107716798 non-coding upstream 206610 6907738 ~ 6943321 (+)
G68254 NA non-coding upstream 441738 6707841 ~ 6708193 (+)
G68252 NA non-coding upstream 455020 6694678 ~ 6694911 (+)
G68405 NA non-coding downstream 45505 7199269 ~ 7199817 (+)
G68401 NA non-coding downstream 102916 7256680 ~ 7259394 (+)
G68424 NA non-coding downstream 108777 7262541 ~ 7263713 (+)
G68397 desma,LOC107688742,LOC107602901,LOC107716787 non-coding downstream 127003 7280767 ~ 7301495 (+)
G68435 NA non-coding downstream 181727 7335491 ~ 7336359 (+)
LOC122351907 LOC107670338,LOC107721263 other upstream 1176808 5962884 ~ 5973123 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other upstream 1264178 5883927 ~ 5885753 (+)
trnam-cau_112 NA other upstream 1692402 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 1692668 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 1693088 5456772 ~ 5456843 (+)
si:ch211-167j6.3 NA other downstream 1187531 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 1277347 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 1306980 8460744 ~ 8506143 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other downstream 1709623 8863387 ~ 8866305 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other downstream 1713333 8867097 ~ 8871633 (+)

Expression


Co-expression Network