creg2 (creg2,LOC107716793,LOC107721575,LOC107602906)


Basic Information

Item Value
gene id creg2
gene name creg2,LOC107716793,LOC107721575,LOC107602906
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 7196115 ~ 7200021 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248369.1
CGAGACAAAAAATCCTTTTATTatgcgttttattttacatttcgcTGACAAGTTTACCTCAGTCATAAGCCGACTATTGTAAGATCGTGTTAGCCCAGTGTTTTGGTGGAAACGATGTACGGAGGGATGGAGGTCACCCGCCGCGGTTCTCGGGCGGTCCAGCAGAGGTCGCTGTTTCAGGCCGCTCTCGCGTAACGCCACAGCCGCAGATGATAAACAAACATGCCGCTCGAGTGAAGGTGAACGCGATGCTGCTGCTTCACCTGGTCTCCGTACTGACGGCGCTGGCGCGCGTCGGCGAGAGCTACACGCTCCGGAGCGCGGTGTCGTGGGCCGCCGCCGGGGACGCGGCGGAGGAAGAGCTGGACACGCACTCCGACGAGGCGCCCGCCGTGCTCGTCGACAACATCGGCATCTGGAAACCAGCCTACCCGTCCTCCGTGTACCGGGACGCCTCAGAGAAGAAACCCGAGCAGGTCTCGAAAAGCGAGGACGTGTCCTCCGCGTCCCGCGTGTTCTCGTACCGGATGGAGGAGGTGAAGGCGCCGTCCAGCGTCTCCGCGCCCCCGCCGCACGAGGACACGGCGAGAGTCGCGCGCTACATGGCGCACTACAGCGACTGGGGTCACCTGGCGACCATCTCCACGCAGGAGCAGATCAAGGGACTTCCTTTTGGAAACATTTTCTCTGTAAGCGACGGTCCAGCAGACAACAGCACTGGGGTTCCTTATTTTTATGTGACGCCGATGGACAACACTGTAACAGACCTTCGCAGCTTCCCTTTTGCCTCCTTAACATTTTCTGAGGCAGAGGGAGATTTCTGCAGGAAGCAGGTTTATGACCCTGAGGACCCGAGGTGTGCCAGACTCACTTTGACTGGTAAAATGGTGGAGGTGGGACCAGAAGAGCTTGACTTCGCCAAAGAGGCCATGTTCTCCAGGCATCCTGTCATGAAGAAGTGGCCCCCTGGACATAACTGGTTTTTCATGAAGCTGGTTCTGCAGCAGGTTTGGCTTCAGGACTGGGTTGGAGGAGTCTCTGTCATTCAGCTTGAAGAGTATTTCAAAGCGTCCCCTTTCTGAGAGAAAAGATCAACGAAAGAGCGGTATTAGCAGAACCCACCTGATTGTGTACAGAAGGTGGCCATGCTTTTTGTTACAAACTACTTTTAACTGGTGTTTTTTCTGGCCACGATGCCGGTTCAGTGCCTCTGAACATATTGCTGAGGATTTATTGAATGTATAAATGACGTTAAAGGAAGCATAGCATTATCTATAAAACAATTTCACGGCCGCTTAATGTTGGAGATCTTTATTACGTGTACACCGCACTGAAAGGAAAGCCATTCgttcattataaataaacaaatctctCATGCTAAATAAATCTACCACAGGCCTTCATACTTGAGTACACAGAGATAGGGTATATACTGAATAGTTGTTGAGTTCTCGGCCGTTTTCTCTGAAACGTCACTGTATTGAAGGTTTGACAATTCATTAATagctgaaatgtgtgtgtgtttgtgcgcaaAAGATTTTTTCATTGGTATTTATGGCATCTAATGCTCTTCAAGTTCAGTTTCAGGTCAGCATTTATACTTCTCAAGGACAGCGACTCACGGTACAGTACATGACCTCATGTGTTACACTACCTTTACGCAATTACAATGTAATTGACACCTTAATGAAATATCTCAAATATCTGTTTGTGCCTTGCGTTACCTCTTTACAATGATATACATGTGCTgcacaattacaataaaagcataaaaaataca

Function

symbol description
creg2 Predicted to be located in extracellular region. Predicted to be active in extracellular space. Orthologous to human CREG2 (cellular repressor of E1A stimulated genes 2).

NR:

description
protein CREG2

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0010181 FMN binding molecular_function

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248369.1 True 1780 mRNA 0.49 4 7196115 7200021

Neighbor

gene id symbol gene type direction distance location
mgat4a mgat4a,LOC107721595 coding downstream 1604 7154979 ~ 7194511 (-)
slc9a2 LOC107688777,LOC107602878,LOC107716761 coding downstream 78638 7106559 ~ 7117477 (-)
tmem182a tmem182,tmem182a,LOC107721587,LOC107551067,LOC107602887,LOC107716770,LOC107676521 coding downstream 98323 7093903 ~ 7097792 (-)
pou3f3a pou3f3a,pou3f3,LOC107716796,LOC107688731,LOC107602909,LOC107721578,LOC107676544 coding downstream 205347 6987723 ~ 6990768 (-)
gpr45 si:dkeyp-118h3.5,gpr45,LOC107602888,LOC107688775,LOC107716773,LOC107676540,LOC107721584,LOC107551066 coding downstream 221207 6969817 ~ 6974908 (-)
cracdla kiaa1211l,LOC107602905,LOC107688737,LOC107602875 coding upstream 249 7200270 ~ 7214956 (-)
mitd1 mitd1,LOC107688779,LOC107668392,LOC107721562,LOC107721614 coding upstream 14992 7215013 ~ 7218008 (-)
slc23a3 LOC107688765,LOC107716759,LOC107602874,LOC107721561 coding upstream 47998 7248019 ~ 7256613 (-)
LOC122352006 bin1,LOC107688739,LOC107716789,LOC107721593,LOC107668401,LOC563561 coding upstream 59173 7259194 ~ 7268300 (-)
desma desma,LOC107688742,LOC107602901,LOC107716787,LOC107721591,LOC107668394 coding upstream 95557 7295578 ~ 7301529 (-)
LOC122352164 NA non-coding downstream 160754 6982678 ~ 7035361 (-)
LOC122351994 NA non-coding downstream 300718 6892652 ~ 6895397 (-)
G68357 NA non-coding downstream 313139 6882585 ~ 6882976 (-)
G68328 st6gal2a,LOC107676409,LOC107721598,LOC107688722,LOC107551073,LOC107602911,LOC107716800 non-coding downstream 383100 6809848 ~ 6813015 (-)
G68333 LOC107721598,LOC107716800,LOC107688722,LOC107579700 non-coding downstream 401740 6793402 ~ 6794375 (-)
G68473 NA non-coding upstream 127808 7327829 ~ 7341494 (-)
G68489 NA non-coding upstream 181269 7381290 ~ 7381508 (-)
G68555 nrp2b,LOC107688766,LOC107688751,LOC107752901 non-coding upstream 615228 7815249 ~ 7818832 (-)
G68554 nrp2b,LOC107596550,LOC107716756,LOC107688751,LOC107593002,LOC107752901 non-coding upstream 619987 7820008 ~ 7821889 (-)
LOC122352023 NA non-coding upstream 1270842 8470863 ~ 8474578 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other downstream 42161 7070985 ~ 7153954 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other downstream 935046 6246900 ~ 6261069 (-)
LOC122351979 NA other downstream 1096203 6099071 ~ 6099912 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other downstream 1152190 6043275 ~ 6043925 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other downstream 1264979 5912855 ~ 5931136 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other upstream 814428 8014449 ~ 8024672 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other upstream 876447 8076468 ~ 8094847 (-)
LOC122351483 LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476 other upstream 2708167 9908188 ~ 9910178 (-)
trim13 trim13,LOC107720128,LOC107555217,LOC107663864,LOC107706093,LOC107600394,LOC107655513 other upstream 3233486 10433507 ~ 10443619 (-)
fdx1 fdx1,LOC107663820,LOC107706088,LOC107720152,LOC107655504,LOC107600437,LOC107555213,LOC107655505 other upstream 3315251 10515272 ~ 10519457 (-)

Expression


Co-expression Network