tmem182a (tmem182,tmem182a,LOC107721587,LOC107551067,LOC107602887,LOC107716770,LOC107676521)


Basic Information

Item Value
gene id tmem182a
gene name tmem182,tmem182a,LOC107721587,LOC107551067,LOC107602887,LOC107716770,LOC107676521
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 7093903 ~ 7097792 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248370.1
GAAGAggacactgacacacacacacacacacagacagacaccaGAGCTCGGAAGAGTACTAGTACGGCCACTTGTGATCACACGCTATACACCTTGCTGAGCACAACTGGACTAAGAGACTATTTTTCACACAGATTGTGAGGAGTTACGTCATTTCAGTGCCTGTTTCATGTGGGAAGGAGGAGAGACTGTTTAACGAGAAGTAAACAGCTGAGAGAGTTGCAGTCTAAGATTGTCATCATGAAGTTGCATGTGGCACTATTTTTCGCTGGGCTCTTTGGTGCCTTGGCAACTCTGTtcattctcttttcttttggcACGGACTACTGGCTCTTGGCGACAGAGACCTGCAATTCACATTCAAATGGTCCGGTTACTAAGCAGCAAGGTGATGTCGTGGTCAACCAGGGTCAGGACCAATTTAGCGAAGACCAGAACATTACCTTTCATCACGAGGGCCTCTTTTGGCGCTGTAGCTTTAATGAAATCatgaatgatgatgatgatctcTGGAAGTTTTGGTTCGAAAATCAGCCACACGCGAGGGAATGCAAACCTGCGTATCTTCTCCCCTTTCCTTTCCCTGACCAGATCTACAACACTACCAGCTATCAGACTGCCATAAtCTACAGAGGTTTCTGGAGCGTCTCTATGTTGCTGGGAGTGGCTGCTGTGGTGGCCGGCggtttcattattatttgtgcGGCTCCGTTTGCCAGTCATCGCCTTTATAAAGCAGGAGGTGGACTCTATCTCATTTCTGGTCTCTTCCTTCTCATTGTCACTGTGATGTATGTTTTCTGGCTAGATGTTTTGGATGTAATAAGCTCATATAAGGACTATCAGAAGTTGAATAAGTGCCCTGATTTTGAGCTCAATGTGACGTATGGTCTCTCTTTCATGTTTGCTCCTGTGGGCGTGTTCTTCTGTATTCTGTCTGGTCTTCTTTTCCTAGTGATTGGCCGTACAGTCCAGCATCATTATAACTAAACCTCATGAAAGGTTTCAAAACAGAAGAATCAGACTGCATgctcaaaatgcattaaagggatggttcaccccCCCCCCAAACAGTTTTTTTGAATGTCAACTCATTGCTTACAAACATTATTCATGTTCTTTATATCATTATCGGgtgaagtatccctttaattaTCTGCATTTTATCTCTGAGTATGCGCTTACTTTATGACAAGGTGGGGTACAGCTGTTGTTGATTTTGAAATTTGCAAATATGGCTTCAGTATTTGGCCATGACGTGTGCTGTGAGCGGTACTGCAAACACTGATCATGGATGGTTTGGGATCACTTCCTTTAAGCGTGAGTGATTGTGCGAGTATAGTATTGCACAAAgctttaaattatgtttaatatatctATTAGGAACctctgcatttttatatttcaaaagcgTACCTCTCCATTATAAATGTACACCTCCTTTTGAGTTTGTTCCACCTTACATTTCGATTATTAATTTATTGGTGATTTCTAGAGTGTTTTGCCCCTCAGGCTTTGAAATAATCTAGACCGACTTTGTAGCGTTGTAGAAATACCCAGCTGACCTGGAAGCTTTGTTTTACACACCacagcacatatatatatttgctttgtaaataatattatatattgctaTCAAGTACAACTGATATgtactgtaatatttcaaaaggttaattaaaactttcatttaaaaaaaaaaaaa

Function

symbol description
tmem182a Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM182 (transmembrane protein 182).
tmem182 Predicted to be integral component of membrane.

NR:

description
transmembrane protein 182-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248370.1 True 1705 mRNA 0.41 5 7093903 7097792

Neighbor

gene id symbol gene type direction distance location
pou3f3a pou3f3a,pou3f3,LOC107716796,LOC107688731,LOC107602909,LOC107721578,LOC107676544 coding downstream 103135 6987723 ~ 6990768 (-)
gpr45 si:dkeyp-118h3.5,gpr45,LOC107602888,LOC107688775,LOC107716773,LOC107676540,LOC107721584,LOC107551066 coding downstream 118995 6969817 ~ 6974908 (-)
c9h2orf49 LOC107716774,LOC107688774,LOC107721580,LOC107676461,LOC107551065 coding downstream 124696 6965229 ~ 6969207 (-)
nck2a nck2a,LOC107602910,LOC107688727,LOC107721610,LOC107676443,LOC107551075,LOC107716798 coding downstream 150461 6896477 ~ 6943442 (-)
ecrg4a ecrg4a,LOC107602890,LOC107688728,LOC107716776,LOC107721563 coding downstream 205529 6883488 ~ 6888374 (-)
slc9a2 LOC107688777,LOC107602878,LOC107716761 coding upstream 8767 7106559 ~ 7117477 (-)
mgat4a mgat4a,LOC107721595 coding upstream 57187 7154979 ~ 7194511 (-)
creg2 creg2,LOC107716793,LOC107721575,LOC107602906 coding upstream 98323 7196115 ~ 7200021 (-)
cracdla kiaa1211l,LOC107602905,LOC107688737,LOC107602875 coding upstream 102478 7200270 ~ 7214956 (-)
mitd1 mitd1,LOC107688779,LOC107668392,LOC107721562,LOC107721614 coding upstream 117221 7215013 ~ 7218008 (-)
LOC122352164 NA non-coding downstream 58542 6982678 ~ 7035361 (-)
LOC122351994 NA non-coding downstream 198506 6892652 ~ 6895397 (-)
G68357 NA non-coding downstream 210927 6882585 ~ 6882976 (-)
G68328 st6gal2a,LOC107676409,LOC107721598,LOC107688722,LOC107551073,LOC107602911,LOC107716800 non-coding downstream 280888 6809848 ~ 6813015 (-)
G68333 LOC107721598,LOC107716800,LOC107688722,LOC107579700 non-coding downstream 299528 6793402 ~ 6794375 (-)
G68473 NA non-coding upstream 230037 7327829 ~ 7341494 (-)
G68489 NA non-coding upstream 283498 7381290 ~ 7381508 (-)
G68555 nrp2b,LOC107688766,LOC107688751,LOC107752901 non-coding upstream 717457 7815249 ~ 7818832 (-)
G68554 nrp2b,LOC107596550,LOC107716756,LOC107688751,LOC107593002,LOC107752901 non-coding upstream 722216 7820008 ~ 7821889 (-)
LOC122352023 NA non-coding upstream 1373071 8470863 ~ 8474578 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other downstream 832834 6246900 ~ 6261069 (-)
LOC122351979 NA other downstream 993991 6099071 ~ 6099912 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other downstream 1049978 6043275 ~ 6043925 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other downstream 1162767 5912855 ~ 5931136 (-)
LOC122351915 LOC108191338,LOC101883771,LOC101885620 other downstream 1694023 5396865 ~ 5399880 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other upstream 916657 8014449 ~ 8024672 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other upstream 978676 8076468 ~ 8094847 (-)
LOC122351483 LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476 other upstream 2810396 9908188 ~ 9910178 (-)
trim13 trim13,LOC107720128,LOC107555217,LOC107663864,LOC107706093,LOC107600394,LOC107655513 other upstream 3335715 10433507 ~ 10443619 (-)
fdx1 fdx1,LOC107663820,LOC107706088,LOC107720152,LOC107655504,LOC107600437,LOC107555213,LOC107655505 other upstream 3417480 10515272 ~ 10519457 (-)

Expression


Co-expression Network