xpo4 (xpo4,LOC107724474,LOC107668883,LOC107569111,LOC107712270,LOC107597380,LOC107658250)


Basic Information

Item Value
gene id xpo4
gene name xpo4,LOC107724474,LOC107668883,LOC107569111,LOC107712270,LOC107597380,LOC107658250
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14521398 ~ 14551453 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248391.1
CCAAAAAGTGCCCGTGAACTCACTGGCCCGAAGGGCTGCTtaatcccacaatgcagtgcatGGCGCGTCACTGAAGAACGACCATGATGGCGGCGGTCGGTGCACCAGAAGTGATTTCACAGCTGGAAAGCGCTGCCAAAGTTTTAATGGCACCGCCGTCCATGGTAAGCACAGAACAGAGGCAGCATGCAGAGCATATATTCCTCTCCTTCAGGAAGTCGAAATCCCCTTTTGCCATCTGCAAACACATCCTTGAGACTAGTAAAGTGGACTATGTGTTGTTCCAGGCCGCCACAGCCATCATGGAGGCAGTGGTTAGAGAATGGATCCTTCtggaaaagaacagcattgagTCCCTCAGAACATTCCTTCTCACCTACGTCTTACAGAGACCCAATCTGCAAAAGTATGTTCGAGAGCAGATCCTGTTAGCGGTAGCAGTAATAGTGAAGAGAGGCTCTCTTGATAAATCTATTAACTGTAAGAGCATCTTCCATGAGGTCAGTCAGCTCATCAGCAGCGGCAATCCCACAGTGCAAACATTGGCCTGCTCCATCCTGACAGCTCTGTTGAGTGAGTTCTCCAGCTCCAATAAGACCAGTAACATTGGCCTCAGTATGGAGTTTCACGGAAGCTGCAAACGCATCTTTCAGgagGACGATCTCAGGCAGATCTTCATGCTCACTATGGAGGTCCTGCAGGAATTCAGTCGGAGAGAGAACCTCAACGCTCAGATGTCCTGTGTTTTCCAGCGCTACCTTGCCCTGGCCAATCAAGTGCTCAGCTGGAACTTCCTTCCACCCAATCTGGGGAGGCACTACATTGCCATGTTTGAAGCGACTCAGAATGTCATGCTCAAGCCAACCGAGTCCTGGAGGGAAACACTTCTAGACCACAGAGTCATGGACCTTTTCTTCACAGTGCACAGGAAGATCAGAGAGGACTCAGACATGGCGCAGGATTCCCTTCAGTGCCTGGCCCAGCTGGCCTCTATGCATGGCCCCATCTTCCCTGATGAGAGCGCTCAGGTGACCTACCTGGCCCACCTGGTAGAGGGATTGCTCAACATGATCAACGGGATTGAGATTGAAGACTCCGAGGCTGTAGGCATCTCCAACATCATCAGTAACCTCATCAGCACATTTCCCCGAAGTGTTCTGACAGCGCTCCCGAACGAGCTCTTCGCCTCTTTCATTAACTGCCTCACATTGCTCACATGCTCGTTTGGTCGCAGCGCCGCCCTGGAGGAGGTGCTGGATAAGGATGACATGGTGTACATGGAGGCATATGATAAGCTGCTGGAATCCTGGCTGACGCTGGTGCAGGAGGATGAGCACTTCCCCCGGGGATGCTTTGTCCAGCCGGCCGTGCAGGTCTTCAACTCCTACATCCAGTGTCACCTCGCAGCTCCTGACGGCACGAGGAATCTGACTGCAAATGGTGTCGCTTCTCATGAAGAGGAAGAAATAAACGAATTACAGGAGGACGACAGAGAGCTGTTCTCAGATCAGCTGGCCAGTATCGGCATGTTGGGCCGCATCGCTGCAGACCACTGTATACCTCTGCTCACAGGTTTGTTGGAGGACCGAGTCACACGGCTTCACGGGCAACTCCAGAGACACCAGCAGCACCTCATGGCTTCTGCAGACCCTGGCACGGTGGACCGGAAAGTTCTAGATGACCTTTATGAAGACATTCATTGGCTCATATTAGTGTCAGGTTACCTCTTGGCTGATGACCCTCAGGGTGAAACACCATTGATACCTTCAGAAGTGATGGAGTATTCTATCAAACACTCAACTGAGGTGGATATCAACACTACACTGCAGCTTCTTGGCTCTCCTGGAGAGAAGGCCACCTCCATCCCAGGATGCAACAGGACAGACTCAGTTATCAGGTTGTTATCTGCAGTGCTAAGAACCTCAGAGGTGGAGTCGCGGGCTACACGAGCGAGTCTGACTGAGCTCCTGAGTCCTCAGATGGGCAAAGACATTGTCTGGTTTCTTCGGCGCTGGGCCAAGACATACCTGTTAGTGGATGAGAAACTCTACGGCCAAATCAGTATGCCTCTCAGCACAGCTTTTGGAGCAGACACGGAGGGAGCGCAGTGGATCGTGGGATATCTGTTGGAGAAAGTGATCAATAATCTGTCGGTGTGGAGCTCTGAGCCAGAGCTGGCTAATGACACTGTGGAGCTGCTGGTGACTCTggtggagaagagagagagGGCAAACATTGTAGTGCAGTGTGAGAACTGGTGGAACTTGGCCAAGCAGTTTGCCAGTCGCAGCCCTCCCTTACATATGCTGTCCAGCACAGTCCAGCGGACTCTGATGAAAGCCCTGGTCCTGGGCGGCTTTGCTCATATGGATTCTGATACCAAACAGCAATACTGGGCAGAGGTACTGCATCCACTCCAGCAGCGCTTTCTCAACCTCATTAACCAGGAGAACTTCGCCCAGATCTGTCAAGAGGAAGCCGTGAAACAGGAGATCGTTGCCACTCTAGAAGCTCTGTGTGGCATCGCAGAAGCAACGCAGATCGACAATGTGGCATCTCTCTTCAGCTTCCTCATGGACTTCCTGTCTAGCTGCATTGGTCTCATGGAGGTCTACAGAAATTCGCCAGAAACGGTCAACCTCATCATTGAGGTGTTTGTGGAAGTGGCCCACAAACAAATTTGCTACTTGGGGGAGACCAAGTCTATGAAACTGTACGAGGTATGCTTGACGCTGCTGCAGGTTTACTCCAAGAACAATCTAGGTCGCAAGAGACTAGATGTAGCCGCAGAGGAGGACCAGTATCAGGACCTTCTGCTCATCATGGAGCTCCTCACCAACCTGCTCTCCAAAGAGTTCATTGACTTCAGTGACACTGatGAGGTGTTTCGTGGGCAAGAGCAGAGCTCTGGTGCTGGACGAGCCGTATCAGCTGCTGATGTTGTGCTGTATGGGGTGAATATTGTTTTGCCCCTCATGTCTCAGGACTTGCTTAAGTTCCCTTCTCTTTGTAACCAGTATTATAAGCTCATCACTTTCATTTGTGAGATTTTCCCAGAGAAGATCCCTCAGCTGCCTGAAGAGCTCTTCAAAAGTCTCATGTGCTCCCTGGAGCTTGGCATGACCTCGATGAGCTCAGAGATCAGTCAGCTCTGTCTGGAGGCTTTATCCCCATTGGCTGAGCAGTGCGCCAAGACACAAGAAAAGGACACACCCCTATTTATTGCCACACGACATTTCCTTAAACTGGTGTTTGACATGCTTGTGCTCCAGAAGCACAACACCGAGATGACCGTAGCAGCAGGAGAAGCGCTTTATACACTAGTGTGCCTTCACCAGGCGGAGTATTCAGAGCTGGTGGAGACGCTGCTCTCCAATCAGAGGGACGCCGTGATCTACCAGCGGCTAGCGGACGCATTTAACAGCCTCACTGCCAGCAGCACGCCTCCAACCATGGACCGCAAGCAAAAGGTGGCCTTCCTGAAGAGCCTGGAGGAGTTTGTTGCCAATGTGGGGGGGCTTCTGTGTGTAAAATAAGCCGCTTCCTCAAACAAGCTTCCCCTCGCCTCCCCTCTAACAGTCAGAGAAGCCTTTCACCATGCCAAACCATGGAGATGCTGAGACCCCTCTGGGCCTTCAGACACGCGCCtccagagagcagagagaggcTGGCGAAGGCCGAGAGGGGACGGCCGGTCGCGATCGTCTCAGTCTGAGCTGACCGTTGTTTACTTTGCCACTGAGAGCTCCTCCGATGAACGTTTATGAAATGCAGAGGGGTGATCTTTCTGAAAACTGACCCCTTCCTTCCCCCTtttagacacaaacacacaagtctTTTGCAGACACTTCTCCTTGAGTGCCTTTGTTTGTGGTTTCTCACGGCTCTGATCCAGCGGTGTCCTTGGCGACAAAGAGCATCGTGTCGTACTGCTGTCACGGTAATTAGGATTGTGAGCTGTGGTTGCCTTGATAATGAAAAAGCCTTTCCCAATGAAACTGTAATTGCAGGAAGGCCCTTTTGGAAAACCAAATCACTTTTGTGTTTAAggttgtatatatattttcgaaaaagacaaaaaatgaaagtgtttaaaAGGACTGAAAGGTTTTTATAAGATTATAGTTGATGGaactttctgatatttttttttattgttatacaaTTTCACCAGGAGGACAAGGGGCTAGTTTGAATTTTTCTTTCTGATTGATTTGAATGATTGTAGTTTTACTCTTTGCCATTGTCATTTGGCCCTGATCGCAGCAGTATCACTGAAAGCGTTCTCAACAAAAGTACAGGTCTGTTAAATTATGATGGACATTTTTCTCACAATCGCCTGATGTTCCCGATAAGGTTTTTTCAGAAACAACTTCAACAGTGTTCCACTTACACTAGCGTGCACACACAACTCAGAATTGTGGAACAGTCGACGTTGCTGTAGCaataaaataccaaaaatgATGATCGAGGGATGTCAGCTGTTTTATTCAGGGCATTTGATGGACTTTCCATTTTCCATTGTTCAAAGCACTAATTGTTATTTTGGAATGCCTGAAATGATCTGTAAAGTGTATATAAACTTGCTATAAAAAGTGAGTTGTTTGTCTTGGTCTA
>XM_043248392.1
CTAGTAAAGTGGACTATGTGTTGTTCCAGGCCGCCACAGCCATCATGGAGGCAGTGGTTAGAGAATGGATCCTTCtggaaaagaacagcattgagTCCCTCAGAACATTCCTTCTCACCTACGTCTTACAGAGACCCAACAAACATTGGCCTGCTCCATCCTGACAGCTCTGTTGAGTGAGTTCTCCAGCTCCAATAAGACCAGTAACATTGGCCTCAGTATGGAGTTTCACGGAAGCTGCAAACGCATCTTTCAGgagGACGATCTCAGGCAGATCTTCATGCTCACTATGGAGGTCCTGCAGGAATTCAGTCGGAGAGAGAACCTCAACGCTCAGATGTCCTGTGTTTTCCAGCGCTACCTTGCCCTGGCCAATCAAGTGCTCAGCTGGAACTTCCTTCCACCCAATCTGGGGAGGCACTACATTGCCATGTTTGAAGCGACTCAGAATGTCATGCTCAAGCCAACCGAGTCCTGGAGGGAAACACTTCTAGACCACAGAGTCATGGACCTTTTCTTCACAGTGCACAGGAAGATCAGAGAGGACTCAGACATGGCGCAGGATTCCCTTCAGTGCCTGGCCCAGCTGGCCTCTATGCATGGCCCCATCTTCCCTGATGAGAGCGCTCAGGTGACCTACCTGGCCCACCTGGTAGAGGGATTGCTCAACATGATCAACGGGATTGAGATTGAAGACTCCGAGGCTGTAGGCATCTCCAACATCATCAGTAACCTCATCAGCACATTTCCCCGAAGTGTTCTGACAGCGCTCCCGAACGAGCTCTTCGCCTCTTTCATTAACTGCCTCACATTGCTCACATGCTCGTTTGGTCGCAGCGCCGCCCTGGAGGAGGTGCTGGATAAGGATGACATGGTGTACATGGAGGCATATGATAAGCTGCTGGAATCCTGGCTGACGCTGGTGCAGGAGGATGAGCACTTCCCCCGGGGATGCTTTGTCCAGCCGGCCGTGCAGGTCTTCAACTCCTACATCCAGTGTCACCTCGCAGCTCCTGACGGCACGAGGAATCTGACTGCAAATGGTGTCGCTTCTCATGAAGAGGAAGAAATAAACGAATTACAGGAGGACGACAGAGAGCTGTTCTCAGATCAGCTGGCCAGTATCGGCATGTTGGGCCGCATCGCTGCAGACCACTGTATACCTCTGCTCACAGGTTTGTTGGAGGACCGAGTCACACGGCTTCACGGGCAACTCCAGAGACACCAGCAGCACCTCATGGCTTCTGCAGACCCTGGCACGGTGGACCGGAAAGTTCTAGATGACCTTTATGAAGACATTCATTGGCTCATATTAGTGTCAGGTTACCTCTTGGCTGATGACCCTCAGGGTGAAACACCATTGATACCTTCAGAAGTGATGGAGTATTCTATCAAACACTCAACTGAGGTGGATATCAACACTACACTGCAGCTTCTTGGCTCTCCTGGAGAGAAGGCCACCTCCATCCCAGGATGCAACAGGACAGACTCAGTTATCAGGTTGTTATCTGCAGTGCTAAGAACCTCAGAGGTGGAGTCGCGGGCTACACGAGCGAGTCTGACTGAGCTCCTGAGTCCTCAGATGGGCAAAGACATTGTCTGGTTTCTTCGGCGCTGGGCCAAGACATACCTGTTAGTGGATGAGAAACTCTACGGCCAAATCAGTATGCCTCTCAGCACAGCTTTTGGAGCAGACACGGAGGGAGCGCAGTGGATCGTGGGATATCTGTTGGAGAAAGTGATCAATAATCTGTCGGTGTGGAGCTCTGAGCCAGAGCTGGCTAATGACACTGTGGAGCTGCTGGTGACTCTggtggagaagagagagagGGCAAACATTGTAGTGCAGTGTGAGAACTGGTGGAACTTGGCCAAGCAGTTTGCCAGTCGCAGCCCTCCCTTACATATGCTGTCCAGCACAGTCCAGCGGACTCTGATGAAAGCCCTGGTCCTGGGCGGCTTTGCTCATATGGATTCTGATACCAAACAGCAATACTGGGCAGAGGTACTGCATCCACTCCAGCAGCGCTTTCTCAACCTCATTAACCAGGAGAACTTCGCCCAGATCTGTCAAGAGGAAGCCGTGAAACAGGAGATCGTTGCCACTCTAGAAGCTCTGTGTGGCATCGCAGAAGCAACGCAGATCGACAATGTGGCATCTCTCTTCAGCTTCCTCATGGACTTCCTGTCTAGCTGCATTGGTCTCATGGAGGTCTACAGAAATTCGCCAGAAACGGTCAACCTCATCATTGAGGTGTTTGTGGAAGTGGCCCACAAACAAATTTGCTACTTGGGGGAGACCAAGTCTATGAAACTGTACGAGGTATGCTTGACGCTGCTGCAGGTTTACTCCAAGAACAATCTAGGTCGCAAGAGACTAGATGTAGCCGCAGAGGAGGACCAGTATCAGGACCTTCTGCTCATCATGGAGCTCCTCACCAACCTGCTCTCCAAAGAGTTCATTGACTTCAGTGACACTGatGAGGTGTTTCGTGGGCAAGAGCAGAGCTCTGGTGCTGGACGAGCCGTATCAGCTGCTGATGTTGTGCTGTATGGGGTGAATATTGTTTTGCCCCTCATGTCTCAGGACTTGCTTAAGTTCCCTTCTCTTTGTAACCAGTATTATAAGCTCATCACTTTCATTTGTGAGATTTTCCCAGAGAAGATCCCTCAGCTGCCTGAAGAGCTCTTCAAAAGTCTCATGTGCTCCCTGGAGCTTGGCATGACCTCGATGAGCTCAGAGATCAGTCAGCTCTGTCTGGAGGCTTTATCCCCATTGGCTGAGCAGTGCGCCAAGACACAAGAAAAGGACACACCCCTATTTATTGCCACACGACATTTCCTTAAACTGGTGTTTGACATGCTTGTGCTCCAGAAGCACAACACCGAGATGACCGTAGCAGCAGGAGAAGCGCTTTATACACTAGTGTGCCTTCACCAGGCGGAGTATTCAGAGCTGGTGGAGACGCTGCTCTCCAATCAGAGGGACGCCGTGATCTACCAGCGGCTAGCGGACGCATTTAACAGCCTCACTGCCAGCAGCACGCCTCCAACCATGGACCGCAAGCAAAAGGTGGCCTTCCTGAAGAGCCTGGAGGAGTTTGTTGCCAATGTGGGGGGGCTTCTGTGTGTAAAATAAGCCGCTTCCTCAAACAAGCTTCCCCTCGCCTCCCCTCTAACAGTCAGAGAAGCCTTTCACCATGCCAAACCATGGAGATGCTGAGACCCCTCTGGGCCTTCAGACACGCGCCtccagagagcagagagaggcTGGCGAAGGCCGAGAGGGGACGGCCGGTCGCGATCGTCTCAGTCTGAGCTGACCGTTGTTTACTTTGCCACTGAGAGCTCCTCCGATGAACGTTTATGAAATGCAGAGGGGTGATCTTTCTGAAAACTGACCCCTTCCTTCCCCCTtttagacacaaacacacaagtctTTTGCAGACACTTCTCCTTGAGTGCCTTTGTTTGTGGTTTCTCACGGCTCTGATCCAGCGGTGTCCTTGGCGACAAAGAGCATCGTGTCGTACTGCTGTCACGGTAATTAGGATTGTGAGCTGTGGTTGCCTTGATAATGAAAAAGCCTTTCCCAATGAAACTGTAATTGCAGGAAGGCCCTTTTGGAAAACCAAATCACTTTTGTGTTTAAggttgtatatatattttcgaaaaagacaaaaaatgaaagtgtttaaaAGGACTGAAAGGTTTTTATAAGATTATAGTTGATGGaactttctgatatttttttttattgttatacaaTTTCACCAGGAGGACAAGGGGCTAGTTTGAATTTTTCTTTCTGATTGATTTGAATGATTGTAGTTTTACTCTTTGCCATTGTCATTTGGCCCTGATCGCAGCAGTATCACTGAAAGCGTTCTCAACAAAAGTACAGGTCTGTTAAATTATGATGGACATTTTTCTCACAATCGCCTGATGTTCCCGATAAGGTTTTTTCAGAAACAACTTCAACAGTGTTCCACTTACACTAGCGTGCACACACAACTCAGAATTGTGGAACAGTCGACGTTGCTGTAGCaataaaataccaaaaatgATGATCGAGGGATGTCAGCTGTTTTATTCAGGGCATTTGATGGACTTTCCATTTTCCATTGTTCAAAGCACTAATTGTTATTTTGGAATGCCTGAAATGATCTGTAAAGTGTATATAAACTTGCTATAAAAAGTGAGTTGTTTGTCTTGGTCTA

Function

symbol description
xpo4 Predicted to enable nuclear export signal receptor activity. Predicted to be involved in protein export from nucleus. Predicted to act upstream of or within protein transport. Predicted to be located in nucleus. Predicted to be part of nuclear pore. Predicted to be active in cytoplasm. Is expressed in several structures, including adaxial cell; alar plate midbrain region; eye; midbrain; and musculature system. Orthologous to human XPO4 (exportin 4).

NR:

description
PREDICTED: exportin-4 isoform X2

GO:

id name namespace
GO:0015031 protein transport biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K25203 XPO4; exportin-4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248391.1 True 4617 mRNA 0.49 23 14521398 14551453
XM_043248392.1 False 4220 mRNA 0.49 20 14521398 14546700

Neighbor

gene id symbol gene type direction distance location
eef1akmt1 n6amt2,LOC107658251,LOC107668884,LOC107597381,LOC107712275,LOC107569169,LOC107724476 coding downstream 57 14518928 ~ 14521341 (-)
cryl1 cryl1,LOC107668879,LOC107724506,LOC107712274,LOC107658254 coding downstream 14444 14496786 ~ 14506954 (-)
gjb8 cx30.3,LOC107668881,LOC107569159,LOC107712256,LOC107597425,LOC107658209,LOC107716308 coding downstream 25303 14493429 ~ 14496095 (-)
gja3 gja3,LOC107668878,LOC107712277,LOC107569119,LOC107658255,LOC107597383 coding downstream 28697 14486809 ~ 14492701 (-)
arhgef7a arhgef7a,LOC107712280,LOC107668898,LOC107569023,LOC107597388 coding downstream 94592 14408577 ~ 14426806 (-)
lats2 lats2,LOC107724484,LOC107569193,LOC107712271,LOC107658249,LOC107668891,LOC107597418 coding upstream 729 14552182 ~ 14569134 (-)
LOC122351989 LOC107668905,LOC107569207,LOC107724507,LOC101884374 coding upstream 18357 14569810 ~ 14573059 (-)
ska3 LOC107724453,LOC107668865,LOC107569224,LOC107597424,LOC107577924 coding upstream 23342 14574795 ~ 14578272 (-)
hcn5 si:rp71-68n21.12,LOC107724451,LOC107712254,LOC107658208,LOC107668864,LOC107569239,LOC108270784 coding upstream 27830 14579283 ~ 14585833 (-)
pla1a LOC107724500,LOC107668900,LOC107569279,LOC107712265,LOC107597373 coding upstream 43941 14595394 ~ 14602797 (-)
G70332 LOC107724468 non-coding downstream 274070 14244287 ~ 14247328 (-)
LOC122352120 NA non-coding downstream 332397 14173817 ~ 14189001 (-)
G70309 NA non-coding downstream 596562 13924616 ~ 13924836 (-)
G70308 NA non-coding downstream 597294 13923749 ~ 13924104 (-)
G70306 NA non-coding downstream 642986 13878124 ~ 13878412 (-)
G70393 NA non-coding upstream 38405 14589858 ~ 14590275 (-)
G70396 NA non-coding upstream 42810 14594263 ~ 14595342 (-)
G70438 LOC107600383,LOC107655530,LOC107720111 non-coding upstream 365347 14916800 ~ 14918840 (-)
LOC122352110 NA non-coding upstream 385671 14937124 ~ 14942863 (-)
G70494 LOC107740907,LOC107668887,LOC107600382,LOC107720110 non-coding upstream 423959 14975412 ~ 14981853 (-)
LOC122351495 NA other downstream 148724 14359646 ~ 14372674 (-)
G70317 NA other downstream 267622 14196479 ~ 14253776 (-)
G70294 NA other downstream 581530 13938259 ~ 13939868 (-)
rif1 LOC107658288,LOC107555351,LOC107658286,LOC107725242,LOC107680950 other downstream 608455 13879570 ~ 13912943 (-)
G70261 LOC107682829,LOC107723691,LOC107555352,LOC107658202,LOC107555050 other downstream 708071 13807822 ~ 13813327 (-)
G70549 NA other upstream 751650 15303103 ~ 15305975 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other upstream 837765 15389218 ~ 15399437 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other upstream 1219968 15771421 ~ 15771864 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other upstream 2169351 16720804 ~ 16746222 (-)
G70986 pou2f1b,LOC107748141 other upstream 2265687 16817140 ~ 16823775 (-)

Expression


Co-expression Network