il17d (LOC107724475,LOC107658252,LOC107712276,LOC107597382)



Basic Information


Item Value
gene id il17d
gene name LOC107724475,LOC107658252,LOC107712276,LOC107597382
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14517379 ~ 14518723 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043248403.1
CGACGAACTAGAGGTTCTGTAGGTCGCTTTAAGAGCTCTCCGCGGATTTACTTTATCTTTTCCAGCAATCCCTTCCTGACAGTAACGCGGGTTTAGATACAGTGAGATCTGAAATGCGCGGTCGGTTTGCGTCGACGCTGGTGTTGGCGTTGCTGTGGTGTTGCGGGAGCGCGCCGGGTGAACGGGGGCTGAAGGTGTCCAGGAGAGCGCCTAGGACTCGCTCCTGTCTCGACTTGCCGGAGGAGATTTTGGAGCAAATGTTCGGGAGGCTCTCGGTCGGGGTTCTCAGCGCGTTTCATCACACCCTGCAACTCGCGCCTCCAGAGCGACACAATCTAACCTGTCAGTCAGCCTCTCGTCTGGCGCGCGACAGACCGCGCACCCCGGTCAACTTCCTCAGCCTCTCGCCCTGGGCGTACAGAGTCTCCCATGATCCTTCGAGGTACCCTCGATATCTCCCGGAGGCTTATTGTTTGTGTAAGGGATGCCTGAGCGGACCGAACGGGGAGGAAAGCGAGCGCCTCCGCAGCACTCCAGTGTTCATGCCGACAGTCATACTGCGCCGGACCGGTTCGTGCGTCGGGGGCCGGCATTCCTACACGGAGAGCTACGTGTCCATCGCCGTGGGTTGTACTTGTGTGCCATTGTtggaaaaagacagaaaaacacagaagagCAAGCCAAGCGTGAAAAGAGTACAGTCTAAAAATTCCAGCACCTTTAGAAAGAATGGACTAAACTGATccatttgagctttttttttctgttttcttactttcattttttcttttagttggTGAAAGGAAAAACGTGAGACAGAACTCGTTCCGGCAGCTGCATATTCTAGACCCTAACGCCAAGCAAGAGGAAAACTTTCTGTgccaa

Function


NR:

description
interleukin 17 isoform D precursor

GO:

id name namespace
GO:0006954 inflammatory response biological_process
GO:0071222 cellular response to lipopolysaccharide biological_process
GO:0005576 extracellular region cellular_component
GO:0005125 cytokine activity molecular_function

KEGG:

id description
K05492 IL17D, IL27; interleukin 17D

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043248403.1 True 885 mRNA 0.54 2 14517379 14518723

Neighbor


gene id symbol gene type direction distance location
ift88 ift88,LOC107712272,LOC107658253 coding upstream 188 14506969 ~ 14517191 (+)
zmym2 zmym2,LOC107597385,LOC107569087 coding upstream 38815 14461924 ~ 14478564 (+)
mphosph8 mphosph8,LOC107658258,LOC107668876 coding upstream 56954 14449476 ~ 14460425 (+)
aff3 LOC107569057,LOC107668839,LOC107658210,LOC107597387,LOC107724445,LOC107712257 coding upstream 69577 14430763 ~ 14447802 (+)
mrpl30 mrpl30,LOC107724503,LOC107668904,LOC107568953,LOC107705162,LOC107658263 coding upstream 230318 14285948 ~ 14287061 (+)
sap18 sap18,LOC107597378,LOC107668906,LOC107569214 coding downstream 54393 14573116 ~ 14574514 (+)
popdc2 popdc2,LOC107724501,LOC107569269,LOC107668901,LOC107597374,LOC107712266,LOC107658244 coding downstream 71750 14590473 ~ 14595370 (+)
wars2 wars2,LOC107668852,LOC107724450,LOC107658241,LOC107712263 coding downstream 123472 14642195 ~ 14657243 (+)
tbx15 tbx15,LOC107724509,LOC107712261 coding downstream 139540 14658263 ~ 14678569 (+)
gdap2 gdap2,LOC107668848,LOC107658195,LOC107724478,LOC107569935 coding downstream 239883 14758606 ~ 14778118 (+)
G70069 LOC107555327,LOC107723673,LOC107658285,LOC107673585,LOC107729410 non-coding upstream 45562 13948753 ~ 14471817 (+)
G70125 NA non-coding upstream 181628 14332300 ~ 14335751 (+)
LOC122352011 NA non-coding upstream 187895 14306547 ~ 14329484 (+)
G70064 NA non-coding upstream 577649 13931619 ~ 13939730 (+)
G70045 si:dkey-91i10.3,LOC107658292,LOC107725254,LOC107555015,LOC107683415,LOC107723676,LOC107555356 non-coding upstream 730258 13777632 ~ 13787121 (+)
G70181 NA non-coding downstream 60547 14579270 ~ 14580468 (+)
G70184 NA non-coding downstream 65508 14584231 ~ 14584488 (+)
G70185 NA non-coding downstream 65868 14584591 ~ 14585026 (+)
G70198 NA non-coding downstream 95426 14614149 ~ 14615034 (+)
G70199 hao2,LOC107724497,LOC107569314,LOC107668850 non-coding downstream 96873 14615596 ~ 14617544 (+)
ccnt2a ccnt2a,LOC107658298,LOC107725237,LOC107723659,LOC107684218,LOC107555058,LOC107555362 other upstream 832544 13676163 ~ 13684835 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other upstream 1212788 13289693 ~ 13304591 (+)
G69755 NA other upstream 1531401 12984868 ~ 12985978 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other upstream 1713971 12732298 ~ 12803408 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other upstream 1887844 12627535 ~ 12629535 (+)
LOC122351767 NA other downstream 68359 14587082 ~ 14589439 (+)
si:ch211-168k14.2 si:ch211-168k14.2,LOC107681321,LOC107748618,LOC108441415,LOC105905900,LOC108266656,LOC107600399 other downstream 882404 15401127 ~ 15425361 (+)
LOC122351678 hspe1,mob4,LOC107690609,LOC107595852,LOC107569672,LOC107731766,LOC106586370,LOC105016277,LOC100701317,LOC103156730,LOC101472107,LOC102310674,LOC102783361,LOC108238849,LOC107690608,LOC106582314,LOC105899369 other downstream 1189478 15708201 ~ 15715901 (+)
plcl1 LOC107569711,LOC107731752,LOC107690606,LOC107719808,LOC107659890,LOC107595846 other downstream 1215847 15734570 ~ 15789702 (+)
rabl3 rabl3,LOC107569739,LOC107690631,LOC107659889,LOC107595844,LOC107736356 other downstream 1380704 15899427 ~ 15901720 (+)

Expression



Co-expression Network