LOC122351400 (LOC107568797,LOC107724467,LOC107682866)


Basic Information

Item Value
gene id LOC122351400
gene name LOC107568797,LOC107724467,LOC107682866
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14205767 ~ 14207351 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248463.1
ATGGAGGCCAAGCGAGTGAAGAGAGATGTTAAAACTCTGCTtgATGAATATATTGGACAGAGACTCAGAGAAACTGGTTTTGATCCAAAGGGAAAAAGCACTTCTACAATGTTAGATGATTTGGCCCATTATGACTTGGCTATAAGTGTGGCTTTGTGGCAGCTCAATAAAGATAATGCAGCTGGGAATGACTACATAGGGATTGGCAGTTTAAGACACATTAGCCAGTACCCTAATCACCTGGAAAGAGAAGCAATGATCCTTTCTTCCTTTGCTGGAATGCTTCTGAACAGCTTACCTATTGAAGACATTCTGTCTCTGTACAATTGCAAGCCAGTGGCGTCCTACCCTCATAATCATGCTAAGGGCAACATTGTTCACCCATTCTCCCTCTCTTATCATCCGTTTGCTATGCTCTATTCATTCAAAGCAGTAGACCACTCAAGAAAACACACCCAGGTACTGAAACGCTGGATCAAGGAACACGGTAAACAGGAGGTCTCTCCAGAGAGACCGGAGCCCTCCACCTCGTCTTCCAGCTCCTCATTTAGTGTGAGTGATAGCGAGGACTCCTTAAAAGATGAAACAGCTCACTATGAGGGCTCGCAAGAATCTCTGCAGGACTGA

Function

NR:

description
PREDICTED: uncharacterized protein C2orf80 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248463.1 True 627 mRNA 0.45 8 14205767 14207351

Neighbor

gene id symbol gene type direction distance location
crygm7 crygm7,LOC107705168,LOC107597399,LOC107724483,LOC107568737,LOC107658272,LOC105899368 coding downstream 2279 14202785 ~ 14203488 (-)
si:dkey-57a22.14 LOC107724481,LOC107668873,LOC107597431,LOC107658270,LOC107705154,LOC107568754 coding downstream 4103 14200868 ~ 14201664 (-)
crygm6 crygm6,LOC107724479,LOC107568790,LOC107668857,LOC107658269,LOC107705155 coding downstream 5702 14199226 ~ 14200065 (-)
LOC122351901 si:dkey-57a22.15,LOC107668860,LOC107597434,LOC107724448,LOC107658273,LOC107568805,LOC107705156 coding downstream 8301 14196704 ~ 14197466 (-)
crygm1 crygm1,zgc:153846,LOC107568769,LOC107668858,LOC107724461,LOC107705171 coding downstream 10275 14194683 ~ 14195492 (-)
sgo2 LOC107724470,LOC107668892,LOC107568829 coding upstream 796 14208147 ~ 14212935 (-)
kctd12.1 kctd12.1,LOC107724452,LOC107668866,LOC107658214,LOC107705151,LOC107580341 coding upstream 68218 14275569 ~ 14277666 (-)
zgc:162944 zgc:162944,LOC107724454,LOC107597427,LOC107658212,LOC107705163,LOC108424409,LOC103034916,LOC108266838 coding upstream 76251 14283602 ~ 14285530 (-)
txndc9 txndc9,LOC107568936,LOC107724502,LOC107668903,LOC107658261,LOC107705160,LOC107597391 coding upstream 79936 14287287 ~ 14290228 (-)
rev1 rev1,LOC107658260,LOC107568994,LOC107668902 coding upstream 83498 14290849 ~ 14306284 (-)
LOC122352120 NA non-coding downstream 16766 14173817 ~ 14189001 (-)
G70309 NA non-coding downstream 280931 13924616 ~ 13924836 (-)
G70308 NA non-coding downstream 281663 13923749 ~ 13924104 (-)
G70306 NA non-coding downstream 327355 13878124 ~ 13878412 (-)
G70305 LOC107725229,LOC107658288 non-coding downstream 329301 13873518 ~ 13876466 (-)
G70332 LOC107724468 non-coding upstream 36936 14244287 ~ 14247328 (-)
G70382 NA non-coding upstream 269981 14477332 ~ 14562992 (-)
G70393 NA non-coding upstream 382507 14589858 ~ 14590275 (-)
G70396 NA non-coding upstream 386912 14594263 ~ 14595342 (-)
G70438 LOC107600383,LOC107655530,LOC107720111 non-coding upstream 709449 14916800 ~ 14918840 (-)
G70294 NA other downstream 265899 13938259 ~ 13939868 (-)
rif1 LOC107658288,LOC107555351,LOC107658286,LOC107725242,LOC107680950 other downstream 292824 13879570 ~ 13912943 (-)
G70261 LOC107682829,LOC107723691,LOC107555352,LOC107658202,LOC107555050 other downstream 392440 13807822 ~ 13813327 (-)
tmem163a tmem163a,LOC107658221,LOC107725256,LOC107684456,LOC107555363,LOC106586306,LOC106582396 other downstream 531960 13642303 ~ 13673807 (-)
gypc gypc,LOC107723681,LOC107725252,LOC107555063,LOC107567781,LOC107684853,LOC107695565 other downstream 710100 13473135 ~ 13495667 (-)
LOC122351495 NA other upstream 152295 14359646 ~ 14372674 (-)
G70549 NA other upstream 1095752 15303103 ~ 15305975 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other upstream 1181867 15389218 ~ 15399437 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other upstream 1564070 15771421 ~ 15771864 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other upstream 2513453 16720804 ~ 16746222 (-)

Expression


Co-expression Network