si:dkey-229b18.3 (LOC107748215,LOC107663849,LOC107720115,LOC107655527,LOC107572534)


Basic Information

Item Value
gene id si:dkey-229b18.3
gene name LOC107748215,LOC107663849,LOC107720115,LOC107655527,LOC107572534
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 10042165 ~ 10051534 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248467.1
TGCCGCGAGTCTTCGACCGATGGTAAAAACTTCGTAGACGCACCTCAGAGCATCTCTGATTGCAGAAACGTCTCGATGTCGGTGGATGAAGCGCGGTTCAAAAGTTCTGCTTTTCACACCGTTATAAGCAAGCTGCACCCAAAGTAGAGGCGCCTTGAGAACGAGGTCCGGTCGAAATGGCAAGTGAATGCACCTACAGCGCTCAGTACGACGCGGACGACACCTTTCGCGGCTCTGAACGCGCGGGTTATGTGAACGGCGGCCGCGCGGGCGTCGCGTCTTCTGCCTTCTTCGAGGTCATCGGCGGCTCTCTGTACCGCAGAAAGTTGGAGAAGGGTTTCGTCCAGTACCGGGAGGTGCTGGCCGAGGATAAGCGACTAAAGTCCATAGCCACCTTCCACGAGAAAGGACCAGGCAAGTCGCACCACACCCTGGAGGACACATACAGACTGGTGGCAGAGCACTATTGGTGGGAAgGAATGTATTTTCAAGTCCGAGACTATGTCTTTGGCTGTGAGCAGTGTCAACGCAGTCAGTCGGAGAGATCAGTGTGTTCTGATGTGGGACTTATCTCCAGGATTGTGGAAACACACAGTCATCAAGTCTTAAGTAAGCTCAATAGCCAACGGGAAGCAGGGCTCTTCTGCGATGTCACACTGAAAACTGGTGGTGGCCAGTCTTTCGTTGCCCACAAAGCAGTCCTTGCAGCGGTGAGCGAGTACTTCCAGGAGTTATTTACTGAAATGGAATCAGCCACTGATCCCCAGTCACATGTTGATCTCACAGGTTTCAGTGAGAAGAGCTTGCTTGCTTTACTTGAGTTCTCATACACTTCCACCCTCAATCTGAATTTGGACATCTTGACAGAGGTTTGTGCCATGGCCCGCCATTTACGCATGTGGCCTGCCCTTGAGGCGTGCTCTGCTTTAAAAAGGGAGCGAGAGACTTGTCAGTTACGTTCCAGAATGCACAGTTCTCCTGGGGAACCAAATAATTCAATGCCTGGACCTTTCAGGAGGGACCACTCCTCAACTTCAGGAGGGAAAGTGGGACTCAAGAGGCGAAGAGAGGATGAGGAAGGAGAAGGCTCTGGGTTTTCCTGGAACATTCAAGCACAGCACAGAGAGCACATTGTTGATACGGTCACAGATGAATTTGAAACCTCAAACACTCAGTTTCAATGCCAAGTCCCTTCTGGTTTTCAGGTGGAGGAAAATGGCTTTCCATGCAGCCCAAATCGCAGAATGAAGCTCATGGACTTTAAATCTccttcctgcaaaaaaaaactgtcctcCCACCCCTCTTCTTCAATCATCTCAACATCACCTTGTACCTCTACTCGTTCTTCCTCTCCATCACGCCGTCTGCTTCGTTCCTCACCTGGTGCTGCACTTGCTTTGCGCAGACTCCTGCCTAAAATTGACCTTTCCACCAAGAGAAAGAGGAAATCTTCTTCCTACAGGTCGTACAAGCCCCAGTGTGAATTCTCAGTGACTCCATCCCAATCTCAGGCAAATTCTTTGACCCATGTTACCTCAGTAAAGGTAAAAGACGAAGATGTGGAGGAGGAGGTTTGTAACACCGTCCCACAGGATGAGGTGCATAGCCCACGTGCTCAGGAGAAATACCGTCTTCTTAGCTTCCTTGGCTTGCAGAGGAAATCCTTGGTGCCTGGTCCAGAGGAGCTGTCCGGCTGGGGGCAGAAAAAACGACTTAGGAAGTTAAAAGTCAATGATTATTCACTCACAGCCCGACGTAAACCTCGTGCACAGGGCGTCCCGTTGAGTTTCGGAACTAGTTTAGGGGTGCTTGCTGCTGTGAATCCTACTCTGTCCCTCTGTGACATGAGCAGAATGGACTTGCTAAACAGACCTGTGAAAGTAGAACCTTGGAACCAAGAAAGGTCTAAAAGGAAAAGACATGATCCTGCAGGGCAAGATGAGCAGCCGATTGCGAGAGCTACTCGTAGTAGGTCATTGCTGCAGACAGAGTCCAGTGCAACGAATCGACCGCTCAGACGCCACCACAGAAATGAAGATAAAGCACCTTCCCACCCTGCACGAAGAGGCAGAGTACCAGCACACAATGCCTCTTCTCCTTCAAAAACCACTACGCTCAGGATAAAACAGGAATCTTCTGAAAGTGCCATCCTGCAACCTATTCACCGTCGCAATACTGCCTATGATCCCCAGAGAACTTCTCCTAAAGCAACGGGACGTAGGGGTCGCCCACCAGCAGATCGCACAGTAAGAGTAGCCACAACAAAGTTGCAGCACACAAAGCGGCACAAACCTGGGCGTCCCCCAATAGACAAACCTAAGAGCTCAAAACAAATAGAAAGCAAAACGAAATGCAACCATGCAACAGGAATCCCACATGCAAAGCACAGCAGAACTGAGAGAGGAACACAGGTCAAGGAGAATAGAAAAATTAAGGAACATGGCAACAGAAAAGAAAGTCCTGAAGTTCCCTATGCCATTGTGAACTGGGATACTTCCAACAATCAGCAACTTCACAGCCATCCCCTTTACAAAACTATAAAGGAAGAGCCAGCTGACCCCTTGCCCCTAACCCCGCCATTCCCAACCAGTGACTCCTCAGACCTGGGGAAGCGTCAGAGCAAACCACCCATCAAGCTGTTGGATCAAGGCTTCCTTTTCGGCTTTTGTCGGTCACCAAGTGGCATTAAACGGGAGGAGGAGAGTGTGGACATCTACCTAACTCATGGAAATAGTTCCCATTGCGATTCATCACCTGGCATGGTGAGAAGAGATCGGGTGAGGGCCAGGATTATGCCAGACCGGACAGGTCTCAATGGGCCTCACTGGGCTGGACTTGGCAACAGGCACTCACCCTTTTCCCAAAGGACTTCTCTTCGAGTGAAGACAGAGAAGGATGAAACGGGAGTTTCCCAAGGGCCACAGGTTAGCCGAGTTTCTAGACACCCCCAGGTCAGCAAGAGGAGCTGTAAAGTCAAGAAAGAACCTACAAAGACAAAGAATGTAAATAAGCTGCTTCCTCTGAGCAGTCGGCGTTCCGTCCTACTGGAATCCATCCGACGGGCACGTCTGAAACAACAGAAGGGTCCTCAAGGTCAGGTCTCCAGTGGACCACATGCTTGCCTGCAGTGCAGAGCCTCCTATAGGGACTGTGATGCTCTTATTATGCACCAAATCAGGCATATTGAAGGCAAACACTGGCCCTGCCCGTTGTGCAGCAAAACTTTCTTCAGACAGAGAAATGTGAGGAATCACATAAGGACACATAATCCCAAAATCTACAAATGCCGCCAGTGCATCGCTGCTCAGTGAGGTAAAAGCCACAGGATTAAATGAAGAGGAGCAAagctttgtttctttaaatattaacgCTGTAAATACAAAGGATCTGTGATGTATGACAATGAGGttcaatttattaatgtaaataatgttatgatggtttaaattgtctttttcctcataataattgttgttgttatttaagtAACTAAGCTGAAGTTGCTTTGCATTTGAAACAGATGTTAAACCATAACTTGAACCCATGGTGTATTTCTCAGGGGGCGGAGCCTGATGGTTTAAGGTGATATATGTATAATGAGAATCGTGTAGAATGCTTTAAATTTGTTACTACTAATGTAATTACTGCAGttgttattactattgttattatgattatttttataaatgacataATCTTGAGTGCACTTAATATTCGCTTTGTTTTGAAACCTAAGAAAGATGCGATGGACTGGGATGTACTTGAATGATTGTAGGAGTTGAGCTGGTGGACTGCCCTTAATGTATGGTTGTCTGGCAATGTTTTAGAAAACTATTACAGAAATTAGTcaggtattttaaaatgaaggttTGTTAATGGGGGCAGAGTTATTCTAACAATCACAAAATGGTTAACCTGCACTGGTGAAATACCATGATTTTTGGTATATACCgttttgtgaaaacatttgacTACAGCTTTTCAAAACGAGACAGTGACAGTGTCTTTCAAATAAGGGAATCCCAAAACGtctaatgtgatttttatttttatttccccccCTCCTCCTTTGATAATTCCTTCTCTGAATTTTTATGCATATCCTTCtttaacataaaatgcaatGGACTTATGAAGAGTTTTAAATGTTGAGGTGTTTCGTCTGAAAACACGAGTTGAAAATGTAGAAAGACCAAATAgccatataaataaattttgcattttaaagtttaaaatttgcTTAATGTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC108266764

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248467.1 True 4248 mRNA 0.46 7 10042165 10051534

Neighbor

gene id symbol gene type direction distance location
chaf1b chaf1b,LOC107748217,LOC107663888,LOC107655528,LOC107720114,LOC107572528 coding upstream 3803 10030801 ~ 10038362 (+)
LOC122351209 LOC107748218 coding upstream 11613 10022693 ~ 10030552 (+)
LOC122351208 LOC107663876,LOC107707766,LOC107724486,LOC107569399 coding upstream 19935 10007942 ~ 10022230 (+)
LOC122351484 LOC107663876,LOC107707766,LOC107724486,LOC107569399 coding upstream 35653 9993877 ~ 10006512 (+)
LOC122351260 hs6st3b,LOC107733651,LOC107555209,LOC107663930,LOC107600438,LOC107720131,LOC107655503 coding upstream 135984 9895081 ~ 9906181 (+)
gja8a cx50.5,LOC107748212,LOC107555237,LOC107720117,LOC107600427,LOC107655525 coding downstream 30742 10082276 ~ 10086961 (+)
asb11 asb11,LOC107748226,LOC107720119,LOC107655497,LOC107600386 coding downstream 62460 10113994 ~ 10117548 (+)
sytl5 sytl5,LOC107555233,LOC107663897,LOC107748209,LOC107655524 coding downstream 66327 10117861 ~ 10139245 (+)
otc otc,LOC107555229,LOC107663890 coding downstream 108807 10160341 ~ 10162936 (+)
mid1ip1a mid1ip1,mid1ip1a,LOC107655494,LOC107748224,LOC107663855,LOC107555231,LOC107600390 coding downstream 113646 10165180 ~ 10166422 (+)
G69003 NA non-coding upstream 150585 9890651 ~ 9891580 (+)
G68908 NA non-coding upstream 466511 9575421 ~ 9575654 (+)
G68901 NA non-coding upstream 629430 9255332 ~ 9412735 (+)
G68900 NA non-coding upstream 800778 9240938 ~ 9241387 (+)
G68897 NA non-coding upstream 847862 9180904 ~ 9194303 (+)
G69028 NA non-coding downstream 3962 10055496 ~ 10056501 (+)
G69031 NA non-coding downstream 9524 10061058 ~ 10061611 (+)
G69032 NA non-coding downstream 10151 10061685 ~ 10061887 (+)
G69033 cx45.6,LOC107663873,LOC107748213,LOC107572527,LOC107655501,LOC107720145,LOC107600426 non-coding downstream 10674 10062208 ~ 10062436 (+)
G69034 NA non-coding downstream 19124 10070658 ~ 10070891 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 475168 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 881344 9156045 ~ 9160821 (+)
si:ch1073-416j23.1 si:ch1073-416j23.1,LOC107749868,LOC107663920,LOC107556448 other upstream 892072 9142592 ~ 9150093 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other upstream 1170532 8867097 ~ 8871633 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other upstream 1175860 8863387 ~ 8866305 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other downstream 40816 10092350 ~ 10113356 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other downstream 115802 10167336 ~ 10174783 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other downstream 277197 10328731 ~ 10395230 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 970202 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 1414070 11465604 ~ 11490149 (+)

Expression


Co-expression Network