slc15a1a (LOC107752613,LOC107689491)


Basic Information

Item Value
gene id slc15a1a
gene name LOC107752613,LOC107689491
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 4860892 ~ 4869233 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248520.1
cacacacacacacgttcacacactTCCAGTATGCCAGACGAAAAGATGGACGAGaccaagaaaaagaagaaaaagACGGCTGAGTGCTGTGGATATCCAATCAgcattttctttattgtggTTAATGAGTTCTGCGAGAGGTTTTCCTACTATGGCATGCGAGCTGTGTTGGTGCTGTATTTCCGCTATTTCCTGCTTTGGGATGATGACCTTGCGACCTCCATCTATCACGCTTTTGTGGCGCTGTGCTACTTGACGCCCATCTTGGGCGCCATCATTGCCGATTCCTGGCTCGGGAAGTTCAAAACGATCATATACCTGTCCATAGTGTACGCCATCGGCCAGGTCACCATGGCCGTCAGCACCATTCATGACATCACGGATACAAACAGAGACGGCACGCCGGATAACTACACCTTCCACATCGCTCTGTCCATGCTGGGTTTGATCCTCATCGCTCTGGGCACTGGGGGAATCAAACCATGTGTGGCTGCATTCGGTGGCGATCAGTTTCAGGAACATCAGAGTCGCCAACTCAACACGTTTTtctcagtgttttatttgtgcatcAACGCAGGAAGTCTGCTTTCCACACTCATTACGCCTGTTCTCAGagCGCAGCAGTGTGGCATACACACTCAGCAGCAGTGTTACCCTCTGGCTTTTGGGGTCCCGGCCGCTCTCATGGTCGTATCTCTGGTGGTGTTCATTGCTGGAAGTGGCATGTATGTCAAAACTGATCCAGAAGGAAACATTATGTGGTCCGTGTGTAAATGCATAGGGTTTGCCATCAAAAACCGTTTCAGGCACAGAAGCAGCAGGTATCCAAAGAGGGAGCACTGGATGGACTGGGCCGATGAGAAATATGATAAACTTCTTATCGCTCAGATAAAGATGGTGTTGAAGGTGTTGTTCCTCTACATTCCTCTGCCCATGTTTTGGACCCTGTTTGATCAGAAGGGCTCCCGCTGGACTCTCCAAGCCACCACCATGAGCGGAGACTTTGGAGCATTCATCTTGCAGCCAGATCAGATGCAGACTGTGAACCCCATCCTGATCCTGACCCTGGTGCCTATTATGGACCGGTTAATTTTCCCTCTCATCCAAAAGTGTGGCCTCAATTTCAGCCCTTTGAAGAGAATGACGGTTGGCATGCTGTTTGCTGCCATGGCGTTTGTTTCTGCGGCCCTAGTCCAGATTGAGATCGACAAAACACTGCCGAATTTCCCATCGTCCTCTGAGAGCCAGCTGAAGGTGGTGAACATGTACAGCAGCACACTGAATGTGACCATCTCACCCAACGAACCTCTTCTGATAGAGTCCTTTGGGagCAGTGCAGAGTACGTGACGCTCGACCATCAAGACATCACCGTGTCCTTGAACACCACTCCTGTGATCACTAAAGCTTTCAGTTTAATCAAAGGGGGGCGCCAGACCCTGATCATTCCCTCCGACCCAGCCATCATGTATCTGAAAGAAGACGTCAAGTCCAAACCAAGGGAAGGAAAGAATGCCATTAGGTTTGTGAACGGCTGGACAGCAGAACTGAATATCACTAACCTGGATTCCATCGAGCCATCAGCCACTACTAACTACACGCTGGTCAATCAGGGGAAGCGGGATTTCGTGCTCAAACATGGTGAACAGTGGTGTGAGTTTTCCCGTAAGTTTGGATTCGGTGCTTCATACACCTTCCTCATCCCCAGCGACGTGTTCTCATCTGAGTGCAAGTCTATAGTAGAGGTTGAGGACATTAAGCCCAACTCGGTCCACATGGCTCTGCAGATTCCCCAGTACTTCCTTATTACTACAGGAGAGGTCATGTTCTCGGTCACTGGCCTGCAGTTCTCATACTCACAGGCTCCTAAGAACATGAAGTCAGTGCTGCAGGCCGGCTGGTTGTGTACCAACGCCGTGGGAAACATCATTGTGCTGATTGTGGCAGAGCTGGGAAAGCTTCCCAAACAGtggGCAGAGTATGTGCTGTTTGCGTCGCTGCTAGTGGCTGTGAGCATCATCTTCTCCATCATGGCTTATTTCTACACCTACATAGACCCAGCTGAGATTGAGGCCCAAATCAAGAAACAGCAGGGACTCGAGCCAGAAGAGACAGAGAAGGGGGCGCTAGAAATGGAGGAAAAAGATGAAGACCAGAAAAATGAACAGGAGGTCAAACAAACCAAGATATGAGAGATTTGTGAAGATTATGCTAATATCTACTTTAGtgccatatttattaaaatacttataAATGATGATATTTTCATCCATCGTTGTTAAAATCATTGTCACCGTTGGGTGAAAGACCCCCACTTAGTGAATCAGATGTagcaagaaaaatgttaaaactttcTGTCGTGATATCTTTAGGTATGGTTTATGATCCAGATGGACTCTGGttagtgttttgtgtgtgatttgttGCATCT

Function

NR:

description
solute carrier family 15 member 1

GO:

id name namespace
GO:0006857 oligopeptide transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K14206 SLC15A1, PEPT1; solute carrier family 15 (oligopeptide transporter), member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248520.1 True 2429 mRNA 0.48 23 4860892 4869233

Neighbor

gene id symbol gene type direction distance location
stk24a stk24a,LOC107560805,LOC107747230,LOC107670316,LOC107561729,LOC107689524,LOC107752612,LOC107705591,LOC103357793 coding downstream 1226 4852949 ~ 4859666 (-)
casp10 LOC107560797,LOC107561720 coding downstream 69153 4781700 ~ 4791739 (-)
prkra LOC107747227,LOC107670311,LOC107560808,LOC107561731,LOC107689486 coding downstream 80215 4774995 ~ 4780677 (-)
nfe2l2a nfe2l2a,LOC107716922,LOC107725823,LOC107671308,LOC107657385 coding downstream 289776 4557126 ~ 4571116 (-)
evx2 evx2,evx2a,LOC107657379,LOC107671304 coding downstream 489301 4367160 ~ 4371591 (-)
zmp:0000001200 dock9,LOC107689489 coding upstream 959 4870192 ~ 4921556 (-)
LOC122351620 rap2a,LOC100332969,LOC103043765,LOC107549783,LOC103391592,LOC105907999,LOC106512668,LOC106582448 coding upstream 108426 4977659 ~ 4985596 (-)
tmem37 tmem37,LOC107752614,LOC107689494,LOC107747239,LOC107670320,LOC107560813 coding upstream 138952 5008185 ~ 5009514 (-)
steap3 steap3,LOC107689493,LOC107747243,LOC107549780,LOC107752579 coding upstream 147835 5017068 ~ 5022355 (-)
insig2 insig2,LOC107549777,LOC107689500,LOC107720943,LOC107670326,LOC107549914,LOC107752584 coding upstream 252974 5122207 ~ 5128098 (-)
G67747 NA non-coding downstream 224550 4636010 ~ 4636342 (-)
G67730 NA non-coding downstream 305142 4552424 ~ 4555750 (-)
G67733 NA non-coding downstream 309017 4551237 ~ 4551875 (-)
G67712 NA non-coding downstream 433246 4427288 ~ 4427646 (-)
G67710 NA non-coding downstream 436594 4423977 ~ 4424298 (-)
G67847 NA non-coding upstream 75370 4944603 ~ 4954082 (-)
G67904 NA non-coding upstream 136061 5005294 ~ 5006781 (-)
G67911 NA non-coding upstream 157811 5027044 ~ 5027597 (-)
G67913 NA non-coding upstream 181196 5050429 ~ 5051292 (-)
G67923 NA non-coding upstream 219949 5089182 ~ 5089393 (-)
LOC122351499 LOC107670334,LOC107747232 other downstream 37927 4792424 ~ 4822965 (-)
pde11a pde11a,LOC107657382,LOC107671328 other downstream 194238 4615842 ~ 4666654 (-)
wipf1a LOC107657348,LOC107600727 other downstream 710653 4142290 ~ 4150239 (-)
G67668 NA other downstream 738789 4120463 ~ 4122103 (-)
dgkh dgkh,LOC107713732,LOC107549907 other downstream 1353600 3437756 ~ 3507292 (-)
G67863 farp1,LOC107747234,LOC107670305,LOC107689492,LOC107752600,LOC107549748,LOC101883674 other upstream 90484 4959717 ~ 4983747 (-)
dbi dbi,LOC107560815,LOC107747240,LOC107752581 other upstream 141280 5010513 ~ 5014813 (-)
G67912 NA other upstream 159693 5028926 ~ 5029475 (-)
G67930 LOC107670337 other upstream 236661 5105894 ~ 5108387 (-)
LOC122351925 NA other upstream 480722 5349955 ~ 5369589 (-)

Expression


Co-expression Network