XLOC_006562 (AL954359.2)


Basic Information

Item Value
gene id XLOC_006562
gene name AL954359.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 20217490 ~ 20222134 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012693
AAACAAACGCAGTTTCTTAACGGTCGTTTAGCAATCTTTTGTCCGTTTTGTCTCCTTATTTCGGTCGCGAAATGAAGATAAAATACGTGTTTGTTGATATATTAACTGTAAATGCCATTCACATATGAACACTAACGTACCacagttaaaataaaaagtcacggTCAAAGGACAAAAGAGAGGGCTACGTTTTTTGGAGAAGCTGGACCATTTTGACCTTATCATCTTCAGCGGTATAATTCAGCGAAATCAATGATGTGCAGGGGTTTAAAAAGTACAGCTTGGGAAATATAAAGATGATGGTTATTTTAAAGAAGAAGCCTGACACATTGGAGACTTAACCATCTTCAAAGGACAATGCTACAATTCAAGGAAGTCGACAGTTGTCTCAATTATACAGTTTTGCCTTTTTTTGTACCATAGTCTAAGTTTGTATTTTGATTGCCTAGAAGGTAATCGTTTACATCACTTTGGGAGAGGGAGTGAAAACGGGCAGTCAATCAGTGTCTGAAAAGAGAAAATACACCCAATACAGAGGCTAGTAAGGAGCACTTCCAGTGCACAAAGTTAATGTCTTAACAGATTACAAGATCAAGTCATTAACATGAACCAAAAGGACAAACTCGTCAAAAGCAAAACTCACTTTCCCTTGGCTTTTCTTTCCCTTTTCATCacgggtcatcacagcagaatgaactagcAATTACTGTGGTACATGCTTTTTTCACCAGATGCTCTCATATGCAGAATTGACCAGAGCAccggaaggaaacccacgcaaacatggggtgaacatgcaaactccacacctgGCACacctgagactcgaaccagtgaccttcttgctttgaggcaacagtgatgACCACGGAGCTACCATGTGGCCCCTTTTGTATTCACATTATATTAGTGACAGTTTTCCCCTCAAG
>TCONS_00012694
ATTCGCGGCAACGCGCGCGTTGTCCTGACAACAAGGATTCACAAACAAACGCAGTTTCTTAACGGTCGTTTAGCAATCTTTTGTCCGTTTTGTCTCCTTATTTCGGTCGCGAAATGAAGATAAAATACGTGTTTGTTGATATATTAACTGTAAATGCCATTCACATATGAACACTAACGTACCacagttaaaataaaaagtcacggTCAAAGGACAAAAGAGAGGGCTACGTTTTTTGGAGAAGCTGGACCATTTTGACCTTATCATCTTCAGCGGTATAATTCAGCGAAATCAATGATGTGCAGGGGTTTAAAAAGTACAGCTTGGGAAATATAAAGATGATGGTTATTTTAAAGAAGAAGCCTGACACATTGGAGACTTAACCATCTTCAAAGGACAATGCTACAATTCAAGGAAGTCGACAGTTGTCTCAATTATACAGTTTTGCCTTTTTTTGTACCATAGTCTAAGTTTGTATTTTGATTGCCTAGAAGGTATTTCttattaaagaaaatatatatatatatatatatatatatatatatatatatattttttttttttttttttctttttttatatatatattat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094423

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012693 False 929 processed_transcript 0.40 4 20217490 20222092
TCONS_00012694 True 591 processed_transcript 0.32 2 20220541 20222134

Neighbor

gene id symbol gene type direction distance location
XLOC_006561 fam204a coding downstream 417666 19766896 ~ 19799824 (-)
XLOC_006560 rab11fip2 coding downstream 575202 19610562 ~ 19642288 (-)
XLOC_006559 NA coding downstream 860479 19350851 ~ 19357011 (-)
XLOC_006558 NA coding downstream 878054 19338477 ~ 19339436 (-)
XLOC_006557 NA coding downstream 940158 19276173 ~ 19277332 (-)
XLOC_006563 AL954359.1 coding upstream 4911 20227045 ~ 20231750 (-)
XLOC_006564 si:ch211-270n8.1 coding upstream 157258 20379392 ~ 20381485 (-)
XLOC_006565 gfra1a coding upstream 170522 20392656 ~ 20519001 (-)
XLOC_006566 si:ch1073-126c3.2 coding upstream 313025 20535159 ~ 20540790 (-)
XLOC_006567 CU633804.1 coding upstream 324833 20546967 ~ 20547498 (-)
XLOC_006471 BX537274.2 misc downstream 9952585 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 19391265 825904 ~ 826225 (-)
XLOC_006556 NA non-coding downstream 1200657 19010172 ~ 19016833 (-)
XLOC_006554 CR932361.2 non-coding downstream 1502064 18715310 ~ 18715426 (-)
XLOC_006568 NA non-coding upstream 507700 20729834 ~ 20731888 (-)
XLOC_006569 NA non-coding upstream 854518 21076652 ~ 21079411 (-)
XLOC_006570 NA non-coding upstream 923980 21146114 ~ 21147382 (-)

Expression


Co-expression Network