CI01000000_02496792_02498535


Basic Information

Item Value
gene id CI01000000_02496792_02498535
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 2496744 ~ 2498594 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_02496792_02498535.mRNA
GTTTAAATGACTAAATGTGAATTATAATAGAACCAGTTAACTGACACAATGACTGATAATGTACTTGGAATCAAAATCAGATTGCTCATCCAACACATTAAAAGAGACTATCAATCAGAGCATGTGTTTCACTGGCAAGCAACAATTATGGGACCTGTTGCATTCACCACAAGAATTTATCACCCAAATATTAACAGTAATGGAAGCATCTGTTTGGATATTCTAAGGTCTCAGTGGTCTCCTGCGTTAACTATCTCTAAAGTTCTATTGTCCATCTGCTCACTGTTATGTGATCCAAACCCAGATGATCCATTAGTGCCAGAGATAGCACGTATCTATAAAACAGACAATGAAAAGTAAGTGTATTTGTTTGTCTTAAGTGAAATGTTTAAAATTAAATCTTAAAAAAAAGTTCATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_02496792_02498535.mRNA True 419 mRNA 0.34 4 2496744 2498594

Neighbor

gene id symbol gene type direction distance location
CI01000000_02334112_02352906 NA coding upstream 143832 2333555 ~ 2353369 (+)
CI01000000_02237986_02243555 NA coding upstream 252924 2237694 ~ 2243820 (+)
CI01000000_02092375_02096188 POLR2B.L, RPB2, POLR2B coding upstream 400556 2092293 ~ 2096188 (+)
CI01000000_02080057_02086228 REST coding upstream 409234 2079831 ~ 2087510 (+)
CI01000000_02018856_02033091 EXOSC3 coding upstream 462365 2018597 ~ 2034379 (+)
CI01000000_02516813_02517287 NA coding downstream 18219 2516813 ~ 2517787 (+)
CI01000000_02534790_02541012 NA coding downstream 36196 2534790 ~ 2541023 (+)
CI01000000_02553141_02553901 NA coding downstream 54181 2552775 ~ 2554149 (+)
CI01000000_02571143_02579505 NA coding downstream 72549 2571143 ~ 2579505 (+)
CI01000000_02586043_02587730 DGKQ coding downstream 87449 2586043 ~ 2587799 (+)
G1475 NA non-coding upstream 147079 2348793 ~ 2349665 (+)
G1470 NA non-coding upstream 190079 2306406 ~ 2306665 (+)
G1448 NA non-coding upstream 218104 2278390 ~ 2278640 (+)
G1439 NA non-coding upstream 228148 2268384 ~ 2268596 (+)
G1509 NA non-coding downstream 92543 2591137 ~ 2595445 (+)
CI01000000_02639274_02651177 DDX41 non-coding downstream 152171 2639274 ~ 2651578 (+)
G1604 NA non-coding downstream 201080 2699674 ~ 2699896 (+)
G1617 NA non-coding downstream 263747 2762341 ~ 2762558 (+)
G1645 NA non-coding downstream 329777 2828371 ~ 2828613 (+)
G579 NA other upstream 587936 1767917 ~ 1908808 (+)
G435 NA other upstream 1063890 1425121 ~ 1432854 (+)
G350 NA other upstream 1819807 671842 ~ 676937 (+)
G252 NA other upstream 1989672 503209 ~ 507072 (+)
G2774 NA other downstream 1955184 4453778 ~ 4454232 (+)
G2850 NA other downstream 2227392 4725986 ~ 4726482 (+)
G6811 NA other downstream 7706237 10204831 ~ 10321679 (+)
G6820 NA other downstream 7928629 10427223 ~ 10433018 (+)
G7018 NA other downstream 8479895 10978489 ~ 10980872 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00017961 UBE2D2,ube2d1,LOC105010898,LOC105015883,LOC105029919 coding CM030131.1 CM030131.1 30456550 ~ 30459622 (+)