casp10 (LOC107560797,LOC107561720)


Basic Information

Item Value
gene id casp10
gene name LOC107560797,LOC107561720
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 4781700 ~ 4791739 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248535.1
AAACGAAACTAACTTCAGTAAGGAAGTGGCCTAGAGGAGGAGGCGTGTCTAAACACTTAGATATGTCGAGGAGAAAGTAGGCTAATGTTGAAGATAGCTCAAATTTTCACACCGGGAAGGACGAGGCTGCTGTCGGAGATGCAGGCGGGTTTGGAGTTTCAGCGGGTGCTGTTAAAGGTGCAGGAGTCTCTGTCTGTGGATGAGGTGCAGGACTTGGTGTTCCTCTGCTCTGAACTACTGAGTCTGAAAGACCTGAGCTCTGTGAGCTCGGCCGGACAGCTCTTCGGTCTCCTGGAGAACAGGGAGCTGCTGTCCAGGGAGGATCCGTCTCTGCTGCTAGAGCTGCTCAGGATCCTGAGACACAACAGCCTGATCCGCAGTCTGACCTCAGAGGACTTCATGACAACCAACGGCACGACATATAGCCCACAGATCTCTCCATACAGACAGATGTTGTTTGAGCTGTCAGAGTCCATCTGTGAGCAGGACctgaaaaacatcaaattcctCTTGTTTAAAACGCTACCCCGTAAAAAGCTGGAGAAGGACATGACGCTCTTGCAGTTGTTTCTGGAgatggagaaggaggccctTTTGGATGACAATCATTTGGACGTCCTGCAGAAAATTATAGCAGAGATCAACCCAAGATTAGAAAAAAGAATCATTCAATACAAAGAGAAGAGTTGTGAGAGTGGAATGGTTATTGCTCAGGAGATCGGGGATATTACTCCAGCGTTGTACTCACCTGCTCCGCCCTCGTCGCCGACGTCACTTACATCAGTTGACAGAATGGAGGAGCGGGTGAACAGGCTCAGTCTGACCGAAGATCAGAGCCAGCACTCAGTGGTGGAAAACGAGAGCTTAAAAAAGTGCTTGATTGGAACCCAAAAGCCTGAGACGCTGCAGCGAGAAAACAGAAGATCAGAGTGGAGATGGAAAGCAATCACCGAAGACGCAGGCTACTACTTCTGCAGAGAAAGCACTTCCTGCTACAGGATACAGTCATCAGAGAGGAAAATAAGATGCATCCAGCAGTATGAGATGAAGGGGGACAAGAGAGGAACGTGTCTGATCATCAACAACTGTGACTTCAAAAACAGTCTACGGAAAAGAGAAGGAACAGACATTGACAAAAGAAGTCTAGAGGTCGTGTTCCAGTGGCTGGGCTTCGAGGTCCTGGTCAAACAGAACTGTGAAGGCCATCAGATCCTGCAGGAGCTGAGGGACCTGGCCGCTCGTGACCACACGTCAGCGGATTGCGTGGTGTGCTGCGTGCTGAGCCACGGACAAATAAAAGGCATCTTCGGGGTTGATGAAGAGATTGTCAACTATAGGGAGCTGATAGAGACCCTGAGTCCAAATCATTGCCCTTCTCTCTTCAATAAACCCAAACTGTTCTTCATCCAGGCCTGCAGGGGAAACGAAGATCAGCCAGCGGCATTTCCTCTCATTTTCCCAGATGATGAGGTCACGCCGGTCAGCGATGCAGCTGTACCCATAGACTCCATACCTGAGATGGCAGACTACCTGTTAGCCATGTCCACTGTGCCACACTACGTCTCATACAGGGAAAAAGACAAAGGAACCTGGTTCATACAGTCCCTCTGCCACAACCTGAAGCTGCTGGTGCCAAAGGGTATCGATCTACTCTCCATTCTGACTCAGGTGAACAGCGACGTGAGCAAAAAGACGGACAAAAGCGGTTTGAAGAAGCAGATGCCGCAGCCAGAGTTCACCCTCACTAAGAGAGTGGTTTTCCCTCTACCCAAAACCCCTCTTTAATAATGTCCCGCTGTCAGCATACACAGAGATGTTTACATGACCTGAATGTGTCGATCGTAAATGTGAGGAAATACTACGTGCAAAAAATTGATTTGTTAAATCATAGCTTCAACGACACACAGTGAGCTCAAGCCCCAGATGAGCTCGATACCATCTACGCAATTTACATTAAACTTGAATAGTTTTCTACATTTTCTCAGGTAGGGCATGAGCACGTATCGCCATATAGTGACCAGATAcaagaataaatgatttttgtaaCCGTTTACAAGTTTTCAGCGATGTCGTACTGTTCATCATGATTGTAAATAGACAATAAATTATCACATTCGCCCAAAAAACAGAGCTGATCATGTTTCTGCTGGGGCAAAGTCTATGTTTGCATGTTTGTATCTGTCTAAGAGGTACAGTGCACTTGTTTGTTTCTCTGCTGTAACCAGCAgcttattaatcaaataataacatTTGAAGGCACAGGGAAAGCCTGCTACTGTTGCGTATTGCCTTTTGCACTCCATAAATACTGCACTTGCACTCaactcaataaaataaaaattgtagtAGCTAGGAATACtttaaattcattacatttttaaatcgcGTGACCAAAGCTGGATAGTAACTAAATTACACACAATCAGTATTAAATAATCAAGTTCTGAAATATATAGTTTAAGATCAGTTAGTGCAAGTTTCCTTTAGTTGAAACAGCTCATAGTCTGGGTACCTGAAACCAGGGGATAGATGCACAAATTcatgctctttcttttttcctttttccacgCAGCACATGGATTCCCAGAGTTGTTGTCATTAAAATTCTTTCACCTAATATGTTTACTTGAAGCACCctgagattttaaataaatattgtaattatctCACTTGCATGTTCATGATTCTCTGGCGTTGGTTAATGATTGCATGtcacattttttatgatttcattaaCTTTTCATTAAACTCTGAAACCCGCTGAAGTTAATTTACGAACTTCTGTTTGTAAAACTTTGTGaatgtaatgttatatttaatgctGTTAGTAGGAATAAAACAGAATCTACTTTCTTGTA

Function

NR:

description
PREDICTED: caspase-8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248535.1 True 2858 mRNA 0.44 12 4781700 4791739

Neighbor

gene id symbol gene type direction distance location
prkra LOC107747227,LOC107670311,LOC107560808,LOC107561731,LOC107689486 coding downstream 1023 4774995 ~ 4780677 (-)
nfe2l2a nfe2l2a,LOC107716922,LOC107725823,LOC107671308,LOC107657385 coding downstream 210584 4557126 ~ 4571116 (-)
evx2 evx2,evx2a,LOC107657379,LOC107671304 coding downstream 410109 4367160 ~ 4371591 (-)
lnpa lnpk,lnpa,LOC107742983,LOC107657390,LOC107725829,LOC107600748,LOC107671324,LOC107588227 coding downstream 419731 4351702 ~ 4361969 (-)
atp5mc3a atp5g3a,atp5g3,LOC108424356,LOC107739460,LOC108266717 coding downstream 559433 4218896 ~ 4222267 (-)
stk24a stk24a,LOC107560805,LOC107747230,LOC107670316,LOC107561729,LOC107689524,LOC107752612,LOC107705591,LOC103357793 coding upstream 61210 4852949 ~ 4859666 (-)
slc15a1a LOC107752613,LOC107689491 coding upstream 69153 4860892 ~ 4869233 (-)
zmp:0000001200 dock9,LOC107689489 coding upstream 78453 4870192 ~ 4921556 (-)
LOC122351620 rap2a,LOC100332969,LOC103043765,LOC107549783,LOC103391592,LOC105907999,LOC106512668,LOC106582448 coding upstream 185920 4977659 ~ 4985596 (-)
tmem37 tmem37,LOC107752614,LOC107689494,LOC107747239,LOC107670320,LOC107560813 coding upstream 216446 5008185 ~ 5009514 (-)
G67747 NA non-coding downstream 145358 4636010 ~ 4636342 (-)
G67730 NA non-coding downstream 225950 4552424 ~ 4555750 (-)
G67733 NA non-coding downstream 229825 4551237 ~ 4551875 (-)
G67712 NA non-coding downstream 354054 4427288 ~ 4427646 (-)
G67710 NA non-coding downstream 357402 4423977 ~ 4424298 (-)
G67847 NA non-coding upstream 152864 4944603 ~ 4954082 (-)
G67904 NA non-coding upstream 213555 5005294 ~ 5006781 (-)
G67911 NA non-coding upstream 235305 5027044 ~ 5027597 (-)
G67913 NA non-coding upstream 258690 5050429 ~ 5051292 (-)
G67923 NA non-coding upstream 297443 5089182 ~ 5089393 (-)
pde11a pde11a,LOC107657382,LOC107671328 other downstream 115046 4615842 ~ 4666654 (-)
wipf1a LOC107657348,LOC107600727 other downstream 631461 4142290 ~ 4150239 (-)
G67668 NA other downstream 659597 4120463 ~ 4122103 (-)
dgkh dgkh,LOC107713732,LOC107549907 other downstream 1274408 3437756 ~ 3507292 (-)
G67358 gpx4a other downstream 1587208 3189847 ~ 3194492 (-)
LOC122351499 LOC107670334,LOC107747232 other upstream 685 4792424 ~ 4822965 (-)
LOC122351456 LOC107747234,LOC107560802,LOC107670305,LOC107752600,LOC107689492,LOC107549748,LOC101883674 other upstream 64911 4856650 ~ 4973955 (-)
G67863 farp1,LOC107747234,LOC107670305,LOC107689492,LOC107752600,LOC107549748,LOC101883674 other upstream 167978 4959717 ~ 4983747 (-)
dbi dbi,LOC107560815,LOC107747240,LOC107752581 other upstream 218774 5010513 ~ 5014813 (-)
G67912 NA other upstream 237187 5028926 ~ 5029475 (-)

Expression


Co-expression Network