LOC122351462 (LOC107549895,LOC107689504,LOC107720938,LOC107752607,LOC107549742)


Basic Information

Item Value
gene id LOC122351462
gene name LOC107549895,LOC107689504,LOC107720938,LOC107752607,LOC107549742
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5874669 ~ 5875367 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248540.1
ATGCCACTTACCTCTGAGCTAACAAAACATGTCTGCAACCATCTTGGACTTTATGACCCCCCTCCTGCTGAAAAAGTCTTGGAGAACCTCTCAGCACTGAGATCAATGGCCAACCCAAATTCAGATTTTCAGTTTAAAACCAAGCTGCACAGTATCTATAAATTCATGCAGGACAACAAGACAAACTTCAGAGATTTATTGGGCACAAATGGCATTCCCTGGATCTGGAATAAAAGTGAGTTTGTCTGTCCAGAAGATATAGTTTTAACCTATCCACCTGAACTGGATCTAAGCCCTTACGTAAAGAAAGTGCCTGAAGAGTTTTTGCAGTATGAAAGCCTGCTAACACAATTTGGTGTAAGGAAAACAATGTCTGATGAGGAAATTGAAGATATACTTCATGACATAAAACATAGAATTGACTACAGGCGTCCTCCTCATGGAGACTCAACAGAACTTAAAGTGTCCATTGCCATTCTTGATTGGATGCGAAGGaatgagaaacatttaaaagacaGCACACCTGTGCCTGTCATGGCAGAAAACCAAAACTTTAATCTGCATTCCTTATCTAAAACAGTCTTCTGTGACATCAGTGCTGAAGGACTAGAAGACCTGAAACAGGACAATGAAGAATTCTATGTCATTCATGTAGAAGTTCTACCCATCACTGCAAGATGGTTGAAAGTCCCATCTTGA

Function

NR:

description
PREDICTED: sacsin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248540.1 True 699 mRNA 0.40 1 5874669 5875367

Neighbor

gene id symbol gene type direction distance location
LOC122351461 si:dkeyp-118h9.7,LOC107689504,LOC107549742,LOC107752607,LOC107549895,LOC107720938 coding downstream 13 5873593 ~ 5874656 (-)
LOC122351910 farp1,LOC107689492,LOC107747234 coding downstream 78520 5766330 ~ 5796149 (-)
myo1b myo1b,LOC107748838,LOC107664008 coding downstream 353383 5463314 ~ 5521286 (-)
bzw1b bzw1b,LOC107689509,LOC107549769,LOC107752595,LOC108435180 coding downstream 480122 5391353 ~ 5394547 (-)
LOC122351922 NA coding downstream 525566 5346160 ~ 5349103 (-)
LOC122351923 LOC107549895,LOC107549742,LOC107689504,LOC107752607,LOC107720938 coding upstream 107 5875474 ~ 5876391 (-)
LOC122351906 LOC107670338,LOC107721263 coding upstream 13526 5888893 ~ 5899643 (-)
LOC122351270 LOC107730457,LOC107549918,LOC107670341,LOC107752618 coding upstream 99769 5975136 ~ 5978878 (-)
LOC122351466 LOC107670336,LOC107720941 coding upstream 194378 6069745 ~ 6087019 (-)
LOC122351467 abi2,LOC107738105,LOC107752895 coding upstream 213102 6088469 ~ 6098804 (-)
G68082 NA non-coding downstream 68342 5805940 ~ 5806327 (-)
G68055 NA non-coding downstream 138886 5735337 ~ 5735783 (-)
G68053 NA non-coding downstream 139497 5734924 ~ 5735172 (-)
G68048 NA non-coding downstream 159032 5715341 ~ 5715637 (-)
G67917 NA non-coding downstream 693169 5141790 ~ 5181500 (-)
G68120 dip2a non-coding upstream 169748 6045115 ~ 6047596 (-)
LOC122351301 NA non-coding upstream 242484 6117851 ~ 6142682 (-)
G68189 NA non-coding upstream 365955 6241322 ~ 6241602 (-)
G68265 NA non-coding upstream 804728 6680095 ~ 6683011 (-)
G68266 NA non-coding upstream 822319 6697686 ~ 6697893 (-)
LOC122351915 LOC108191338,LOC101883771,LOC101885620 other downstream 474789 5396865 ~ 5399880 (-)
LOC122351925 NA other downstream 505080 5349955 ~ 5369589 (-)
G67930 LOC107670337 other downstream 766282 5105894 ~ 5108387 (-)
G67912 NA other downstream 845194 5028926 ~ 5029475 (-)
dbi dbi,LOC107560815,LOC107747240,LOC107752581 other downstream 859856 5010513 ~ 5014813 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other upstream 37488 5912855 ~ 5931136 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other upstream 167908 6043275 ~ 6043925 (-)
LOC122351979 NA other upstream 223704 6099071 ~ 6099912 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other upstream 371533 6246900 ~ 6261069 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other upstream 1195618 7070985 ~ 7153954 (-)

Expression


Co-expression Network