LOC122351466 (LOC107670336,LOC107720941)


Basic Information

Item Value
gene id LOC122351466
gene name LOC107670336,LOC107720941
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 6069745 ~ 6087019 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248543.1
ATGTGTGAGGAAAGGGTAGAAAAGGACAGCAAGATCAGGGAGGCAGGCCTCTCACAACAGTTCGAGCCGACCTTCGAGAAGGTCAGAcagaggcaaggcaaggcaaggcaagTGTCTTTGTTCCCAAAGGGAGAGCCTGGTTTTGGTCAACCTGGACCTCAAGGTCCTACAGGATTTCCAGGCAGTAAAGGTGCTCCCGGGCCTAAAGGTGATCCTGGTTTTTCTGGAAGCCCTGGTGCACCAGGTCGTCCAGGTCTTGATGGTGCTCCTGGATCTAAAGGTGAACCTGGCTATCCTGGTGGTCCTGGTTCTCGTGGCCCACCTGGGCCACCCGCCTTTGGCCTTCAGGGTCCCCCTGGTCCTCCTGGAGCTCCTGGCTCTATGGGGTCTCCTGGAGTCCCTGGTGCAAATGGAGAGAAAGGAGACCGCGGTCTCCCAGGTTCAAGTTTTCCAGGGTTGCAAGGTGACAGAGGAAGCCCAGGACTTACAGGGCCTCCTGGTCCTTCTGGTCCACCTGGAGGTCCAGGACTACCTGGTCAAGATGGCCTACCAGGGCTGCCTGGGCCTAAGGGAGACATTGGTGGGATGGGTGCTCCAGGGCCTGTAGGTAACCCTGGCAACCCTGGCAGACAAGGCTTTCCAGGACCAAAAGGAGATGATGGTGTCCCAGGAAGATCAGGAAACCCAGGTTTCCCAGGAACAAAGGGAGACAAAGGTGACCCAGGCATTCCAGGCCCACCTGGCATAGGCACACCAGCAGGTCTACTTAAGGGGCAAAAAGGAGAATCTGGAGTTCCAGTGAAATCCTGTCTGGTATTTTCTCTGTGCACACAAGGTTTACCTGGGACTGATGGTCGTCAAGGTGCAGTGGGAAAGACTGGTATCCAAGGAATACCAGGTCTCCATGGGCCACCAGGTCCTAAAGGAGACCCAGGTGCCAGAGGTGAGAGAGGTGAACGGGGGCCTTCAGGTCCTAGTGGTCTTTCTGGTCTGCAAGGACCACCTGGTGAAAAAGGTTCACCTGGACCAAAGGGAGACACTAGTGTTGGCCTTCCAGgGCGCCCAGGACCACAGGGACAAAAGGGAAGTCAAGGACTGACAGGTGTTCCTGGACTTCGGGGTACAAATGGAGAAAAGGGCAGTAAAGGTGATCAAGGCCTGAGGGGAACTCAAGGTCTTAAGGGAGAGAAGGGTGATGTAGGACCCCTGAGTAGCGCCCCTGGTCCTAAAGGAGACCCAGGTGCCAGAGGTGAGAGAGGTGAACGGGGGCCTTCAGGTCCTAGTGGACCTCCTGGTCTACAAGGACCACCTGGAGTAAAAGGTTCACCTGGACCAAAGGGAAACACTGGTGTTGGCCTTCCAGGGCCACCAGGTCAACGGGGAGAAAAGGGAAGTCAAGGATTGTCAGGTGTTCCTGGACTTCGAGGTCCAAATGGAGAAAAGGGCAGTAGAGGTGATCAAgGCCTGATGGGAACTCAAGGTCTTAAGGGAGAGAAAGGTGGTGTAGGACCCCCGAGTAGCACCCCtgGTCCTAAAGGAGACCCAGGTGCCAAAGGTCAGAGAGGAGAGCAGGGGCCTTCAGGTCCTAGTGGACCTCGTGGTCCGATGGGACCTTCTGGTCTCCAAGGACCACCTGGACTAAAAGGTTCACCTGGACCAAAGGGAGACACCGGTGTTGGCCTTCGAGggGTCCCAGGACAACAGGGACAAAAGGGAAGTCAAGGATCTGCagGTGTTCCTGGACTTCGAGGTCCAAATGGAGAAAAGGGCAGTAAAGGTGATCAAGGCCTCAGGGGATCTCAAGGTCTGAAAGGAGCAAAGGGTGATGTAGGACCCCTGAGTAGACCCTCTGctGTGATTCGTTTAGTGGGAGGTTCCAGCCGCGGAAGAGTGGAGGTGCTTCATGAGAATGCCTGGGGAACGGTGTGTGATGACAGCTTTGACACTGTGGACGGTACGGTGGTGTGCAAGATGCTGGGTTTCCAGAGGGCCACTCAGGTGTTCACGGAAGGTGCAGGAACTGGACGTATCTGGCTGGACGAGATGAGATGTACCGGAAATGAGATGAGCATTTTTGACTGTCCACATGGAGGATTCGGAGTTCATAACTGTGGCCACAGTGAAGATGCGGGAGTTAGCTGTgtctgaataaaagaaaaaaacatctcacaCCAAAAATTTTGCTTCTTGACTTTTAGCCAGCTAGTGCTTTTTAGTGCACGTATACCGTCAGTTCTCCTCAAACATATGCAGTTATCAAATTATGAAATTACTGCATAGTAAAACCAAACTTATTGTTGTCAGATGTTCTGCTTGAGAAGTATGCGTGGTGTCATTAAGGCAGCAACATCTATGCATTTCTGAGTTGGATTTATgtgtgccaatatttttggcctatgcactatataaatgtataatcacCACAATAAATTCATCCATGTGTACTGTGCTATCCTAAAACTGTCCTGACATATAACACTCAGacacagcaaaataaatagcttaattttaaaa

Function

NR:

description
PREDICTED: macrophage receptor MARCO-like

GO: NA

KEGG:

id description
K13884 MARCO; macrophage receptor with collagenous structure

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248543.1 True 2514 mRNA 0.52 28 6069745 6087019

Neighbor

gene id symbol gene type direction distance location
LOC122351270 LOC107730457,LOC107549918,LOC107670341,LOC107752618 coding downstream 90867 5975136 ~ 5978878 (-)
LOC122351906 LOC107670338,LOC107721263 coding downstream 170102 5888893 ~ 5899643 (-)
LOC122351923 LOC107549895,LOC107549742,LOC107689504,LOC107752607,LOC107720938 coding downstream 193354 5875474 ~ 5876391 (-)
LOC122351462 LOC107549895,LOC107689504,LOC107720938,LOC107752607,LOC107549742 coding downstream 194378 5874669 ~ 5875367 (-)
LOC122351461 si:dkeyp-118h9.7,LOC107689504,LOC107549742,LOC107752607,LOC107549895,LOC107720938 coding downstream 195089 5873593 ~ 5874656 (-)
LOC122351467 abi2,LOC107738105,LOC107752895 coding upstream 1450 6088469 ~ 6098804 (-)
myo16 myo16,LOC107716764,LOC107688718 coding upstream 232071 6319090 ~ 6477546 (-)
tnfsf13b tnfsf13b,LOC107702981,LOC107688720,LOC107721586 coding upstream 400219 6487238 ~ 6492356 (-)
abhd13 abhd13,LOC107570096,LOC107702974,LOC107688719,LOC107551070 coding upstream 405590 6492609 ~ 6498204 (-)
LOC122352171 fam155a,LOC107716804,LOC107721616,LOC107570097,LOC107702989,LOC107688721,LOC101886421,LOC107735187 coding upstream 414390 6501409 ~ 6599198 (-)
G68120 dip2a non-coding downstream 22149 6045115 ~ 6047596 (-)
G68082 NA non-coding downstream 263418 5805940 ~ 5806327 (-)
G68055 NA non-coding downstream 333962 5735337 ~ 5735783 (-)
G68053 NA non-coding downstream 334573 5734924 ~ 5735172 (-)
G68048 NA non-coding downstream 354108 5715341 ~ 5715637 (-)
LOC122351301 NA non-coding upstream 30832 6117851 ~ 6142682 (-)
G68189 NA non-coding upstream 154303 6241322 ~ 6241602 (-)
G68265 NA non-coding upstream 593076 6680095 ~ 6683011 (-)
G68266 NA non-coding upstream 610667 6697686 ~ 6697893 (-)
G68270 LOC107716762,LOC107688772,LOC107602882,LOC107721583 non-coding upstream 628977 6715996 ~ 6718143 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other downstream 25820 6043275 ~ 6043925 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other downstream 138609 5912855 ~ 5931136 (-)
LOC122351915 LOC108191338,LOC101883771,LOC101885620 other downstream 669865 5396865 ~ 5399880 (-)
LOC122351925 NA other downstream 700156 5349955 ~ 5369589 (-)
G67930 LOC107670337 other downstream 961358 5105894 ~ 5108387 (-)
LOC122351979 NA other upstream 12052 6099071 ~ 6099912 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other upstream 159881 6246900 ~ 6261069 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other upstream 983966 7070985 ~ 7153954 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other upstream 1927430 8014449 ~ 8024672 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other upstream 1989449 8076468 ~ 8094847 (-)

Expression


Co-expression Network