insig2 (insig2,LOC107549777,LOC107689500,LOC107720943,LOC107670326,LOC107549914,LOC107752584)


Basic Information

Item Value
gene id insig2
gene name insig2,LOC107549777,LOC107689500,LOC107720943,LOC107670326,LOC107549914,LOC107752584
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5122207 ~ 5128098 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248554.1
tggctgctgaggCAGCGGGGCGGAAGTACAGCATTATCCACGCTAAAAGGTTTTCTCCTTTCGCCTGCGGGTCCAACATCTCTGTTCAGAGTGAAAGAAACGCCTGTTTAAAACGGCGACAGTGACGGGGATGGTGTGTGATGTCAGCTGACAGCAGCAGACGTAGCTGACGTCCTTCAGTGTCATGGCAGAGGTTTCGTCTCTCAGCGGAGCTCCGAAGCGCCGCGGGCCCTACATCAGCACGATCACCAACCGGACGGCGAACCTGCTGATCCGCGCCGCCATGCTCTTTACGGTGGGCGTCTTCCTAGCGCTCGTGCTAAACCTGCTACAGGTGCAGCGTAACGTCACTCTCTTCCCTCCGGACGTCATCAGCAGCATTTTCTCCTCCGCCTGGTGGGTTCCTCCCTGCTGTGGAACAGCTGCAGCGTTGATAGGTTTGCTGTATCCCTGTATGGATCATCGTCTGGGGGAGCCGCATAAGCTCAAGAGAGAGTGGTCTAACGTGATGCGCTGTGTGGCCGTCTTTGTGGGCATAAATCATGCCAGTGCTAAGGTGGACTTTGCGAATAATGTGCAGCTGTCGCTGACGCTGGCTGCCTTGTCCGTCGGCCTGTGGTGGACGTTCGATCGCTCACGCAGTGGTTTTGGGCTGGGAGTCATCATCGCTATACTCGCCACACTTGCCACCCAGCTGCTGGTTTACAACGGAGTCTTTCAATATACCTCCCCTGACTTCCTGTACATTCGGTCCTGGCTGCCGTGTATCTTCTTCGCCGGGGTCATAACTGTGGGGAATATCGGACGACAGCTAGCTCTGTACGAGTACAAAGTCAGTCAGGAAAAGAGCCACCAGGATTAAGGAAGAGTCCTCTGCACACATGGGAAAATCCTGGATGAAGAAGTGAAGCACCATCACTGACAGAGCAATCCATCATCGAGGAGCTGCTCTCTGTGTTTGAGGACGGACAGTGTTACAATCTATACCTCCAGATCGGTTTTCCGTCTCCTCCAACGCTCAGgttctgtaagtgtgtgtaactgttcacacacactcatactgtCTTCTCCAGCGCTGAAATGCTGCTGCAAAGTGCCAAACTGACTCTGGAGGCAAAGCCTGGTGCGTAAATGACTGACcgaacatttacatgcatttcatGACACAAAACTCGGCCACATGAAATGTTCTACACGATCTCCCTGCTGTCGTGGCCTCTGTCCTCTGGGACGGGTGGAGGAGAGTCGTCTGGACAAAGCACCGTCATCGGATCTCATTCATCGTGCAGAAAAATCCCTAGTCAGAAGAAAGGAGAGAGATGTAGAGTATTACGACAGGCCTTCAGATCCCTCATCACTTTACTAAAGGGCAGTTGACTTCCGCACCGTCTCAGATCCACCACTAGTGGGCCTCAGAGGATAACTGTGTTTGTAGATGCGGCCAGAAACATTTCCTAACAGACTAACCAGTGTGCTGTGTCCGTCAGTTGGACAAGGTGTGGATTAGGCTTTGGTTACGACATactctatattatattatactttcTTGTAACGTATTCCTCGTTATAGCCAGGCCTGCCTTTCCCAAAATCATCGTGGCTCTGTTGGTTTGAATGGGTTCAGGACGTGCTTTAGCTTGCAATGCTTTCGGGAAACGCGGCTTTGATCGACCCTTCCTAGACCTGAAGAACTCATCCGTTTTGACTGAATAAAGCATCCCTTAGCTCCAGAAAGctctgatttaaaatgtttcaaaacaaaattcaGATGCTTCTTAATGACCGATCTTTACCAAAGCCTTAATTAACTTCAAGATAACGGATAGATGGGAGCTCAGAGTAAAGAGGGTAGAGCAGGCCAACCACCATCTGTGCACTGACTTTGGATAAATTAAGggagtttttgttttgtttttttaatctcgGTGCATTTTATTGGGAGGATATTTTGAGTCGGATGCAAAATAAGTGGGatcagtgtgtttttaagtgTTACAATGAGACTTAAACAATGGTAGGCTTGTAAGAGGAACTGTACAGATCTGAAAGCGAGCATGTTTTCTCACGCATGGGTGATTACTTGATCCGCACTTGTGTTCAACCACATTTACTGTTTTTTGAAGTTACatgattgttgttattattacatcTGCATTATTAAAAGAGACTTTCTTTTGA

Function

symbol description
insig2 Predicted to enable lipid binding activity. Predicted to be involved in several processes, including SREBP signaling pathway; SREBP-SCAP complex retention in endoplasmic reticulum; and cholesterol biosynthetic process. Predicted to act upstream of or within cholesterol metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of SREBP-SCAP-Insig complex. Predicted to be active in endoplasmic reticulum. Orthologous to human INSIG2 (insulin induced gene 2).

NR:

description
Insulin-induced gene 2 protein

GO:

id name namespace
GO:0008203 cholesterol metabolic process biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248554.1 True 2177 mRNA 0.49 6 5122207 5128098

Neighbor

gene id symbol gene type direction distance location
steap3 steap3,LOC107689493,LOC107747243,LOC107549780,LOC107752579 coding downstream 99852 5017068 ~ 5022355 (-)
tmem37 tmem37,LOC107752614,LOC107689494,LOC107747239,LOC107670320,LOC107560813 coding downstream 112693 5008185 ~ 5009514 (-)
LOC122351620 rap2a,LOC100332969,LOC103043765,LOC107549783,LOC103391592,LOC105907999,LOC106512668,LOC106582448 coding downstream 136611 4977659 ~ 4985596 (-)
zmp:0000001200 dock9,LOC107689489 coding downstream 200651 4870192 ~ 4921556 (-)
slc15a1a LOC107752613,LOC107689491 coding downstream 252974 4860892 ~ 4869233 (-)
ybey ybey,LOC107670327,LOC107720944,LOC107689501,LOC107752586 coding upstream 10016 5138114 ~ 5139999 (-)
LOC122351912 LOC107670332,LOC107549921,LOC107689507,LOC107752589,LOC107549740 coding upstream 169408 5297506 ~ 5319587 (-)
LOC122351913 LOC107670336,LOC107720941 coding upstream 195631 5323729 ~ 5341221 (-)
LOC122351922 NA coding upstream 218062 5346160 ~ 5349103 (-)
bzw1b bzw1b,LOC107689509,LOC107549769,LOC107752595,LOC108435180 coding upstream 263255 5391353 ~ 5394547 (-)
G67928 NA non-coding downstream 21430 5099906 ~ 5100777 (-)
G67923 NA non-coding downstream 32814 5089182 ~ 5089393 (-)
G67913 NA non-coding downstream 70915 5050429 ~ 5051292 (-)
G67911 NA non-coding downstream 94610 5027044 ~ 5027597 (-)
G67904 NA non-coding downstream 115426 5005294 ~ 5006781 (-)
G67917 NA non-coding upstream 13692 5141790 ~ 5181500 (-)
G68048 NA non-coding upstream 587243 5715341 ~ 5715637 (-)
G68053 NA non-coding upstream 606826 5734924 ~ 5735172 (-)
G68055 NA non-coding upstream 607239 5735337 ~ 5735783 (-)
G68082 NA non-coding upstream 677842 5805940 ~ 5806327 (-)
G67930 LOC107670337 other downstream 13820 5105894 ~ 5108387 (-)
G67912 NA other downstream 92732 5028926 ~ 5029475 (-)
dbi dbi,LOC107560815,LOC107747240,LOC107752581 other downstream 107394 5010513 ~ 5014813 (-)
G67863 farp1,LOC107747234,LOC107670305,LOC107689492,LOC107752600,LOC107549748,LOC101883674 other downstream 138460 4959717 ~ 4983747 (-)
LOC122351456 LOC107747234,LOC107560802,LOC107670305,LOC107752600,LOC107689492,LOC107549748,LOC101883674 other downstream 148252 4856650 ~ 4973955 (-)
LOC122351925 NA other upstream 221857 5349955 ~ 5369589 (-)
LOC122351915 LOC108191338,LOC101883771,LOC101885620 other upstream 268767 5396865 ~ 5399880 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other upstream 784757 5912855 ~ 5931136 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other upstream 915177 6043275 ~ 6043925 (-)
LOC122351979 NA other upstream 970973 6099071 ~ 6099912 (-)

Expression


Co-expression Network